RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 CYP19A1P11511 503 aaPredicted RBP36.49■■■■□ 3.43
CHFR-218ENST00000540963 USPL1Q5W0Q7 1092 aa36.49■■■■□ 3.43
CHFR-218ENST00000540963 AFDNP55196 1824 aaKnown RBP36.49■■■■□ 3.43
CHFR-218ENST00000540963 NARFQ9UHQ1 456 aa36.48■■■■□ 3.43
CHFR-218ENST00000540963 DLEC1Q9Y238 1755 aa36.46■■■■□ 3.43
CHFR-218ENST00000540963 LGR6Q9HBX8 967 aa36.46■■■■□ 3.43
CHFR-218ENST00000540963 RNMTO43148 476 aaKnown RBP36.45■■■■□ 3.43
CHFR-218ENST00000540963 VSIG10Q8N0Z9 540 aa36.45■■■■□ 3.43
CHFR-218ENST00000540963 PCGF6Q9BYE7 350 aa36.45■■■■□ 3.43
CHFR-218ENST00000540963 COL15A1P39059 1388 aa36.44■■■■□ 3.42
CHFR-218ENST00000540963 AMER1Q5JTC6 1135 aaPredicted RBP36.44■■■■□ 3.42
CHFR-218ENST00000540963 NFIXQ14938 502 aa36.43■■■■□ 3.42
CHFR-218ENST00000540963 KLRG1Q96E93 195 aa36.43■■■■□ 3.42
CHFR-218ENST00000540963 RRAGCQ9HB90 399 aa36.42■■■■□ 3.42
CHFR-218ENST00000540963 JMYQ8N9B5 988 aa36.41■■■■□ 3.42
CHFR-218ENST00000540963 UBR2Q8IWV8 1755 aa36.4■■■■□ 3.42
CHFR-218ENST00000540963 SLC39A6Q13433 755 aa36.39■■■■□ 3.42
CHFR-218ENST00000540963 ZBTB1Q9Y2K1 713 aa36.38■■■■□ 3.41
CHFR-218ENST00000540963 LMNB1P20700 586 aa36.37■■■■□ 3.41
CHFR-218ENST00000540963 SMC1BQ8NDV3 1235 aa36.37■■■■□ 3.41
CHFR-218ENST00000540963 SERPINB2P05120 415 aa36.36■■■■□ 3.41
CHFR-218ENST00000540963 BCL2L12Q9HB09 334 aa36.36■■■■□ 3.41
CHFR-218ENST00000540963 TTLL6Q8N841 843 aa36.35■■■■□ 3.41
CHFR-218ENST00000540963 HMOX1P09601 288 aa36.34■■■■□ 3.41
CHFR-218ENST00000540963 MTHFSDQ2M296 383 aaKnown RBP36.34■■■■□ 3.41
CHFR-218ENST00000540963 GLTPD2A6NH11 291 aa36.32■■■■□ 3.4
CHFR-218ENST00000540963 RASSF7Q02833 373 aa36.32■■■■□ 3.4
CHFR-218ENST00000540963 CCDC88AQ3V6T2 1871 aa36.31■■■■□ 3.4
CHFR-218ENST00000540963 STARD3NLO95772 234 aa36.31■■■■□ 3.4
CHFR-218ENST00000540963 DIAPH1O60610 1272 aaKnown RBP36.3■■■■□ 3.4
CHFR-218ENST00000540963 VEGFAP15692 232 aaPredicted RBP36.3■■■■□ 3.4
CHFR-218ENST00000540963 HTRA3P83110 453 aa36.3■■■■□ 3.4
CHFR-218ENST00000540963 PDZRN3Q9UPQ7 1066 aa36.3■■■■□ 3.4
CHFR-218ENST00000540963 A0A087WZG4 1122 aa36.29■■■■□ 3.4
CHFR-218ENST00000540963 H0YIN7 160 aa36.29■■■■□ 3.4
CHFR-218ENST00000540963 EIF5P55010 431 aaKnown RBP36.28■■■■□ 3.4
CHFR-218ENST00000540963 C2CD5Q86YS7 1000 aa36.28■■■■□ 3.4
CHFR-218ENST00000540963 TIAM2Q8IVF5 1701 aa36.28■■■■□ 3.4
CHFR-218ENST00000540963 TTC5Q8N0Z6 440 aa36.27■■■■□ 3.4
CHFR-218ENST00000540963 CANXP27824 592 aaKnown RBP36.26■■■■□ 3.4
CHFR-218ENST00000540963 TEX13AQ9BXU3 409 aaPredicted RBP36.25■■■■□ 3.39
CHFR-218ENST00000540963 PRELPP51888 382 aa36.24■■■■□ 3.39
CHFR-218ENST00000540963 KIF7Q2M1P5 1343 aa36.24■■■■□ 3.39
CHFR-218ENST00000540963 PER1O15534 1290 aaPredicted RBP36.23■■■■□ 3.39
CHFR-218ENST00000540963 CARMIL3Q8ND23 1372 aa36.23■■■■□ 3.39
CHFR-218ENST00000540963 SCN7AQ01118 1682 aa36.22■■■■□ 3.39
CHFR-218ENST00000540963 ANKRD31Q8N7Z5 1873 aa36.22■■■■□ 3.39
CHFR-218ENST00000540963 NFKBIEO00221 500 aa36.21■■■■□ 3.39
CHFR-218ENST00000540963 DICER1Q9UPY3 1922 aaKnown RBP36.21■■■■□ 3.39
CHFR-218ENST00000540963 SIPA1L3O60292 1781 aaPredicted RBP36.2■■■■□ 3.39
CHFR-218ENST00000540963 BRIP1Q9BX63 1249 aa36.2■■■■□ 3.39
CHFR-218ENST00000540963 HEG1Q9ULI3 1381 aa36.19■■■■□ 3.38
CHFR-218ENST00000540963 PDE6BP35913 854 aa36.19■■■■□ 3.38
CHFR-218ENST00000540963 TEFQ10587 303 aa36.18■■■■□ 3.38
CHFR-218ENST00000540963 ZNF790Q6PG37 636 aa36.18■■■■□ 3.38
CHFR-218ENST00000540963 BICDL1Q6ZP65 573 aa36.18■■■■□ 3.38
CHFR-218ENST00000540963 GAS2L2Q8NHY3 880 aa36.18■■■■□ 3.38
CHFR-218ENST00000540963 PCNTO95613 3336 aa36.18■■■■□ 3.38
CHFR-218ENST00000540963 FER1L6Q2WGJ9 1857 aa36.18■■■■□ 3.38
CHFR-218ENST00000540963 IL6STP40189 918 aaPredicted RBP36.17■■■■□ 3.38
CHFR-218ENST00000540963 DPY19L2Q6NUT2 758 aa36.17■■■■□ 3.38
CHFR-218ENST00000540963 ZNF496Q96IT1 587 aaPredicted RBP36.17■■■■□ 3.38
CHFR-218ENST00000540963 GNAT3A8MTJ3 354 aa36.16■■■■□ 3.38
CHFR-218ENST00000540963 COL13A1Q5TAT6 717 aaPredicted RBP36.16■■■■□ 3.38
CHFR-218ENST00000540963 TBC1D9BQ66K14 1250 aa36.16■■■■□ 3.38
CHFR-218ENST00000540963 NPC1L1Q9UHC9 1359 aa36.15■■■■□ 3.38
CHFR-218ENST00000540963 COL3A1P02461 1466 aaPredicted RBP36.15■■■■□ 3.38
CHFR-218ENST00000540963 IL17REQ8NFR9 667 aa36.14■■■■□ 3.38
CHFR-218ENST00000540963 CC2D1BQ5T0F9 858 aaKnown RBP36.13■■■■□ 3.37
CHFR-218ENST00000540963 LTBP3Q9NS15 1303 aa36.12■■■■□ 3.37
CHFR-218ENST00000540963 COL11A2P13942 1736 aaPredicted RBP36.12■■■■□ 3.37
CHFR-218ENST00000540963 PRR5LQ6MZQ0 368 aa36.12■■■■□ 3.37
CHFR-218ENST00000540963 CCER1Q8TC90 406 aaPredicted RBP36.12■■■■□ 3.37
CHFR-218ENST00000540963 ZNF622Q969S3 477 aaKnown RBP eCLIP36.12■■■■□ 3.378e-10■■□□□ 12.1
CHFR-218ENST00000540963 POTECB2RU33 542 aa36.1■■■■□ 3.37
CHFR-218ENST00000540963 FMNL2Q96PY5 1086 aa36.1■■■■□ 3.37
CHFR-218ENST00000540963 NPM2Q86SE8 214 aaKnown RBP36.09■■■■□ 3.37
CHFR-218ENST00000540963 TBC1D2BQ9UPU7 963 aa36.09■■■■□ 3.37
CHFR-218ENST00000540963 CEMIPQ8WUJ3 1361 aa36.08■■■■□ 3.37
CHFR-218ENST00000540963 C21orf2O43822 256 aa36.08■■■■□ 3.37
CHFR-218ENST00000540963 ERFEQ4G0M1 354 aa36.08■■■■□ 3.37
CHFR-218ENST00000540963 SETDB2Q96T68 719 aa36.07■■■■□ 3.36
CHFR-218ENST00000540963 ARFGEF2Q9Y6D5 1785 aa36.07■■■■□ 3.36
CHFR-218ENST00000540963 U2SURPO15042 1029 aaKnown RBP36.06■■■■□ 3.36
CHFR-218ENST00000540963 CNKSR1Q969H4 720 aa36.06■■■■□ 3.36
CHFR-218ENST00000540963 BCORQ6W2J9 1755 aa36.05■■■■□ 3.36
CHFR-218ENST00000540963 SOGA3Q5TF21 947 aa36.05■■■■□ 3.36
CHFR-218ENST00000540963 STYK1Q6J9G0 422 aa36.05■■■■□ 3.36
CHFR-218ENST00000540963 CNBD1Q8NA66 436 aa36.05■■■■□ 3.36
CHFR-218ENST00000540963 ZNF330Q9Y3S2 320 aaPredicted RBP36.05■■■■□ 3.36
CHFR-218ENST00000540963 CAMTA2O94983 1202 aa36.04■■■■□ 3.36
CHFR-218ENST00000540963 TAOK3Q9H2K8 898 aa36.04■■■■□ 3.36
CHFR-218ENST00000540963 SLX4Q8IY92 1834 aa36.02■■■■□ 3.36
CHFR-218ENST00000540963 ST5P78524 1137 aa36.02■■■■□ 3.36
CHFR-218ENST00000540963 TNS4Q8IZW8 715 aa36.02■■■■□ 3.36
CHFR-218ENST00000540963 A1BGP04217 495 aa36.01■■■■□ 3.36
CHFR-218ENST00000540963 SRGNP10124 158 aa36.01■■■■□ 3.36
CHFR-218ENST00000540963 NPHP1O15259 732 aa36■■■■□ 3.35
CHFR-218ENST00000540963 CACNA1SQ13698 1873 aa36■■■■□ 3.35
CHFR-218ENST00000540963 CLEC4GQ6UXB4 293 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms