RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 POLRMTO00411 1230 aaKnown RBP19.41■□□□□ 0.7
MSRB3-209ENST00000540804 KCNA3P22001 575 aa19.41■□□□□ 0.7
MSRB3-209ENST00000540804 VSIG10Q8N0Z9 540 aa19.41■□□□□ 0.7
MSRB3-209ENST00000540804 BCL2L12Q9HB09 334 aa19.41■□□□□ 0.7
MSRB3-209ENST00000540804 COL15A1P39059 1388 aa19.41■□□□□ 0.7
MSRB3-209ENST00000540804 VIRMAQ69YN4 1812 aaKnown RBP19.4■□□□□ 0.7
MSRB3-209ENST00000540804 KIF13BQ9NQT8 1826 aa19.4■□□□□ 0.7
MSRB3-209ENST00000540804 ZPR1O75312 459 aa19.4■□□□□ 0.7
MSRB3-209ENST00000540804 ZNF790Q6PG37 636 aa19.4■□□□□ 0.7
MSRB3-209ENST00000540804 ADCY9O60503 1353 aa19.4■□□□□ 0.7
MSRB3-209ENST00000540804 CHRNA5P30532 468 aa19.39■□□□□ 0.69
MSRB3-209ENST00000540804 NARFQ9UHQ1 456 aa19.39■□□□□ 0.69
MSRB3-209ENST00000540804 NUDCQ9Y266 331 aa19.39■□□□□ 0.69
MSRB3-209ENST00000540804 SENP3-EIF4A1A0A087X0R7 540 aa19.38■□□□□ 0.69
MSRB3-209ENST00000540804 FCHSD2O94868 740 aa19.38■□□□□ 0.69
MSRB3-209ENST00000540804 DCTN1Q14203 1278 aa19.38■□□□□ 0.69
MSRB3-209ENST00000540804 NFIXQ14938 502 aa19.38■□□□□ 0.69
MSRB3-209ENST00000540804 MCM10Q7L590 875 aa19.38■□□□□ 0.69
MSRB3-209ENST00000540804 CEMIPQ8WUJ3 1361 aa19.38■□□□□ 0.69
MSRB3-209ENST00000540804 HEG1Q9ULI3 1381 aa19.38■□□□□ 0.69
MSRB3-209ENST00000540804 UBR2Q8IWV8 1755 aa19.37■□□□□ 0.69
MSRB3-209ENST00000540804 ARHGAP27Q6ZUM4 889 aa19.37■□□□□ 0.69
MSRB3-209ENST00000540804 PRAMEF22A3QJZ6 481 aa19.36■□□□□ 0.69
MSRB3-209ENST00000540804 BTBD11A6QL63 1104 aa19.36■□□□□ 0.69
MSRB3-209ENST00000540804 ZNF330Q9Y3S2 320 aaPredicted RBP19.36■□□□□ 0.69
MSRB3-209ENST00000540804 STARD3NLO95772 234 aa19.35■□□□□ 0.69
MSRB3-209ENST00000540804 A1BGP04217 495 aa19.35■□□□□ 0.69
MSRB3-209ENST00000540804 EIF5P55010 431 aaKnown RBP19.35■□□□□ 0.69
MSRB3-209ENST00000540804 BICDL1Q6ZP65 573 aa19.35■□□□□ 0.69
MSRB3-209ENST00000540804 GPBP1L1Q9HC44 474 aaPredicted RBP19.35■□□□□ 0.69
MSRB3-209ENST00000540804 PIP4K2AP48426 406 aaPredicted RBP19.34■□□□□ 0.69
MSRB3-209ENST00000540804 FMNL2Q96PY5 1086 aa19.34■□□□□ 0.69
MSRB3-209ENST00000540804 SIPA1L3O60292 1781 aaPredicted RBP19.34■□□□□ 0.69
MSRB3-209ENST00000540804 SERPINB2P05120 415 aa19.33■□□□□ 0.68
MSRB3-209ENST00000540804 PIM2Q9P1W9 311 aa19.33■□□□□ 0.68
MSRB3-209ENST00000540804 TBC1D2BQ9UPU7 963 aa19.33■□□□□ 0.68
MSRB3-209ENST00000540804 USP16Q9Y5T5 823 aa19.33■□□□□ 0.68
MSRB3-209ENST00000540804 CARMIL3Q8ND23 1372 aa19.32■□□□□ 0.68
MSRB3-209ENST00000540804 DALRD3Q5D0E6 543 aaKnown RBP19.31■□□□□ 0.68
MSRB3-209ENST00000540804 TBC1D9BQ66K14 1250 aa19.31■□□□□ 0.68
MSRB3-209ENST00000540804 CCDC24Q8N4L8 307 aa19.31■□□□□ 0.68
MSRB3-209ENST00000540804 RTF1Q92541 710 aaKnown RBP19.31■□□□□ 0.68
MSRB3-209ENST00000540804 TEX13AQ9BXU3 409 aaPredicted RBP19.3■□□□□ 0.68
MSRB3-209ENST00000540804 MIS18AQ9NYP9 233 aa19.3■□□□□ 0.68
MSRB3-209ENST00000540804 IL6STP40189 918 aaPredicted RBP19.28■□□□□ 0.68
MSRB3-209ENST00000540804 BRCA1P38398 1863 aaKnown RBP19.27■□□□□ 0.68
MSRB3-209ENST00000540804 A0A087WZG4 1122 aa19.27■□□□□ 0.68
MSRB3-209ENST00000540804 C9orf131Q5VYM1 1079 aa19.27■□□□□ 0.68
MSRB3-209ENST00000540804 KIF3CO14782 793 aa19.26■□□□□ 0.67
MSRB3-209ENST00000540804 CAMTA2O94983 1202 aa19.26■□□□□ 0.67
MSRB3-209ENST00000540804 PLEKHF1Q96S99 279 aa19.26■□□□□ 0.67
MSRB3-209ENST00000540804 THUMPD2Q9BTF0 503 aaKnown RBP19.26■□□□□ 0.67
MSRB3-209ENST00000540804 NRXN2Q9P2S2 1712 aa19.25■□□□□ 0.67
MSRB3-209ENST00000540804 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
MSRB3-209ENST00000540804 C2CD5Q86YS7 1000 aa19.25■□□□□ 0.67
MSRB3-209ENST00000540804 RASSF7Q02833 373 aa19.24■□□□□ 0.67
MSRB3-209ENST00000540804 DZIP3Q86Y13 1208 aaKnown RBP19.24■□□□□ 0.67
MSRB3-209ENST00000540804 NBPF26B4DH59 902 aa19.23■□□□□ 0.67
MSRB3-209ENST00000540804 HTATSF1O43719 755 aaKnown RBP19.23■□□□□ 0.67
MSRB3-209ENST00000540804 SNRPA1P09661 255 aaKnown RBP19.23■□□□□ 0.67
MSRB3-209ENST00000540804 DDX10Q13206 875 aaKnown RBP19.23■□□□□ 0.67
MSRB3-209ENST00000540804 TAF7Q15545 349 aaPredicted RBP19.23■□□□□ 0.67
MSRB3-209ENST00000540804 PRR5LQ6MZQ0 368 aa19.23■□□□□ 0.67
MSRB3-209ENST00000540804 NBPF10Q6P3W6 841 aaKnown RBP19.23■□□□□ 0.67
MSRB3-209ENST00000540804 NBPF15Q8N660 670 aa19.23■□□□□ 0.67
MSRB3-209ENST00000540804 NMRK2Q9NPI5 230 aa19.23■□□□□ 0.67
MSRB3-209ENST00000540804 SCN7AQ01118 1682 aa19.22■□□□□ 0.67
MSRB3-209ENST00000540804 PRELPP51888 382 aa19.22■□□□□ 0.67
MSRB3-209ENST00000540804 RNF181Q9P0P0 153 aa19.22■□□□□ 0.67
MSRB3-209ENST00000540804 ZNF219Q9P2Y4 722 aaPredicted RBP19.21■□□□□ 0.67
MSRB3-209ENST00000540804 H0YIN7 160 aa19.2■□□□□ 0.66
MSRB3-209ENST00000540804 NFE2L2Q16236 605 aa19.2■□□□□ 0.66
MSRB3-209ENST00000540804 NPM2Q86SE8 214 aaKnown RBP19.2■□□□□ 0.66
MSRB3-209ENST00000540804 ARFGEF1Q9Y6D6 1849 aa19.2■□□□□ 0.66
MSRB3-209ENST00000540804 NEFMP07197 916 aa19.19■□□□□ 0.66
MSRB3-209ENST00000540804 TTLL6Q8N841 843 aa19.19■□□□□ 0.66
MSRB3-209ENST00000540804 ZNF622Q969S3 477 aaKnown RBP eCLIP19.19■□□□□ 0.66
MSRB3-209ENST00000540804 SETDB2Q96T68 719 aa19.19■□□□□ 0.66
MSRB3-209ENST00000540804 NGEFQ8N5V2 710 aa19.17■□□□□ 0.66
MSRB3-209ENST00000540804 BRIP1Q9BX63 1249 aa19.17■□□□□ 0.66
MSRB3-209ENST00000540804 FAM177BA6PVY3 158 aa19.16■□□□□ 0.66
MSRB3-209ENST00000540804 NFKBIEO00221 500 aa19.16■□□□□ 0.66
MSRB3-209ENST00000540804 HLFQ16534 295 aa19.16■□□□□ 0.66
MSRB3-209ENST00000540804 CNBD1Q8NA66 436 aa19.16■□□□□ 0.66
MSRB3-209ENST00000540804 MAPK8IP3Q9UPT6 1336 aa19.16■□□□□ 0.66
MSRB3-209ENST00000540804 ANKRD31Q8N7Z5 1873 aa19.16■□□□□ 0.66
MSRB3-209ENST00000540804 NPHP1O15259 732 aa19.15■□□□□ 0.66
MSRB3-209ENST00000540804 C21orf2O43822 256 aa19.15■□□□□ 0.66
MSRB3-209ENST00000540804 HSPA6P17066 643 aa19.15■□□□□ 0.66
MSRB3-209ENST00000540804 PDE6BP35913 854 aa19.15■□□□□ 0.66
MSRB3-209ENST00000540804 EIF4A1P60842 406 aaKnown RBP19.15■□□□□ 0.66
MSRB3-209ENST00000540804 RALBP1Q15311 655 aa19.15■□□□□ 0.66
MSRB3-209ENST00000540804 BCORQ6W2J9 1755 aa19.14■□□□□ 0.66
MSRB3-209ENST00000540804 COL11A2P13942 1736 aaPredicted RBP19.14■□□□□ 0.65
MSRB3-209ENST00000540804 DLEC1Q9Y238 1755 aa19.14■□□□□ 0.65
MSRB3-209ENST00000540804 CEP350Q5VT06 3117 aa19.14■□□□□ 0.65
MSRB3-209ENST00000540804 NBPF5PQ86XG9 351 aaPredicted RBP19.13■□□□□ 0.65
MSRB3-209ENST00000540804 CCDC146Q8IYE0 955 aa19.13■□□□□ 0.65
MSRB3-209ENST00000540804 PNISRQ8TF01 805 aaKnown RBP19.13■□□□□ 0.65
MSRB3-209ENST00000540804 RRAGCQ9HB90 399 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms