RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 SBNO2Q9Y2G9 1366 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 DLC1Q96QB1 1528 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 U2SURPO15042 1029 aaKnown RBP11.65□□□□□ -0.54
CLDN2-202ENST00000540876 GUCY2CP25092 1073 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 CWC22Q9HCG8 908 aaKnown RBP11.65□□□□□ -0.54
CLDN2-202ENST00000540876 POLKQ9UBT6 870 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 CHD2O14647 1828 aaKnown RBP11.65□□□□□ -0.55
CLDN2-202ENST00000540876 TBC1D9Q6ZT07 1266 aa11.64□□□□□ -0.55
CLDN2-202ENST00000540876 MORC1Q86VD1 984 aa11.64□□□□□ -0.55
CLDN2-202ENST00000540876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLDN2-202ENST00000540876 IFT57Q9NWB7 429 aa11.64□□□□□ -0.55
CLDN2-202ENST00000540876 ZNF446Q9NWS9 450 aa11.64□□□□□ -0.55
CLDN2-202ENST00000540876 LCMT1Q9UIC8 334 aa11.64□□□□□ -0.55
CLDN2-202ENST00000540876 NPHP1O15259 732 aa11.64□□□□□ -0.55
CLDN2-202ENST00000540876 CCDC172P0C7W6 258 aa11.64□□□□□ -0.55
CLDN2-202ENST00000540876 FBXO38Q6PIJ6 1188 aa11.64□□□□□ -0.55
CLDN2-202ENST00000540876 C19orf44Q9H6X5 657 aa11.64□□□□□ -0.55
CLDN2-202ENST00000540876 XRN1Q8IZH2 1706 aaKnown RBP11.64□□□□□ -0.55
CLDN2-202ENST00000540876 KDM4AO75164 1064 aa11.63□□□□□ -0.55
CLDN2-202ENST00000540876 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
CLDN2-202ENST00000540876 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
CLDN2-202ENST00000540876 RABEP1Q15276 862 aa11.63□□□□□ -0.55
CLDN2-202ENST00000540876 HOMEZQ8IX15 550 aa11.63□□□□□ -0.55
CLDN2-202ENST00000540876 NFATC2IPQ8NCF5 419 aa11.63□□□□□ -0.55
CLDN2-202ENST00000540876 POLR3GO15318 223 aaPredicted RBP11.63□□□□□ -0.55
CLDN2-202ENST00000540876 ATF3P18847 181 aa11.63□□□□□ -0.55
CLDN2-202ENST00000540876 HDAC1Q13547 482 aaPredicted RBP11.63□□□□□ -0.55
CLDN2-202ENST00000540876 CCDC191Q8NCU4 936 aa11.63□□□□□ -0.55
CLDN2-202ENST00000540876 FAM53CQ9NYF3 392 aa11.63□□□□□ -0.55
CLDN2-202ENST00000540876 FOXO3O43524 673 aa11.62□□□□□ -0.55
CLDN2-202ENST00000540876 TPM3P06753 285 aa11.62□□□□□ -0.55
CLDN2-202ENST00000540876 ITPRIPQ8IWB1 547 aa11.62□□□□□ -0.55
CLDN2-202ENST00000540876 DZIP1LQ8IYY4 767 aaKnown RBP11.62□□□□□ -0.55
CLDN2-202ENST00000540876 GDPD2Q9HCC8 539 aa11.62□□□□□ -0.55
CLDN2-202ENST00000540876 BRMS1Q9HCU9 246 aa11.62□□□□□ -0.55
CLDN2-202ENST00000540876 JRKLQ9Y4A0 524 aa11.62□□□□□ -0.55
CLDN2-202ENST00000540876 PTGS1P23219 599 aa11.62□□□□□ -0.55
CLDN2-202ENST00000540876 KIF1BPQ96EK5 621 aa11.62□□□□□ -0.55
CLDN2-202ENST00000540876 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
CLDN2-202ENST00000540876 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
CLDN2-202ENST00000540876 FBLN1P23142 703 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 ELF2Q15723 593 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 BMP2KLQ5H9B9 411 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 TEX35Q5T0J7 233 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 GOLGA6L1Q8N7Z2 621 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 ZNF215Q9UL58 517 aaPredicted RBP11.61□□□□□ -0.55
CLDN2-202ENST00000540876 PAXBP1Q9Y5B6 917 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 PPIP5K1Q6PFW1 1433 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 GADD45BO75293 160 aaPredicted RBP11.61□□□□□ -0.55
CLDN2-202ENST00000540876 NUTM2GQ5VZR2 741 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 TXLNBQ8N3L3 684 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 NGDNQ8NEJ9 315 aaKnown RBP11.61□□□□□ -0.55
CLDN2-202ENST00000540876 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 LRRFIP2Q9Y608 721 aaKnown RBP11.61□□□□□ -0.55
CLDN2-202ENST00000540876 LRRC7Q96NW7 1537 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 ACEP12821 1306 aa11.61□□□□□ -0.55
CLDN2-202ENST00000540876 BMS1Q14692 1282 aaKnown RBP11.6□□□□□ -0.55
CLDN2-202ENST00000540876 ZKSCAN2Q63HK3 967 aa11.6□□□□□ -0.55
CLDN2-202ENST00000540876 A0A1W2PP64 1363 aa11.6□□□□□ -0.55
CLDN2-202ENST00000540876 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
CLDN2-202ENST00000540876 TPD52L1Q16890 204 aaPredicted RBP11.6□□□□□ -0.55
CLDN2-202ENST00000540876 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
CLDN2-202ENST00000540876 NUCB1Q02818 461 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 CHD1LQ86WJ1 897 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 EGFL6Q8IUX8 553 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 GGNBP2Q9H3C7 697 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 KNDC1Q76NI1 1749 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 AP5Z1O43299 807 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 SMARCA5O60264 1052 aaPredicted RBP11.59□□□□□ -0.55
CLDN2-202ENST00000540876 MUM1L1Q5H9M0 696 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 NSD3Q9BZ95 1437 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 LRMPQ12912 555 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 E2F4Q16254 413 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 ZSCAN26Q16670 478 aa11.59□□□□□ -0.55
CLDN2-202ENST00000540876 ATAD2Q6PL18 1390 aa11.58□□□□□ -0.55
CLDN2-202ENST00000540876 ATP7BP35670 1465 aa11.58□□□□□ -0.56
CLDN2-202ENST00000540876 NALCNQ8IZF0 1738 aa11.58□□□□□ -0.56
CLDN2-202ENST00000540876 DNAJC21Q5F1R6 531 aaKnown RBP11.58□□□□□ -0.56
CLDN2-202ENST00000540876 DEF6Q9H4E7 631 aa11.58□□□□□ -0.56
CLDN2-202ENST00000540876 MSH6P52701 1360 aa11.58□□□□□ -0.56
CLDN2-202ENST00000540876 PIP4K2BP78356 416 aa11.58□□□□□ -0.56
CLDN2-202ENST00000540876 ANKRD45Q5TZF3 282 aa11.58□□□□□ -0.56
CLDN2-202ENST00000540876 DRC7Q8IY82 874 aa11.58□□□□□ -0.56
CLDN2-202ENST00000540876 A0A1B0GUL7 405 aa11.57□□□□□ -0.56
CLDN2-202ENST00000540876 ST18O60284 1047 aa11.57□□□□□ -0.56
CLDN2-202ENST00000540876 TTC31Q49AM3 519 aaPredicted RBP11.57□□□□□ -0.56
CLDN2-202ENST00000540876 CEP135Q66GS9 1140 aa11.57□□□□□ -0.56
CLDN2-202ENST00000540876 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
CLDN2-202ENST00000540876 NME9Q86XW9 330 aa11.57□□□□□ -0.56
CLDN2-202ENST00000540876 TERF2IPQ9NYB0 399 aa11.57□□□□□ -0.56
CLDN2-202ENST00000540876 CWC15Q9P013 229 aaKnown RBP11.57□□□□□ -0.56
CLDN2-202ENST00000540876 SLAIN2Q9P270 581 aa11.57□□□□□ -0.56
CLDN2-202ENST00000540876 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
CLDN2-202ENST00000540876 NWD1Q149M9 1564 aa11.57□□□□□ -0.56
CLDN2-202ENST00000540876 HDGFL2Q7Z4V5 671 aaPredicted RBP11.57□□□□□ -0.56
CLDN2-202ENST00000540876 HTATSF1O43719 755 aaKnown RBP11.56□□□□□ -0.56
CLDN2-202ENST00000540876 ST5P78524 1137 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 SATB1Q01826 763 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 CCDC186Q7Z3E2 898 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms