RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 HOXD11P31277 338 aaPredicted RBP10.37□□□□□ -0.75
C2CD3-215ENST00000540452 RGS3P49796 1198 aa10.37□□□□□ -0.75
C2CD3-215ENST00000540452 EVA1CP58658 441 aa10.37□□□□□ -0.75
C2CD3-215ENST00000540452 TTC5Q8N0Z6 440 aa10.37□□□□□ -0.75
C2CD3-215ENST00000540452 DNAAF4Q8WXU2 420 aa10.37□□□□□ -0.75
C2CD3-215ENST00000540452 SRCIN1Q9C0H9 1055 aa10.37□□□□□ -0.75
C2CD3-215ENST00000540452 RNF216Q9NWF9 866 aaPredicted RBP10.37□□□□□ -0.75
C2CD3-215ENST00000540452 COL15A1P39059 1388 aa10.37□□□□□ -0.75
C2CD3-215ENST00000540452 CABP4P57796 275 aa10.36□□□□□ -0.75
C2CD3-215ENST00000540452 BMP2KLQ5H9B9 411 aa10.36□□□□□ -0.75
C2CD3-215ENST00000540452 KSR2Q6VAB6 950 aa10.36□□□□□ -0.75
C2CD3-215ENST00000540452 G2E3Q7L622 706 aa10.36□□□□□ -0.75
C2CD3-215ENST00000540452 SIRT2Q8IXJ6 389 aa10.36□□□□□ -0.75
C2CD3-215ENST00000540452 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
C2CD3-215ENST00000540452 UPF1Q92900 1129 aaKnown RBP eCLIP10.36□□□□□ -0.75
C2CD3-215ENST00000540452 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
C2CD3-215ENST00000540452 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.36□□□□□ -0.75
C2CD3-215ENST00000540452 UTYO14607 1347 aa10.35□□□□□ -0.75
C2CD3-215ENST00000540452 KCPQ6ZWJ8 1503 aa10.35□□□□□ -0.75
C2CD3-215ENST00000540452 MTX1Q13505 466 aa10.35□□□□□ -0.75
C2CD3-215ENST00000540452 IPO9Q96P70 1041 aaKnown RBP10.35□□□□□ -0.75
C2CD3-215ENST00000540452 MEIS3Q99687 375 aa10.35□□□□□ -0.75
C2CD3-215ENST00000540452 TEX13AQ9BXU3 409 aaPredicted RBP10.35□□□□□ -0.75
C2CD3-215ENST00000540452 UPF2Q9HAU5 1272 aaKnown RBP10.35□□□□□ -0.75
C2CD3-215ENST00000540452 CHPF2Q9P2E5 772 aa10.35□□□□□ -0.75
C2CD3-215ENST00000540452 TOGARAM1Q9Y4F4 1720 aa10.35□□□□□ -0.75
C2CD3-215ENST00000540452 ITGB4P16144 1822 aa10.35□□□□□ -0.75
C2CD3-215ENST00000540452 SLIT2O94813 1529 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 NPM3O75607 178 aaKnown RBP10.34□□□□□ -0.75
C2CD3-215ENST00000540452 UBTFL1P0CB47 393 aaPredicted RBP10.34□□□□□ -0.75
C2CD3-215ENST00000540452 ATP8B2P98198 1209 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 HSP90AB4PQ58FF6 505 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 BEND3Q5T5X7 828 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 SLC4A10Q6U841 1118 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 NFATC2IPQ8NCF5 419 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 LINS1Q8NG48 757 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 OSBPL3Q9H4L5 887 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 ADCY9O60503 1353 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 ZNF831Q5JPB2 1677 aa10.34□□□□□ -0.75
C2CD3-215ENST00000540452 RAB11FIP3O75154 756 aa10.33□□□□□ -0.76
C2CD3-215ENST00000540452 LARP1Q6PKG0 1096 aaKnown RBP10.33□□□□□ -0.76
C2CD3-215ENST00000540452 SSH3Q8TE77 659 aa10.33□□□□□ -0.76
C2CD3-215ENST00000540452 USP44Q9H0E7 712 aa10.33□□□□□ -0.76
C2CD3-215ENST00000540452 BTG4Q9NY30 223 aa10.33□□□□□ -0.76
C2CD3-215ENST00000540452 ARFGEF2Q9Y6D5 1785 aa10.33□□□□□ -0.76
C2CD3-215ENST00000540452 AOX1Q06278 1338 aa10.33□□□□□ -0.76
C2CD3-215ENST00000540452 PI4KAP2A4QPH2 592 aa10.32□□□□□ -0.76
C2CD3-215ENST00000540452 F6X3S4 739 aa10.32□□□□□ -0.76
C2CD3-215ENST00000540452 KCNQ3O43525 872 aa10.32□□□□□ -0.76
C2CD3-215ENST00000540452 EIF2S2P20042 333 aaKnown RBP10.32□□□□□ -0.76
C2CD3-215ENST00000540452 PDIA6Q15084 440 aa10.32□□□□□ -0.76
C2CD3-215ENST00000540452 ZNF772Q68DY9 489 aaPredicted RBP10.32□□□□□ -0.76
C2CD3-215ENST00000540452 PI4KAP1Q8N8J0 262 aa10.32□□□□□ -0.76
C2CD3-215ENST00000540452 IL27Q8NEV9 243 aa10.32□□□□□ -0.76
C2CD3-215ENST00000540452 ZNF496Q96IT1 587 aaPredicted RBP10.32□□□□□ -0.76
C2CD3-215ENST00000540452 PHAXQ9H814 394 aaKnown RBP10.32□□□□□ -0.76
C2CD3-215ENST00000540452 NUP188Q5SRE5 1749 aa10.32□□□□□ -0.76
C2CD3-215ENST00000540452 JCADQ9P266 1359 aa10.31□□□□□ -0.76
C2CD3-215ENST00000540452 NEXNQ0ZGT2 675 aa10.31□□□□□ -0.76
C2CD3-215ENST00000540452 POLA2Q14181 598 aa10.31□□□□□ -0.76
C2CD3-215ENST00000540452 ANKRD45Q5TZF3 282 aa10.31□□□□□ -0.76
C2CD3-215ENST00000540452 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
C2CD3-215ENST00000540452 TUBGCP6Q96RT7 1819 aa10.3□□□□□ -0.76
C2CD3-215ENST00000540452 PLEKHG5O94827 1062 aa10.3□□□□□ -0.76
C2CD3-215ENST00000540452 LRP10Q7Z4F1 713 aa10.3□□□□□ -0.76
C2CD3-215ENST00000540452 LNPKQ9C0E8 428 aa10.3□□□□□ -0.76
C2CD3-215ENST00000540452 STRN4Q9NRL3 753 aa10.3□□□□□ -0.76
C2CD3-215ENST00000540452 BCL9O00512 1426 aa10.3□□□□□ -0.76
C2CD3-215ENST00000540452 AFDNP55196 1824 aaKnown RBP10.3□□□□□ -0.76
C2CD3-215ENST00000540452 SPATA31A6Q5VVP1 1343 aa10.3□□□□□ -0.76
C2CD3-215ENST00000540452 ERC1Q8IUD2 1116 aa10.29□□□□□ -0.76
C2CD3-215ENST00000540452 METTL22Q9BUU2 404 aaPredicted RBP10.29□□□□□ -0.76
C2CD3-215ENST00000540452 LRRCC1Q9C099 1032 aa10.29□□□□□ -0.76
C2CD3-215ENST00000540452 C1orf115Q9H7X2 142 aa10.29□□□□□ -0.76
C2CD3-215ENST00000540452 TMOD3Q9NYL9 352 aa10.29□□□□□ -0.76
C2CD3-215ENST00000540452 MAP3K2Q9Y2U5 619 aa10.29□□□□□ -0.76
C2CD3-215ENST00000540452 NOP58Q9Y2X3 529 aaKnown RBP10.29□□□□□ -0.76
C2CD3-215ENST00000540452 SPATA31A1Q5TZJ5 1347 aa10.29□□□□□ -0.76
C2CD3-215ENST00000540452 GRM8O00222 908 aa10.28□□□□□ -0.76
C2CD3-215ENST00000540452 EXOC5O00471 708 aa10.28□□□□□ -0.76
C2CD3-215ENST00000540452 EPB41L2O43491 1005 aaKnown RBP10.28□□□□□ -0.76
C2CD3-215ENST00000540452 MEX3CQ5U5Q3 659 aaKnown RBP10.28□□□□□ -0.76
C2CD3-215ENST00000540452 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
C2CD3-215ENST00000540452 PLBD2Q8NHP8 589 aa10.28□□□□□ -0.76
C2CD3-215ENST00000540452 TBC1D32Q96NH3 1257 aa10.28□□□□□ -0.76
C2CD3-215ENST00000540452 SPATA31A5Q5VU36 1347 aa10.28□□□□□ -0.76
C2CD3-215ENST00000540452 SPATA31A7Q8IWB4 1347 aa10.28□□□□□ -0.76
C2CD3-215ENST00000540452 SALL3Q9BXA9 1300 aa10.28□□□□□ -0.76
C2CD3-215ENST00000540452 RREB1Q92766 1687 aa10.28□□□□□ -0.76
C2CD3-215ENST00000540452 DOT1LQ8TEK3 1739 aa10.27□□□□□ -0.76
C2CD3-215ENST00000540452 SLC39A6Q13433 755 aa10.27□□□□□ -0.77
C2CD3-215ENST00000540452 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
C2CD3-215ENST00000540452 SKAP1Q86WV1 359 aa10.27□□□□□ -0.77
C2CD3-215ENST00000540452 NECTIN2Q92692 538 aa10.27□□□□□ -0.77
C2CD3-215ENST00000540452 KIF1BPQ96EK5 621 aa10.27□□□□□ -0.77
C2CD3-215ENST00000540452 STAP2Q9UGK3 403 aa10.27□□□□□ -0.77
C2CD3-215ENST00000540452 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
C2CD3-215ENST00000540452 CDC45O75419 566 aa10.26□□□□□ -0.77
C2CD3-215ENST00000540452 TTC22Q5TAA0 569 aa10.26□□□□□ -0.77
C2CD3-215ENST00000540452 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms