RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 COL15A1P39059 1388 aa17.79■□□□□ 0.44
PRPF19-206ENST00000541371 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
PRPF19-206ENST00000541371 TEFQ10587 303 aa17.79■□□□□ 0.44
PRPF19-206ENST00000541371 C9orf131Q5VYM1 1079 aa17.79■□□□□ 0.44
PRPF19-206ENST00000541371 GAS2L2Q8NHY3 880 aa17.79■□□□□ 0.44
PRPF19-206ENST00000541371 KCPQ6ZWJ8 1503 aa17.78■□□□□ 0.44
PRPF19-206ENST00000541371 GNAT3A8MTJ3 354 aa17.78■□□□□ 0.44
PRPF19-206ENST00000541371 STARD3NLO95772 234 aa17.78■□□□□ 0.44
PRPF19-206ENST00000541371 NFIXQ14938 502 aa17.78■□□□□ 0.44
PRPF19-206ENST00000541371 IL17REQ8NFR9 667 aa17.77■□□□□ 0.44
PRPF19-206ENST00000541371 BRCA1P38398 1863 aaKnown RBP17.76■□□□□ 0.43
PRPF19-206ENST00000541371 A0A087WZG4 1122 aa17.76■□□□□ 0.43
PRPF19-206ENST00000541371 TOMM70O94826 608 aa17.76■□□□□ 0.43
PRPF19-206ENST00000541371 SERPINB2P05120 415 aa17.76■□□□□ 0.43
PRPF19-206ENST00000541371 CFAP53Q96M91 514 aa17.76■□□□□ 0.43
PRPF19-206ENST00000541371 ADAMTS7Q9UKP4 1686 aa17.76■□□□□ 0.43
PRPF19-206ENST00000541371 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
PRPF19-206ENST00000541371 ZNF790Q6PG37 636 aa17.75■□□□□ 0.43
PRPF19-206ENST00000541371 ZNF496Q96IT1 587 aaPredicted RBP17.75■□□□□ 0.43
PRPF19-206ENST00000541371 TEX13AQ9BXU3 409 aaPredicted RBP17.75■□□□□ 0.43
PRPF19-206ENST00000541371 BCL2L12Q9HB09 334 aa17.75■□□□□ 0.43
PRPF19-206ENST00000541371 NMRK2Q9NPI5 230 aa17.75■□□□□ 0.43
PRPF19-206ENST00000541371 VIRMAQ69YN4 1812 aaKnown RBP17.75■□□□□ 0.43
PRPF19-206ENST00000541371 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
PRPF19-206ENST00000541371 RNF181Q9P0P0 153 aa17.74■□□□□ 0.43
PRPF19-206ENST00000541371 ARFGEF1Q9Y6D6 1849 aa17.74■□□□□ 0.43
PRPF19-206ENST00000541371 BICDL1Q6ZP65 573 aa17.73■□□□□ 0.43
PRPF19-206ENST00000541371 ZNF330Q9Y3S2 320 aaPredicted RBP17.73■□□□□ 0.43
PRPF19-206ENST00000541371 HEG1Q9ULI3 1381 aa17.73■□□□□ 0.43
PRPF19-206ENST00000541371 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
PRPF19-206ENST00000541371 NPM2Q86SE8 214 aaKnown RBP17.72■□□□□ 0.43
PRPF19-206ENST00000541371 C16orf71Q8IYS4 520 aaPredicted RBP17.72■□□□□ 0.43
PRPF19-206ENST00000541371 FMNL2Q96PY5 1086 aa17.72■□□□□ 0.43
PRPF19-206ENST00000541371 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
PRPF19-206ENST00000541371 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
PRPF19-206ENST00000541371 APLP1P51693 650 aa17.71■□□□□ 0.43
PRPF19-206ENST00000541371 C2CD5Q86YS7 1000 aa17.71■□□□□ 0.43
PRPF19-206ENST00000541371 TTLL6Q8N841 843 aa17.71■□□□□ 0.43
PRPF19-206ENST00000541371 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
PRPF19-206ENST00000541371 UBR2Q8IWV8 1755 aa17.71■□□□□ 0.43
PRPF19-206ENST00000541371 BTBD11A6QL63 1104 aa17.7■□□□□ 0.42
PRPF19-206ENST00000541371 H0YIN7 160 aa17.7■□□□□ 0.42
PRPF19-206ENST00000541371 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
PRPF19-206ENST00000541371 TBC1D2BQ9UPU7 963 aa17.7■□□□□ 0.42
PRPF19-206ENST00000541371 IL6STP40189 918 aaPredicted RBP17.69■□□□□ 0.42
PRPF19-206ENST00000541371 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
PRPF19-206ENST00000541371 CEP350Q5VT06 3117 aa17.69■□□□□ 0.42
PRPF19-206ENST00000541371 CEMIPQ8WUJ3 1361 aa17.68■□□□□ 0.42
PRPF19-206ENST00000541371 AFDNP55196 1824 aaKnown RBP17.68■□□□□ 0.42
PRPF19-206ENST00000541371 A1BGP04217 495 aa17.68■□□□□ 0.42
PRPF19-206ENST00000541371 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
PRPF19-206ENST00000541371 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRPF19-206ENST00000541371 RBM46Q8TBY0 533 aaKnown RBP17.68■□□□□ 0.42
PRPF19-206ENST00000541371 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
PRPF19-206ENST00000541371 KCNQ3O43525 872 aa17.67■□□□□ 0.42
PRPF19-206ENST00000541371 RASSF7Q02833 373 aa17.67■□□□□ 0.42
PRPF19-206ENST00000541371 RRAGCQ9HB90 399 aa17.67■□□□□ 0.42
PRPF19-206ENST00000541371 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
PRPF19-206ENST00000541371 LMNB1P20700 586 aa17.66■□□□□ 0.42
PRPF19-206ENST00000541371 PPP2R1AP30153 589 aa17.66■□□□□ 0.42
PRPF19-206ENST00000541371 ZNF622Q969S3 477 aaKnown RBP eCLIP17.66■□□□□ 0.42
PRPF19-206ENST00000541371 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
PRPF19-206ENST00000541371 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
PRPF19-206ENST00000541371 NPHP1O15259 732 aa17.65■□□□□ 0.42
PRPF19-206ENST00000541371 PDE6BP35913 854 aa17.65■□□□□ 0.42
PRPF19-206ENST00000541371 SETDB2Q96T68 719 aa17.65■□□□□ 0.42
PRPF19-206ENST00000541371 BRIP1Q9BX63 1249 aa17.65■□□□□ 0.42
PRPF19-206ENST00000541371 ZC3H4Q9UPT8 1303 aaKnown RBP17.65■□□□□ 0.42
PRPF19-206ENST00000541371 FSTL1Q12841 308 aa17.64■□□□□ 0.41
PRPF19-206ENST00000541371 PRR5LQ6MZQ0 368 aa17.64■□□□□ 0.41
PRPF19-206ENST00000541371 CCDC24Q8N4L8 307 aa17.64■□□□□ 0.41
PRPF19-206ENST00000541371 USP16Q9Y5T5 823 aa17.64■□□□□ 0.41
PRPF19-206ENST00000541371 SIPA1L3O60292 1781 aaPredicted RBP17.63■□□□□ 0.41
PRPF19-206ENST00000541371 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
PRPF19-206ENST00000541371 MCM10Q7L590 875 aa17.63■□□□□ 0.41
PRPF19-206ENST00000541371 DZIP3Q86Y13 1208 aaKnown RBP17.63■□□□□ 0.41
PRPF19-206ENST00000541371 SBF1O95248 1867 aa17.63■□□□□ 0.41
PRPF19-206ENST00000541371 SNRPA1P09661 255 aaKnown RBP17.62■□□□□ 0.41
PRPF19-206ENST00000541371 CNBD1Q8NA66 436 aa17.62■□□□□ 0.41
PRPF19-206ENST00000541371 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
PRPF19-206ENST00000541371 GLTPD2A6NH11 291 aa17.61■□□□□ 0.41
PRPF19-206ENST00000541371 PIP4K2AP48426 406 aaPredicted RBP17.61■□□□□ 0.41
PRPF19-206ENST00000541371 ST5P78524 1137 aa17.61■□□□□ 0.41
PRPF19-206ENST00000541371 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
PRPF19-206ENST00000541371 PRAMEF22A3QJZ6 481 aa17.6■□□□□ 0.41
PRPF19-206ENST00000541371 NFKBIEO00221 500 aa17.6■□□□□ 0.41
PRPF19-206ENST00000541371 HTATSF1O43719 755 aaKnown RBP17.6■□□□□ 0.41
PRPF19-206ENST00000541371 C21orf2O43822 256 aa17.6■□□□□ 0.41
PRPF19-206ENST00000541371 PRELPP51888 382 aa17.6■□□□□ 0.41
PRPF19-206ENST00000541371 DCTN1Q14203 1278 aa17.6■□□□□ 0.41
PRPF19-206ENST00000541371 DNAJC5GQ8N7S2 189 aa17.6■□□□□ 0.41
PRPF19-206ENST00000541371 SMC1BQ8NDV3 1235 aa17.6■□□□□ 0.41
PRPF19-206ENST00000541371 SCN7AQ01118 1682 aa17.59■□□□□ 0.41
PRPF19-206ENST00000541371 NEFMP07197 916 aa17.59■□□□□ 0.41
PRPF19-206ENST00000541371 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
PRPF19-206ENST00000541371 CNKSR1Q969H4 720 aa17.59■□□□□ 0.41
PRPF19-206ENST00000541371 ZNF652Q9Y2D9 606 aa17.59■□□□□ 0.41
PRPF19-206ENST00000541371 DPY19L2Q6NUT2 758 aa17.58■□□□□ 0.4
PRPF19-206ENST00000541371 CLEC4GQ6UXB4 293 aa17.58■□□□□ 0.4
PRPF19-206ENST00000541371 NBPF5PQ86XG9 351 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms