RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PXDNLA1KZ92 1463 aa14.91□□□□□ -0.02
NPC1-202ENST00000540608 MCM5P33992 734 aa14.9□□□□□ -0.02
NPC1-202ENST00000540608 SSH3Q8TE77 659 aa14.9□□□□□ -0.02
NPC1-202ENST00000540608 RAB11FIP3O75154 756 aa14.9□□□□□ -0.02
NPC1-202ENST00000540608 LTV1Q96GA3 475 aaPredicted RBP14.9□□□□□ -0.02
NPC1-202ENST00000540608 ANKARQ7Z5J8 1434 aa14.9□□□□□ -0.02
NPC1-202ENST00000540608 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
NPC1-202ENST00000540608 HSPA4P34932 840 aa14.9□□□□□ -0.02
NPC1-202ENST00000540608 TAF7Q15545 349 aaPredicted RBP14.9□□□□□ -0.02
NPC1-202ENST00000540608 ABTB2Q8N961 1025 aa14.9□□□□□ -0.02
NPC1-202ENST00000540608 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
NPC1-202ENST00000540608 SYAP1Q96A49 352 aaPredicted RBP14.9□□□□□ -0.02
NPC1-202ENST00000540608 N4BP2Q86UW6 1770 aaPredicted RBP14.89□□□□□ -0.03
NPC1-202ENST00000540608 ZKSCAN5Q9Y2L8 839 aa14.89□□□□□ -0.03
NPC1-202ENST00000540608 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
NPC1-202ENST00000540608 NOL8Q76FK4 1167 aaKnown RBP14.89□□□□□ -0.03
NPC1-202ENST00000540608 UPF3BQ9BZI7 483 aaKnown RBP14.89□□□□□ -0.03
NPC1-202ENST00000540608 CCDC39Q9UFE4 941 aa14.89□□□□□ -0.03
NPC1-202ENST00000540608 WDR33Q9C0J8 1336 aaKnown RBP14.88□□□□□ -0.03
NPC1-202ENST00000540608 MAP3K5Q99683 1374 aa14.88□□□□□ -0.03
NPC1-202ENST00000540608 TSPY26PQ9H489 355 aa14.88□□□□□ -0.03
NPC1-202ENST00000540608 POLA2Q14181 598 aa14.87□□□□□ -0.03
NPC1-202ENST00000540608 USHBP1Q8N6Y0 703 aa14.87□□□□□ -0.03
NPC1-202ENST00000540608 IL1RAPL2Q9NP60 686 aa14.87□□□□□ -0.03
NPC1-202ENST00000540608 NUTM1Q86Y26 1132 aa14.87□□□□□ -0.03
NPC1-202ENST00000540608 IL25Q9H293 177 aa14.87□□□□□ -0.03
NPC1-202ENST00000540608 ZNF142P52746 1687 aaPredicted RBP14.86□□□□□ -0.03
NPC1-202ENST00000540608 SURF6O75683 361 aaKnown RBP14.86□□□□□ -0.03
NPC1-202ENST00000540608 PHF14O94880 888 aa14.86□□□□□ -0.03
NPC1-202ENST00000540608 PPP1R42Q7Z4L9 355 aa14.86□□□□□ -0.03
NPC1-202ENST00000540608 USP48Q86UV5 1035 aa14.86□□□□□ -0.03
NPC1-202ENST00000540608 CSPP1Q1MSJ5 1256 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 C14orf37Q86TY3 774 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 RNF214Q8ND24 703 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 PI4K2BQ8TCG2 481 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 USP54Q70EL1 1684 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 SGSM2O43147 1006 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 HDGFL1Q5TGJ6 251 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 RHPN1Q8TCX5 695 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 PDCL3Q9H2J4 239 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 GADD45BO75293 160 aaPredicted RBP14.85□□□□□ -0.03
NPC1-202ENST00000540608 XPCQ01831 940 aaPredicted RBP14.85□□□□□ -0.03
NPC1-202ENST00000540608 TMEM87AQ8NBN3 555 aa14.85□□□□□ -0.03
NPC1-202ENST00000540608 PHAXQ9H814 394 aaKnown RBP14.85□□□□□ -0.03
NPC1-202ENST00000540608 RAD50Q92878 1312 aa14.84□□□□□ -0.03
NPC1-202ENST00000540608 KIF1BPQ96EK5 621 aa14.84□□□□□ -0.03
NPC1-202ENST00000540608 RBM33Q96EV2 1170 aaKnown RBP14.84□□□□□ -0.03
NPC1-202ENST00000540608 R3HCC1Q9Y3T6 440 aaKnown RBP14.84□□□□□ -0.03
NPC1-202ENST00000540608 TTC14Q96N46 770 aa14.83□□□□□ -0.04
NPC1-202ENST00000540608 SNX14Q9Y5W7 946 aa14.83□□□□□ -0.04
NPC1-202ENST00000540608 MAP4K4O95819 1239 aaPredicted RBP14.83□□□□□ -0.04
NPC1-202ENST00000540608 CNTROBQ8N137 903 aa14.83□□□□□ -0.04
NPC1-202ENST00000540608 LSG1Q9H089 658 aaKnown RBP14.83□□□□□ -0.04
NPC1-202ENST00000540608 GDPD2Q9HCC8 539 aa14.83□□□□□ -0.04
NPC1-202ENST00000540608 RPAP1Q9BWH6 1393 aaPredicted RBP14.83□□□□□ -0.04
NPC1-202ENST00000540608 SRGAP3O43295 1099 aa14.82□□□□□ -0.04
NPC1-202ENST00000540608 FOXD4L6Q3SYB3 417 aaPredicted RBP14.82□□□□□ -0.04
NPC1-202ENST00000540608 FOXD4L3Q6VB84 417 aaPredicted RBP14.82□□□□□ -0.04
NPC1-202ENST00000540608 PHF8Q9UPP1 1060 aa14.82□□□□□ -0.04
NPC1-202ENST00000540608 UVSSAQ2YD98 709 aa14.82□□□□□ -0.04
NPC1-202ENST00000540608 FAM184AQ8NB25 1140 aa14.82□□□□□ -0.04
NPC1-202ENST00000540608 LTN1O94822 1766 aa14.82□□□□□ -0.04
NPC1-202ENST00000540608 LIMCH1Q9UPQ0 1083 aa14.81□□□□□ -0.04
NPC1-202ENST00000540608 ZSCAN22P10073 491 aaPredicted RBP14.81□□□□□ -0.04
NPC1-202ENST00000540608 HSP90AB4PQ58FF6 505 aa14.81□□□□□ -0.04
NPC1-202ENST00000540608 NBPF7P0C2Y1 421 aaPredicted RBP14.8□□□□□ -0.04
NPC1-202ENST00000540608 AK2P54819 239 aa14.8□□□□□ -0.04
NPC1-202ENST00000540608 NBPF6Q5VWK0 638 aa14.8□□□□□ -0.04
NPC1-202ENST00000540608 NBPF4Q96M43 638 aa14.8□□□□□ -0.04
NPC1-202ENST00000540608 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.8□□□□□ -0.04
NPC1-202ENST00000540608 USP42Q9H9J4 1324 aaKnown RBP14.8□□□□□ -0.04
NPC1-202ENST00000540608 LETM1O95202 739 aaPredicted RBP14.8□□□□□ -0.04
NPC1-202ENST00000540608 BEND3Q5T5X7 828 aa14.8□□□□□ -0.04
NPC1-202ENST00000540608 RASEFQ8IZ41 740 aa14.8□□□□□ -0.04
NPC1-202ENST00000540608 CHMP4AQ9BY43 222 aa14.8□□□□□ -0.04
NPC1-202ENST00000540608 CEMIPQ8WUJ3 1361 aa14.8□□□□□ -0.04
NPC1-202ENST00000540608 HOXB7P09629 217 aa14.79□□□□□ -0.04
NPC1-202ENST00000540608 CCDC183Q5T5S1 534 aa14.79□□□□□ -0.04
NPC1-202ENST00000540608 RUFY3Q7L099 469 aa14.79□□□□□ -0.04
NPC1-202ENST00000540608 IP6K1Q92551 441 aa14.79□□□□□ -0.04
NPC1-202ENST00000540608 LGR6Q9HBX8 967 aa14.79□□□□□ -0.04
NPC1-202ENST00000540608 EIF2S2P20042 333 aaKnown RBP14.79□□□□□ -0.04
NPC1-202ENST00000540608 EIF4A1P60842 406 aaKnown RBP14.79□□□□□ -0.04
NPC1-202ENST00000540608 SETD1BQ9UPS6 1966 aaKnown RBP14.79□□□□□ -0.04
NPC1-202ENST00000540608 TTC41PQ6P2S7 1318 aa14.79□□□□□ -0.04
NPC1-202ENST00000540608 STX6O43752 255 aa14.79□□□□□ -0.04
NPC1-202ENST00000540608 PTMAP06454 111 aaKnown RBP14.79□□□□□ -0.04
NPC1-202ENST00000540608 DNAAF4Q8WXU2 420 aa14.79□□□□□ -0.04
NPC1-202ENST00000540608 CNPY2Q9Y2B0 182 aa14.79□□□□□ -0.04
NPC1-202ENST00000540608 NFAT5O94916 1531 aa14.78□□□□□ -0.04
NPC1-202ENST00000540608 SYT1P21579 422 aa14.78□□□□□ -0.04
NPC1-202ENST00000540608 UBE2HP62256 183 aa14.78□□□□□ -0.04
NPC1-202ENST00000540608 CWC27Q6UX04 472 aaKnown RBP14.78□□□□□ -0.04
NPC1-202ENST00000540608 TCHHQ07283 1943 aa14.78□□□□□ -0.04
NPC1-202ENST00000540608 ZBTB7CA1YPR0 619 aa14.78□□□□□ -0.04
NPC1-202ENST00000540608 GLRX3O76003 335 aaKnown RBP14.78□□□□□ -0.04
NPC1-202ENST00000540608 KLHL34Q8N239 644 aa14.78□□□□□ -0.04
NPC1-202ENST00000540608 ATP6V1DQ9Y5K8 247 aa14.78□□□□□ -0.04
NPC1-202ENST00000540608 PI4KAP2A4QPH2 592 aa14.77□□□□□ -0.04
NPC1-202ENST00000540608 PI4KAP1Q8N8J0 262 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms