RNA–Protein interactions for RNA: ENST00000540378.1

LRTM2-204, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-204ENST00000540378 BRCA1P38398 1863 aaKnown RBP20.52■□□□□ 0.87
LRTM2-204ENST00000540378 POLRMTO00411 1230 aaKnown RBP20.51■□□□□ 0.87
LRTM2-204ENST00000540378 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
LRTM2-204ENST00000540378 PRKAR2BP31323 418 aa20.5■□□□□ 0.87
LRTM2-204ENST00000540378 IL17REQ8NFR9 667 aa20.5■□□□□ 0.87
LRTM2-204ENST00000540378 PIM2Q9P1W9 311 aa20.5■□□□□ 0.87
LRTM2-204ENST00000540378 NARFQ9UHQ1 456 aa20.5■□□□□ 0.87
LRTM2-204ENST00000540378 KCNA3P22001 575 aa20.49■□□□□ 0.87
LRTM2-204ENST00000540378 TM4SF1P30408 202 aa20.49■□□□□ 0.87
LRTM2-204ENST00000540378 STARD3NLO95772 234 aa20.48■□□□□ 0.87
LRTM2-204ENST00000540378 CHRNA5P30532 468 aa20.48■□□□□ 0.87
LRTM2-204ENST00000540378 DALRD3Q5D0E6 543 aaKnown RBP20.48■□□□□ 0.87
LRTM2-204ENST00000540378 ZNF496Q96IT1 587 aaPredicted RBP20.48■□□□□ 0.87
LRTM2-204ENST00000540378 RSPH6AQ9H0K4 717 aa20.48■□□□□ 0.87
LRTM2-204ENST00000540378 NUDCQ9Y266 331 aa20.48■□□□□ 0.87
LRTM2-204ENST00000540378 SIPA1L3O60292 1781 aaPredicted RBP20.47■□□□□ 0.87
LRTM2-204ENST00000540378 NFIXQ14938 502 aa20.47■□□□□ 0.87
LRTM2-204ENST00000540378 ZNF790Q6PG37 636 aa20.47■□□□□ 0.87
LRTM2-204ENST00000540378 PHACTR3Q96KR7 559 aa20.47■□□□□ 0.87
LRTM2-204ENST00000540378 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
LRTM2-204ENST00000540378 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
LRTM2-204ENST00000540378 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
LRTM2-204ENST00000540378 PPP2R1AP30153 589 aa20.46■□□□□ 0.87
LRTM2-204ENST00000540378 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
LRTM2-204ENST00000540378 ZNF330Q9Y3S2 320 aaPredicted RBP20.46■□□□□ 0.87
LRTM2-204ENST00000540378 BCL2L12Q9HB09 334 aa20.45■□□□□ 0.86
LRTM2-204ENST00000540378 CEMIPQ8WUJ3 1361 aa20.45■□□□□ 0.86
LRTM2-204ENST00000540378 AFDNP55196 1824 aaKnown RBP20.44■□□□□ 0.86
LRTM2-204ENST00000540378 FMNL2Q96PY5 1086 aa20.44■□□□□ 0.86
LRTM2-204ENST00000540378 A0A087WZG4 1122 aa20.43■□□□□ 0.86
LRTM2-204ENST00000540378 BTBD11A6QL63 1104 aa20.43■□□□□ 0.86
LRTM2-204ENST00000540378 KIF3CO14782 793 aa20.43■□□□□ 0.86
LRTM2-204ENST00000540378 SERPINB2P05120 415 aa20.43■□□□□ 0.86
LRTM2-204ENST00000540378 EIF5P55010 431 aaKnown RBP20.43■□□□□ 0.86
LRTM2-204ENST00000540378 BICDL1Q6ZP65 573 aa20.43■□□□□ 0.86
LRTM2-204ENST00000540378 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
LRTM2-204ENST00000540378 NRXN2Q9P2S2 1712 aa20.42■□□□□ 0.86
LRTM2-204ENST00000540378 C9orf131Q5VYM1 1079 aa20.42■□□□□ 0.86
LRTM2-204ENST00000540378 KCNQ3O43525 872 aa20.41■□□□□ 0.86
LRTM2-204ENST00000540378 RTF1Q92541 710 aaKnown RBP20.41■□□□□ 0.86
LRTM2-204ENST00000540378 SCN7AQ01118 1682 aa20.41■□□□□ 0.86
LRTM2-204ENST00000540378 NPM2Q86SE8 214 aaKnown RBP20.4■□□□□ 0.86
LRTM2-204ENST00000540378 CARMIL3Q8ND23 1372 aa20.4■□□□□ 0.86
LRTM2-204ENST00000540378 A1BGP04217 495 aa20.39■□□□□ 0.85
LRTM2-204ENST00000540378 MCM10Q7L590 875 aa20.39■□□□□ 0.85
LRTM2-204ENST00000540378 RNF181Q9P0P0 153 aa20.39■□□□□ 0.85
LRTM2-204ENST00000540378 TBC1D2BQ9UPU7 963 aa20.39■□□□□ 0.85
LRTM2-204ENST00000540378 HSPA6P17066 643 aa20.38■□□□□ 0.85
LRTM2-204ENST00000540378 IL6STP40189 918 aaPredicted RBP20.38■□□□□ 0.85
LRTM2-204ENST00000540378 TBC1D9BQ66K14 1250 aa20.38■□□□□ 0.85
LRTM2-204ENST00000540378 C2CD5Q86YS7 1000 aa20.37■□□□□ 0.85
LRTM2-204ENST00000540378 NMRK2Q9NPI5 230 aa20.37■□□□□ 0.85
LRTM2-204ENST00000540378 DLEC1Q9Y238 1755 aa20.36■□□□□ 0.85
LRTM2-204ENST00000540378 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
LRTM2-204ENST00000540378 PIP4K2AP48426 406 aaPredicted RBP20.35■□□□□ 0.85
LRTM2-204ENST00000540378 RASSF7Q02833 373 aa20.35■□□□□ 0.85
LRTM2-204ENST00000540378 H0YIN7 160 aa20.34■□□□□ 0.85
LRTM2-204ENST00000540378 TTLL6Q8N841 843 aa20.34■□□□□ 0.85
LRTM2-204ENST00000540378 USP16Q9Y5T5 823 aa20.34■□□□□ 0.85
LRTM2-204ENST00000540378 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.85
LRTM2-204ENST00000540378 NPHP1O15259 732 aa20.33■□□□□ 0.85
LRTM2-204ENST00000540378 NEFMP07197 916 aa20.33■□□□□ 0.85
LRTM2-204ENST00000540378 DZIP3Q86Y13 1208 aaKnown RBP20.33■□□□□ 0.85
LRTM2-204ENST00000540378 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
LRTM2-204ENST00000540378 TOMM70O94826 608 aa20.32■□□□□ 0.84
LRTM2-204ENST00000540378 CAMTA2O94983 1202 aa20.32■□□□□ 0.84
LRTM2-204ENST00000540378 SNRPA1P09661 255 aaKnown RBP20.32■□□□□ 0.84
LRTM2-204ENST00000540378 PRR5LQ6MZQ0 368 aa20.32■□□□□ 0.84
LRTM2-204ENST00000540378 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
LRTM2-204ENST00000540378 KDM2BQ8NHM5 1336 aa20.31■□□□□ 0.84
LRTM2-204ENST00000540378 ANKRD31Q8N7Z5 1873 aa20.31■□□□□ 0.84
LRTM2-204ENST00000540378 HTATSF1O43719 755 aaKnown RBP20.31■□□□□ 0.84
LRTM2-204ENST00000540378 ZNF622Q969S3 477 aaKnown RBP eCLIP20.31■□□□□ 0.84
LRTM2-204ENST00000540378 SETDB2Q96T68 719 aa20.31■□□□□ 0.84
LRTM2-204ENST00000540378 SBF1O95248 1867 aa20.3■□□□□ 0.84
LRTM2-204ENST00000540378 PDE6BP35913 854 aa20.3■□□□□ 0.84
LRTM2-204ENST00000540378 C16orf71Q8IYS4 520 aaPredicted RBP20.3■□□□□ 0.84
LRTM2-204ENST00000540378 CNBD1Q8NA66 436 aa20.3■□□□□ 0.84
LRTM2-204ENST00000540378 COL11A2P13942 1736 aaPredicted RBP20.3■□□□□ 0.84
LRTM2-204ENST00000540378 CEP350Q5VT06 3117 aa20.29■□□□□ 0.84
LRTM2-204ENST00000540378 BRIP1Q9BX63 1249 aa20.29■□□□□ 0.84
LRTM2-204ENST00000540378 LMNB1P20700 586 aa20.28■□□□□ 0.84
LRTM2-204ENST00000540378 ST5P78524 1137 aa20.28■□□□□ 0.84
LRTM2-204ENST00000540378 ZNF219Q9P2Y4 722 aaPredicted RBP20.28■□□□□ 0.84
LRTM2-204ENST00000540378 PDZRN3Q9UPQ7 1066 aa20.28■□□□□ 0.84
LRTM2-204ENST00000540378 TAF7Q15545 349 aaPredicted RBP20.27■□□□□ 0.84
LRTM2-204ENST00000540378 MIS18AQ9NYP9 233 aa20.27■□□□□ 0.84
LRTM2-204ENST00000540378 ZNF652Q9Y2D9 606 aa20.27■□□□□ 0.84
LRTM2-204ENST00000540378 TNRC6CQ9HCJ0 1690 aaKnown RBP20.26■□□□□ 0.83
LRTM2-204ENST00000540378 RRAGCQ9HB90 399 aa20.26■□□□□ 0.83
LRTM2-204ENST00000540378 ZC3H4Q9UPT8 1303 aaKnown RBP20.26■□□□□ 0.83
LRTM2-204ENST00000540378 NFKBIEO00221 500 aa20.25■□□□□ 0.83
LRTM2-204ENST00000540378 APLP1P51693 650 aa20.25■□□□□ 0.83
LRTM2-204ENST00000540378 PRELPP51888 382 aa20.25■□□□□ 0.83
LRTM2-204ENST00000540378 RBM46Q8TBY0 533 aaKnown RBP20.25■□□□□ 0.83
LRTM2-204ENST00000540378 DLG5Q8TDM6 1919 aa20.25■□□□□ 0.83
LRTM2-204ENST00000540378 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
LRTM2-204ENST00000540378 TIAM2Q8IVF5 1701 aa20.24■□□□□ 0.83
LRTM2-204ENST00000540378 LAMB4A4D0S4 1761 aa20.24■□□□□ 0.83
LRTM2-204ENST00000540378 NBPF26B4DH59 902 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms