RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 DOT1LQ8TEK3 1739 aa10.84□□□□□ -0.67
LMO3-226ENST00000541589 KLRG1Q96E93 195 aa10.83□□□□□ -0.68
LMO3-226ENST00000541589 TERF2IPQ9NYB0 399 aa10.83□□□□□ -0.68
LMO3-226ENST00000541589 A0A1W2PP64 1363 aa10.83□□□□□ -0.68
LMO3-226ENST00000541589 LTN1O94822 1766 aa10.83□□□□□ -0.68
LMO3-226ENST00000541589 CD163L1Q9NR16 1453 aa10.83□□□□□ -0.68
LMO3-226ENST00000541589 STK25O00506 426 aa10.82□□□□□ -0.68
LMO3-226ENST00000541589 NME9Q86XW9 330 aa10.82□□□□□ -0.68
LMO3-226ENST00000541589 IP6K1Q92551 441 aa10.82□□□□□ -0.68
LMO3-226ENST00000541589 STK24Q9Y6E0 443 aa10.82□□□□□ -0.68
LMO3-226ENST00000541589 MON2Q7Z3U7 1717 aa10.82□□□□□ -0.68
LMO3-226ENST00000541589 HDGFL2Q7Z4V5 671 aaPredicted RBP10.81□□□□□ -0.68
LMO3-226ENST00000541589 MORC1Q86VD1 984 aa10.81□□□□□ -0.68
LMO3-226ENST00000541589 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
LMO3-226ENST00000541589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.81□□□□□ -0.68
LMO3-226ENST00000541589 WWC3Q9ULE0 1092 aa10.81□□□□□ -0.68
LMO3-226ENST00000541589 WDR90Q96KV7 1748 aa10.81□□□□□ -0.68
LMO3-226ENST00000541589 ST18O60284 1047 aa10.81□□□□□ -0.68
LMO3-226ENST00000541589 TNS4Q8IZW8 715 aa10.81□□□□□ -0.68
LMO3-226ENST00000541589 SLAIN1Q8ND83 568 aa10.81□□□□□ -0.68
LMO3-226ENST00000541589 ZCRB1Q8TBF4 217 aaKnown RBP10.81□□□□□ -0.68
LMO3-226ENST00000541589 RBM46Q8TBY0 533 aaKnown RBP10.81□□□□□ -0.68
LMO3-226ENST00000541589 C5P01031 1676 aa10.8□□□□□ -0.68
LMO3-226ENST00000541589 PCNTO95613 3336 aa10.8□□□□□ -0.68
LMO3-226ENST00000541589 FAM208AQ9UK61 1670 aaKnown RBP10.8□□□□□ -0.68
LMO3-226ENST00000541589 HMGB2P26583 209 aaKnown RBP10.8□□□□□ -0.68
LMO3-226ENST00000541589 HTRA3P83110 453 aa10.8□□□□□ -0.68
LMO3-226ENST00000541589 WDR43Q15061 677 aaKnown RBP eCLIP10.8□□□□□ -0.68
LMO3-226ENST00000541589 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
LMO3-226ENST00000541589 NMRK2Q9NPI5 230 aa10.8□□□□□ -0.68
LMO3-226ENST00000541589 MEGF6O75095 1541 aa10.79□□□□□ -0.68
LMO3-226ENST00000541589 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
LMO3-226ENST00000541589 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
LMO3-226ENST00000541589 TOGARAM1Q9Y4F4 1720 aa10.78□□□□□ -0.68
LMO3-226ENST00000541589 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
LMO3-226ENST00000541589 TAF1LQ8IZX4 1826 aa10.77□□□□□ -0.68
LMO3-226ENST00000541589 PALLDQ8WX93 1383 aa10.77□□□□□ -0.68
LMO3-226ENST00000541589 NEFLP07196 543 aa10.77□□□□□ -0.69
LMO3-226ENST00000541589 FSTL1Q12841 308 aa10.77□□□□□ -0.69
LMO3-226ENST00000541589 LTV1Q96GA3 475 aaPredicted RBP10.77□□□□□ -0.69
LMO3-226ENST00000541589 BOLA1Q9Y3E2 137 aa10.77□□□□□ -0.69
LMO3-226ENST00000541589 PXDNLA1KZ92 1463 aa10.77□□□□□ -0.69
LMO3-226ENST00000541589 C4BP0C0L5 1744 aa10.77□□□□□ -0.69
LMO3-226ENST00000541589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
LMO3-226ENST00000541589 SMIM5Q71RC9 77 aa10.76□□□□□ -0.69
LMO3-226ENST00000541589 ADAMTS8Q9UP79 889 aa10.76□□□□□ -0.69
LMO3-226ENST00000541589 NUDCQ9Y266 331 aa10.76□□□□□ -0.69
LMO3-226ENST00000541589 EDC4Q6P2E9 1401 aaKnown RBP10.76□□□□□ -0.69
LMO3-226ENST00000541589 KIF20BQ96Q89 1820 aa10.76□□□□□ -0.69
LMO3-226ENST00000541589 SLC34A2O95436 690 aa10.75□□□□□ -0.69
LMO3-226ENST00000541589 HOXC9P31274 260 aa10.75□□□□□ -0.69
LMO3-226ENST00000541589 FBXO22Q8NEZ5 403 aa10.75□□□□□ -0.69
LMO3-226ENST00000541589 AK7Q96M32 723 aa10.75□□□□□ -0.69
LMO3-226ENST00000541589 TMEM121BQ9BXQ6 578 aaPredicted RBP10.75□□□□□ -0.69
LMO3-226ENST00000541589 SUPT16HQ9Y5B9 1047 aaKnown RBP10.75□□□□□ -0.69
LMO3-226ENST00000541589 KIAA1551Q9HCM1 1747 aa10.75□□□□□ -0.69
LMO3-226ENST00000541589 MAP3K19Q56UN5 1328 aa10.75□□□□□ -0.69
LMO3-226ENST00000541589 UBR3Q6ZT12 1888 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 FYB1O15117 783 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 SSFA2P28290 1259 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 TGFB2P61812 414 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 C3orf67Q6ZVT6 689 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 CFAP53Q96M91 514 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 MFRPQ9BY79 579 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 KIF13BQ9NQT8 1826 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 PHF14O94880 888 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 GGNBP2Q9H3C7 697 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 C10orf71Q711Q0 1435 aa10.74□□□□□ -0.69
LMO3-226ENST00000541589 TNNT2P45379 298 aaPredicted RBP10.73□□□□□ -0.69
LMO3-226ENST00000541589 MTHFSP49914 203 aa10.73□□□□□ -0.69
LMO3-226ENST00000541589 NBPF6Q5VWK0 638 aa10.73□□□□□ -0.69
LMO3-226ENST00000541589 SMARCC1Q92922 1105 aaPredicted RBP10.73□□□□□ -0.69
LMO3-226ENST00000541589 NBPF4Q96M43 638 aa10.73□□□□□ -0.69
LMO3-226ENST00000541589 BCS1LQ9Y276 419 aa10.73□□□□□ -0.69
LMO3-226ENST00000541589 A0A0G2JLW4 131 aa10.72□□□□□ -0.69
LMO3-226ENST00000541589 MPRIPQ6WCQ1 1025 aa10.72□□□□□ -0.69
LMO3-226ENST00000541589 ARHGAP27Q6ZUM4 889 aa10.72□□□□□ -0.69
LMO3-226ENST00000541589 C16orf71Q8IYS4 520 aaPredicted RBP10.72□□□□□ -0.69
LMO3-226ENST00000541589 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
LMO3-226ENST00000541589 PLEKHG2Q9H7P9 1386 aa10.72□□□□□ -0.69
LMO3-226ENST00000541589 MMP10P09238 476 aa10.71□□□□□ -0.69
LMO3-226ENST00000541589 HSPA1AP0DMV8 641 aaKnown RBP10.71□□□□□ -0.69
LMO3-226ENST00000541589 HSPA1BP0DMV9 641 aaKnown RBP10.71□□□□□ -0.69
LMO3-226ENST00000541589 FBLN1P23142 703 aa10.71□□□□□ -0.69
LMO3-226ENST00000541589 C9orf131Q5VYM1 1079 aa10.71□□□□□ -0.69
LMO3-226ENST00000541589 HS6ST3Q8IZP7 471 aa10.71□□□□□ -0.69
LMO3-226ENST00000541589 NGEFQ8N5V2 710 aa10.71□□□□□ -0.69
LMO3-226ENST00000541589 LINC00116Q8NCU8 138 aa10.71□□□□□ -0.69
LMO3-226ENST00000541589 PCDH11XQ9BZA7 1347 aa10.71□□□□□ -0.7
LMO3-226ENST00000541589 PCDH11YQ9BZA8 1340 aa10.71□□□□□ -0.7
LMO3-226ENST00000541589 G3V3G9 751 aa10.7□□□□□ -0.7
LMO3-226ENST00000541589 CYP27B1O15528 508 aa10.7□□□□□ -0.7
LMO3-226ENST00000541589 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
LMO3-226ENST00000541589 KCPQ6ZWJ8 1503 aa10.7□□□□□ -0.7
LMO3-226ENST00000541589 DPEP1P16444 411 aa10.69□□□□□ -0.7
LMO3-226ENST00000541589 KCNA3P22001 575 aa10.69□□□□□ -0.7
LMO3-226ENST00000541589 AMPHP49418 695 aa10.69□□□□□ -0.7
LMO3-226ENST00000541589 MICALL2Q8IY33 904 aa10.69□□□□□ -0.7
LMO3-226ENST00000541589 USHBP1Q8N6Y0 703 aa10.69□□□□□ -0.7
LMO3-226ENST00000541589 RAPGEF4Q8WZA2 1011 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms