RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 MLLT1Q03111 559 aaPredicted RBP15.34■□□□□ 0.05
TMEM258-205ENST00000540434 SLC4A9Q96Q91 983 aa15.34■□□□□ 0.05
TMEM258-205ENST00000540434 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.34■□□□□ 0.05
TMEM258-205ENST00000540434 SPG7Q9UQ90 795 aa15.34■□□□□ 0.05
TMEM258-205ENST00000540434 CCDC88AQ3V6T2 1871 aa15.33■□□□□ 0.05
TMEM258-205ENST00000540434 U2SURPO15042 1029 aaKnown RBP15.33■□□□□ 0.04
TMEM258-205ENST00000540434 CREBZFQ9NS37 354 aa15.33■□□□□ 0.04
TMEM258-205ENST00000540434 TMOD3Q9NYL9 352 aa15.33■□□□□ 0.04
TMEM258-205ENST00000540434 RTCBQ9Y3I0 505 aaKnown RBP15.33■□□□□ 0.04
TMEM258-205ENST00000540434 CCDC85CA6NKD9 419 aa15.32■□□□□ 0.04
TMEM258-205ENST00000540434 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
TMEM258-205ENST00000540434 VEGFBP49765 207 aa15.31■□□□□ 0.04
TMEM258-205ENST00000540434 DDR1Q08345 913 aa15.31■□□□□ 0.04
TMEM258-205ENST00000540434 MTHFSDQ2M296 383 aaKnown RBP15.31■□□□□ 0.04
TMEM258-205ENST00000540434 PLEKHO1Q53GL0 409 aaPredicted RBP15.31■□□□□ 0.04
TMEM258-205ENST00000540434 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
TMEM258-205ENST00000540434 ZNF530Q6P9A1 599 aaPredicted RBP15.31■□□□□ 0.04
TMEM258-205ENST00000540434 IFNL2Q8IZJ0 200 aa15.31■□□□□ 0.04
TMEM258-205ENST00000540434 AIDAQ96BJ3 306 aa15.31■□□□□ 0.04
TMEM258-205ENST00000540434 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
TMEM258-205ENST00000540434 CNTNAP1P78357 1384 aa15.31■□□□□ 0.04
TMEM258-205ENST00000540434 KDM6AO15550 1401 aaPredicted RBP15.3■□□□□ 0.04
TMEM258-205ENST00000540434 ADRA2BP18089 450 aa15.3■□□□□ 0.04
TMEM258-205ENST00000540434 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
TMEM258-205ENST00000540434 PRKRIP1Q9H875 184 aaPredicted RBP15.3■□□□□ 0.04
TMEM258-205ENST00000540434 RPS6KA4O75676 772 aa15.29■□□□□ 0.04
TMEM258-205ENST00000540434 HSPA8P11142 646 aaKnown RBP15.29■□□□□ 0.04
TMEM258-205ENST00000540434 LMNB1P20700 586 aa15.29■□□□□ 0.04
TMEM258-205ENST00000540434 RFC4P35249 363 aa15.29■□□□□ 0.04
TMEM258-205ENST00000540434 RALBP1Q15311 655 aa15.29■□□□□ 0.04
TMEM258-205ENST00000540434 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
TMEM258-205ENST00000540434 TIAM2Q8IVF5 1701 aa15.29■□□□□ 0.04
TMEM258-205ENST00000540434 FKBP8Q14318 412 aa15.28■□□□□ 0.04
TMEM258-205ENST00000540434 CCDC184Q52MB2 194 aa15.28■□□□□ 0.04
TMEM258-205ENST00000540434 CFAP53Q96M91 514 aa15.28■□□□□ 0.04
TMEM258-205ENST00000540434 WBP1LQ9NX94 342 aa15.28■□□□□ 0.04
TMEM258-205ENST00000540434 CNTNAP4Q9C0A0 1308 aa15.27■□□□□ 0.04
TMEM258-205ENST00000540434 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.04
TMEM258-205ENST00000540434 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.04
TMEM258-205ENST00000540434 AMOTQ4VCS5 1084 aa15.27■□□□□ 0.04
TMEM258-205ENST00000540434 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
TMEM258-205ENST00000540434 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
TMEM258-205ENST00000540434 ZC3H4Q9UPT8 1303 aaKnown RBP15.26■□□□□ 0.03
TMEM258-205ENST00000540434 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
TMEM258-205ENST00000540434 RGS19P49795 217 aa15.26■□□□□ 0.03
TMEM258-205ENST00000540434 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
TMEM258-205ENST00000540434 ADAMTS7Q9UKP4 1686 aa15.25■□□□□ 0.03
TMEM258-205ENST00000540434 AFDNP55196 1824 aaKnown RBP15.24■□□□□ 0.03
TMEM258-205ENST00000540434 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
TMEM258-205ENST00000540434 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
TMEM258-205ENST00000540434 NFKBIEO00221 500 aa15.24■□□□□ 0.03
TMEM258-205ENST00000540434 POLRMTO00411 1230 aaKnown RBP15.23■□□□□ 0.03
TMEM258-205ENST00000540434 AKAP4Q5JQC9 854 aa15.23■□□□□ 0.03
TMEM258-205ENST00000540434 NFATC2IPQ8NCF5 419 aa15.23■□□□□ 0.03
TMEM258-205ENST00000540434 PLEKHF1Q96S99 279 aa15.23■□□□□ 0.03
TMEM258-205ENST00000540434 NUDCQ9Y266 331 aa15.23■□□□□ 0.03
TMEM258-205ENST00000540434 PASKQ96RG2 1323 aa15.22■□□□□ 0.03
TMEM258-205ENST00000540434 DLEC1Q9Y238 1755 aa15.22■□□□□ 0.03
TMEM258-205ENST00000540434 ERVV-2B6SEH9 535 aa15.22■□□□□ 0.03
TMEM258-205ENST00000540434 RNMTO43148 476 aaKnown RBP15.22■□□□□ 0.03
TMEM258-205ENST00000540434 TM4SF1P30408 202 aa15.22■□□□□ 0.03
TMEM258-205ENST00000540434 IL17REQ8NFR9 667 aa15.22■□□□□ 0.03
TMEM258-205ENST00000540434 CFAP44Q96MT7 982 aa15.22■□□□□ 0.03
TMEM258-205ENST00000540434 TNRC18O15417 2968 aaPredicted RBP15.22■□□□□ 0.03
TMEM258-205ENST00000540434 USP42Q9H9J4 1324 aaKnown RBP15.21■□□□□ 0.03
TMEM258-205ENST00000540434 DDNO94850 711 aaPredicted RBP15.21■□□□□ 0.03
TMEM258-205ENST00000540434 C1orf141Q5JVX7 400 aa15.21■□□□□ 0.03
TMEM258-205ENST00000540434 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
TMEM258-205ENST00000540434 DICER1Q9UPY3 1922 aaKnown RBP15.21■□□□□ 0.02
TMEM258-205ENST00000540434 DPY19L2Q6NUT2 758 aa15.2■□□□□ 0.02
TMEM258-205ENST00000540434 TJP1Q07157 1748 aa15.2■□□□□ 0.02
TMEM258-205ENST00000540434 HSP90AB1P08238 724 aaKnown RBP15.19■□□□□ 0.02
TMEM258-205ENST00000540434 CABP4P57796 275 aa15.19■□□□□ 0.02
TMEM258-205ENST00000540434 NRXN2Q9P2S2 1712 aa15.19■□□□□ 0.02
TMEM258-205ENST00000540434 TMEM88BA6NKF7 163 aa15.18■□□□□ 0.02
TMEM258-205ENST00000540434 CRKLP46109 303 aaKnown RBP15.18■□□□□ 0.02
TMEM258-205ENST00000540434 SLC39A6Q13433 755 aa15.18■□□□□ 0.02
TMEM258-205ENST00000540434 DCTN1Q14203 1278 aa15.18■□□□□ 0.02
TMEM258-205ENST00000540434 TSKSQ9UJT2 592 aa15.18■□□□□ 0.02
TMEM258-205ENST00000540434 ERFEQ4G0M1 354 aa15.17■□□□□ 0.02
TMEM258-205ENST00000540434 TTLL6Q8N841 843 aa15.17■□□□□ 0.02
TMEM258-205ENST00000540434 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
TMEM258-205ENST00000540434 ADAMTS8Q9UP79 889 aa15.17■□□□□ 0.02
TMEM258-205ENST00000540434 DLG5Q8TDM6 1919 aa15.17■□□□□ 0.02
TMEM258-205ENST00000540434 GNAT3A8MTJ3 354 aa15.16■□□□□ 0.02
TMEM258-205ENST00000540434 ITGBL1O95965 494 aaPredicted RBP15.16■□□□□ 0.02
TMEM258-205ENST00000540434 USPL1Q5W0Q7 1092 aa15.16■□□□□ 0.02
TMEM258-205ENST00000540434 INTS5Q6P9B9 1019 aaKnown RBP15.16■□□□□ 0.02
TMEM258-205ENST00000540434 MCM10Q7L590 875 aa15.16■□□□□ 0.02
TMEM258-205ENST00000540434 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
TMEM258-205ENST00000540434 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
TMEM258-205ENST00000540434 MRC1P22897 1456 aa15.15■□□□□ 0.02
TMEM258-205ENST00000540434 FER1L6Q2WGJ9 1857 aa15.15■□□□□ 0.02
TMEM258-205ENST00000540434 KCNQ3O43525 872 aa15.15■□□□□ 0.02
TMEM258-205ENST00000540434 PTCD1O75127 700 aaKnown RBP15.15■□□□□ 0.02
TMEM258-205ENST00000540434 DEFB115Q30KQ5 88 aa15.15■□□□□ 0.02
TMEM258-205ENST00000540434 C2CD5Q86YS7 1000 aa15.15■□□□□ 0.02
TMEM258-205ENST00000540434 SIPA1L3O60292 1781 aaPredicted RBP15.15■□□□□ 0.02
TMEM258-205ENST00000540434 WDR33Q9C0J8 1336 aaKnown RBP15.15■□□□□ 0.02
TMEM258-205ENST00000540434 CARMIL3Q8ND23 1372 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms