RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
MRE11-210ENST00000541157 DISP2A7MBM2 1401 aa12.89□□□□□ -0.35
MRE11-210ENST00000541157 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
MRE11-210ENST00000541157 RNMTO43148 476 aaKnown RBP12.89□□□□□ -0.35
MRE11-210ENST00000541157 PHKG2P15735 406 aa12.89□□□□□ -0.35
MRE11-210ENST00000541157 HSPA1LP34931 641 aa12.89□□□□□ -0.35
MRE11-210ENST00000541157 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
MRE11-210ENST00000541157 MPRIPQ6WCQ1 1025 aa12.89□□□□□ -0.35
MRE11-210ENST00000541157 LGR6Q9HBX8 967 aa12.89□□□□□ -0.35
MRE11-210ENST00000541157 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.89□□□□□ -0.35
MRE11-210ENST00000541157 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
MRE11-210ENST00000541157 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 LRP6O75581 1613 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 CYP27B1O15528 508 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 PLIN1O60240 522 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 VAMP4O75379 141 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 IFNL2Q8IZJ0 200 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 MRC1P22897 1456 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 WNK3Q9BYP7 1800 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
MRE11-210ENST00000541157 SIPA1L3O60292 1781 aaPredicted RBP12.87□□□□□ -0.35
MRE11-210ENST00000541157 KDM3BQ7LBC6 1761 aa12.87□□□□□ -0.35
MRE11-210ENST00000541157 SCN11AQ9UI33 1791 aa12.87□□□□□ -0.35
MRE11-210ENST00000541157 TEFQ10587 303 aa12.87□□□□□ -0.35
MRE11-210ENST00000541157 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
MRE11-210ENST00000541157 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
MRE11-210ENST00000541157 TSPYL6Q8N831 410 aa12.87□□□□□ -0.35
MRE11-210ENST00000541157 ZCRB1Q8TBF4 217 aaKnown RBP12.87□□□□□ -0.35
MRE11-210ENST00000541157 SSH1Q8WYL5 1049 aa12.87□□□□□ -0.35
MRE11-210ENST00000541157 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
MRE11-210ENST00000541157 VIRMAQ69YN4 1812 aaKnown RBP12.86□□□□□ -0.35
MRE11-210ENST00000541157 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
MRE11-210ENST00000541157 DCAF5Q96JK2 942 aa12.86□□□□□ -0.35
MRE11-210ENST00000541157 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
MRE11-210ENST00000541157 SMC4Q9NTJ3 1288 aa12.86□□□□□ -0.35
MRE11-210ENST00000541157 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
MRE11-210ENST00000541157 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
MRE11-210ENST00000541157 SOS1Q07889 1333 aaPredicted RBP12.85□□□□□ -0.35
MRE11-210ENST00000541157 SPATA31A1Q5TZJ5 1347 aa12.85□□□□□ -0.35
MRE11-210ENST00000541157 SPATA31A5Q5VU36 1347 aa12.85□□□□□ -0.35
MRE11-210ENST00000541157 SPATA31A7Q8IWB4 1347 aa12.85□□□□□ -0.35
MRE11-210ENST00000541157 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
MRE11-210ENST00000541157 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
MRE11-210ENST00000541157 CANXP27824 592 aaKnown RBP12.84□□□□□ -0.35
MRE11-210ENST00000541157 PDE3AQ14432 1141 aa12.84□□□□□ -0.35
MRE11-210ENST00000541157 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
MRE11-210ENST00000541157 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
MRE11-210ENST00000541157 THRAP3Q9Y2W1 955 aaKnown RBP12.84□□□□□ -0.35
MRE11-210ENST00000541157 BCL9LQ86UU0 1499 aa12.84□□□□□ -0.35
MRE11-210ENST00000541157 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.83□□□□□ -0.36
MRE11-210ENST00000541157 UNC5CLQ8IV45 518 aa12.83□□□□□ -0.36
MRE11-210ENST00000541157 SLAIN1Q8ND83 568 aa12.83□□□□□ -0.36
MRE11-210ENST00000541157 FRAT1Q92837 279 aaPredicted RBP12.83□□□□□ -0.36
MRE11-210ENST00000541157 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
MRE11-210ENST00000541157 SLC52A2Q9HAB3 445 aa12.83□□□□□ -0.36
MRE11-210ENST00000541157 PPP4R2Q9NY27 417 aa12.83□□□□□ -0.36
MRE11-210ENST00000541157 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
MRE11-210ENST00000541157 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
MRE11-210ENST00000541157 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
MRE11-210ENST00000541157 FNBP4Q8N3X1 1017 aaPredicted RBP12.82□□□□□ -0.36
MRE11-210ENST00000541157 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
MRE11-210ENST00000541157 EXOC6Q8TAG9 804 aa12.82□□□□□ -0.36
MRE11-210ENST00000541157 NGLY1Q96IV0 654 aa12.82□□□□□ -0.36
MRE11-210ENST00000541157 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
MRE11-210ENST00000541157 CRBNQ96SW2 442 aa12.82□□□□□ -0.36
MRE11-210ENST00000541157 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
MRE11-210ENST00000541157 VPS72Q15906 364 aa12.81□□□□□ -0.36
MRE11-210ENST00000541157 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
MRE11-210ENST00000541157 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
MRE11-210ENST00000541157 IPO8O15397 1037 aaKnown RBP12.8□□□□□ -0.36
MRE11-210ENST00000541157 HOXB7P09629 217 aa12.8□□□□□ -0.36
MRE11-210ENST00000541157 MS4A1P11836 297 aa12.8□□□□□ -0.36
MRE11-210ENST00000541157 DDX54Q8TDD1 881 aaKnown RBP12.8□□□□□ -0.36
MRE11-210ENST00000541157 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
MRE11-210ENST00000541157 HEG1Q9ULI3 1381 aa12.8□□□□□ -0.36
MRE11-210ENST00000541157 TOGARAM1Q9Y4F4 1720 aa12.79□□□□□ -0.36
MRE11-210ENST00000541157 KCNQ3O43525 872 aa12.79□□□□□ -0.36
MRE11-210ENST00000541157 CABP4P57796 275 aa12.79□□□□□ -0.36
MRE11-210ENST00000541157 ATF7IPQ6VMQ6 1270 aa12.79□□□□□ -0.36
MRE11-210ENST00000541157 NFATC2IPQ8NCF5 419 aa12.79□□□□□ -0.36
MRE11-210ENST00000541157 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
MRE11-210ENST00000541157 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
MRE11-210ENST00000541157 PAPPAQ13219 1627 aa12.78□□□□□ -0.36
MRE11-210ENST00000541157 EXOC5O00471 708 aa12.78□□□□□ -0.36
MRE11-210ENST00000541157 TCERG1O14776 1098 aaKnown RBP12.78□□□□□ -0.36
MRE11-210ENST00000541157 TRIM27P14373 513 aa12.78□□□□□ -0.36
MRE11-210ENST00000541157 MEX3CQ5U5Q3 659 aaKnown RBP12.78□□□□□ -0.36
MRE11-210ENST00000541157 TNNQ9UQP3 1299 aa12.78□□□□□ -0.36
MRE11-210ENST00000541157 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
MRE11-210ENST00000541157 RLBP1P12271 317 aa12.77□□□□□ -0.37
MRE11-210ENST00000541157 CCDC30Q5VVM6 783 aa12.77□□□□□ -0.37
MRE11-210ENST00000541157 ZNF790Q6PG37 636 aa12.77□□□□□ -0.37
MRE11-210ENST00000541157 TMEM92Q6UXU6 159 aa12.77□□□□□ -0.37
MRE11-210ENST00000541157 DZIP1LQ8IYY4 767 aaKnown RBP12.77□□□□□ -0.37
MRE11-210ENST00000541157 CHMP4AQ9BY43 222 aa12.77□□□□□ -0.37
MRE11-210ENST00000541157 USP21Q9UK80 565 aa12.77□□□□□ -0.37
MRE11-210ENST00000541157 FTSJ3Q8IY81 847 aaKnown RBP12.76□□□□□ -0.37
MRE11-210ENST00000541157 CLUAP1Q96AJ1 413 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms