RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 BICC1Q9H694 974 aaKnown RBP12.91□□□□□ -0.34
PBX1-212ENST00000540236 CAPN7Q9Y6W3 813 aa12.91□□□□□ -0.34
PBX1-212ENST00000540236 GCKP35557 465 aa12.91□□□□□ -0.34
PBX1-212ENST00000540236 DNA2P51530 1060 aa12.91□□□□□ -0.34
PBX1-212ENST00000540236 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
PBX1-212ENST00000540236 PRPF40BQ6NWY9 871 aaKnown RBP12.91□□□□□ -0.34
PBX1-212ENST00000540236 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
PBX1-212ENST00000540236 CXorf56Q9H5V9 222 aa12.91□□□□□ -0.34
PBX1-212ENST00000540236 GOLGA5Q8TBA6 731 aa12.91□□□□□ -0.34
PBX1-212ENST00000540236 OLFM4Q6UX06 510 aa12.9□□□□□ -0.34
PBX1-212ENST00000540236 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.34
PBX1-212ENST00000540236 LZTFL1Q9NQ48 299 aa12.9□□□□□ -0.34
PBX1-212ENST00000540236 F13A1P00488 732 aa12.9□□□□□ -0.34
PBX1-212ENST00000540236 CCAR1Q8IX12 1150 aaKnown RBP12.9□□□□□ -0.34
PBX1-212ENST00000540236 N4BP2L2Q92802 583 aaPredicted RBP12.9□□□□□ -0.34
PBX1-212ENST00000540236 CRACR2AQ9BSW2 395 aa12.9□□□□□ -0.34
PBX1-212ENST00000540236 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.9□□□□□ -0.34
PBX1-212ENST00000540236 ZNF853P0CG23 659 aa12.9□□□□□ -0.34
PBX1-212ENST00000540236 ZKSCAN1P17029 563 aaPredicted RBP12.9□□□□□ -0.34
PBX1-212ENST00000540236 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
PBX1-212ENST00000540236 CEP57L1Q8IYX8 460 aa12.9□□□□□ -0.34
PBX1-212ENST00000540236 SYT1P21579 422 aa12.89□□□□□ -0.35
PBX1-212ENST00000540236 HDAC1Q13547 482 aaPredicted RBP12.89□□□□□ -0.35
PBX1-212ENST00000540236 ODF2Q5BJF6 829 aa12.89□□□□□ -0.35
PBX1-212ENST00000540236 PNMA6AP0CW24 399 aaPredicted RBP12.89□□□□□ -0.35
PBX1-212ENST00000540236 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
PBX1-212ENST00000540236 CAPZA3Q96KX2 299 aa12.89□□□□□ -0.35
PBX1-212ENST00000540236 RAD50Q92878 1312 aa12.89□□□□□ -0.35
PBX1-212ENST00000540236 CYP2C19P33261 490 aa12.89□□□□□ -0.35
PBX1-212ENST00000540236 EIF3CLB5ME19 914 aaKnown RBP12.88□□□□□ -0.35
PBX1-212ENST00000540236 EIF3CQ99613 913 aaKnown RBP12.88□□□□□ -0.35
PBX1-212ENST00000540236 IFNKQ9P0W0 207 aa12.88□□□□□ -0.35
PBX1-212ENST00000540236 G3BP2Q9UN86 482 aaKnown RBP12.88□□□□□ -0.35
PBX1-212ENST00000540236 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.88□□□□□ -0.35
PBX1-212ENST00000540236 EIF2S2P20042 333 aaKnown RBP12.88□□□□□ -0.35
PBX1-212ENST00000540236 ANKRD36BQ8N2N9 1353 aa12.88□□□□□ -0.35
PBX1-212ENST00000540236 IRAK4Q9NWZ3 460 aa12.88□□□□□ -0.35
PBX1-212ENST00000540236 CACTINQ8WUQ7 758 aaKnown RBP12.87□□□□□ -0.35
PBX1-212ENST00000540236 DYDC1Q8WWB3 177 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 CYP46A1Q9Y6A2 500 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
PBX1-212ENST00000540236 GEMIN8Q9NWZ8 242 aaKnown RBP12.87□□□□□ -0.35
PBX1-212ENST00000540236 E2F5Q15329 346 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 CCDC181Q5TID7 509 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 FAN1Q9Y2M0 1017 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 TOP1P11387 765 aaKnown RBP12.87□□□□□ -0.35
PBX1-212ENST00000540236 TRHP20396 242 aaPredicted RBP12.87□□□□□ -0.35
PBX1-212ENST00000540236 INPP5BP32019 993 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 LONRF3Q496Y0 759 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 OTUD6BQ8N6M0 293 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 MRFAP1L1Q96HT8 127 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
PBX1-212ENST00000540236 GOLGA6L7A0A1B0GV03 622 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 ATP2B1P20020 1258 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 GOLGA1Q92805 767 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 TBC1D31Q96DN5 1066 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 CCT5P48643 541 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 BIN2Q9UBW5 565 aaPredicted RBP12.86□□□□□ -0.35
PBX1-212ENST00000540236 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 STX1AQ16623 288 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 FBXW10Q5XX13 1052 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 LRRC8AQ8IWT6 810 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 KIRREL3Q8IZU9 778 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 AFAP1L1Q8TED9 768 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
PBX1-212ENST00000540236 EBAG9O00559 213 aa12.85□□□□□ -0.35
PBX1-212ENST00000540236 GSPT1P15170 499 aaKnown RBP12.85□□□□□ -0.35
PBX1-212ENST00000540236 API5Q9BZZ5 524 aaKnown RBP12.85□□□□□ -0.35
PBX1-212ENST00000540236 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
PBX1-212ENST00000540236 PLEKHM2Q8IWE5 1019 aa12.85□□□□□ -0.35
PBX1-212ENST00000540236 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
PBX1-212ENST00000540236 SLC52A1Q9NWF4 448 aa12.85□□□□□ -0.35
PBX1-212ENST00000540236 RPRD2Q5VT52 1461 aaKnown RBP12.85□□□□□ -0.35
PBX1-212ENST00000540236 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
PBX1-212ENST00000540236 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
PBX1-212ENST00000540236 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
PBX1-212ENST00000540236 HOOK1Q9UJC3 728 aaKnown RBP12.85□□□□□ -0.35
PBX1-212ENST00000540236 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
PBX1-212ENST00000540236 STK38Q15208 465 aa12.85□□□□□ -0.35
PBX1-212ENST00000540236 ZSCAN12O43309 604 aa12.84□□□□□ -0.35
PBX1-212ENST00000540236 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
PBX1-212ENST00000540236 MRFAP1Q9Y605 127 aa12.84□□□□□ -0.35
PBX1-212ENST00000540236 BRMS1Q9HCU9 246 aa12.84□□□□□ -0.35
PBX1-212ENST00000540236 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
PBX1-212ENST00000540236 MRVI1Q9Y6F6 885 aa12.84□□□□□ -0.35
PBX1-212ENST00000540236 BLMP54132 1417 aaPredicted RBP12.84□□□□□ -0.35
PBX1-212ENST00000540236 HDXQ7Z353 690 aa12.84□□□□□ -0.35
PBX1-212ENST00000540236 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
PBX1-212ENST00000540236 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.35
PBX1-212ENST00000540236 ACTN2P35609 894 aa12.83□□□□□ -0.35
PBX1-212ENST00000540236 RAB11FIP4Q86YS3 637 aa12.83□□□□□ -0.35
PBX1-212ENST00000540236 FSIP1Q8NA03 581 aa12.83□□□□□ -0.35
PBX1-212ENST00000540236 AK2P54819 239 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 SRLQ86TD4 932 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms