RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 PER1O15534 1290 aaPredicted RBP19.34■□□□□ 0.69
SEMA4D-222ENST00000540183 CYP19A1P11511 503 aaPredicted RBP19.34■□□□□ 0.69
SEMA4D-222ENST00000540183 TM4SF1P30408 202 aa19.34■□□□□ 0.69
SEMA4D-222ENST00000540183 COL3A1P02461 1466 aaPredicted RBP19.34■□□□□ 0.69
SEMA4D-222ENST00000540183 C9orf131Q5VYM1 1079 aa19.33■□□□□ 0.68
SEMA4D-222ENST00000540183 PIM2Q9P1W9 311 aa19.33■□□□□ 0.68
SEMA4D-222ENST00000540183 DIAPH1O60610 1272 aaKnown RBP19.32■□□□□ 0.68
SEMA4D-222ENST00000540183 ZBTB1Q9Y2K1 713 aa19.32■□□□□ 0.68
SEMA4D-222ENST00000540183 COL15A1P39059 1388 aa19.32■□□□□ 0.68
SEMA4D-222ENST00000540183 ANKRD31Q8N7Z5 1873 aa19.31■□□□□ 0.68
SEMA4D-222ENST00000540183 ZPR1O75312 459 aa19.31■□□□□ 0.68
SEMA4D-222ENST00000540183 DALRD3Q5D0E6 543 aaKnown RBP19.31■□□□□ 0.68
SEMA4D-222ENST00000540183 BCL2L12Q9HB09 334 aa19.3■□□□□ 0.68
SEMA4D-222ENST00000540183 WDR90Q96KV7 1748 aa19.29■□□□□ 0.68
SEMA4D-222ENST00000540183 NFIXQ14938 502 aa19.29■□□□□ 0.68
SEMA4D-222ENST00000540183 CACNA1SQ13698 1873 aa19.28■□□□□ 0.68
SEMA4D-222ENST00000540183 NARFQ9UHQ1 456 aa19.28■□□□□ 0.68
SEMA4D-222ENST00000540183 SCN7AQ01118 1682 aa19.27■□□□□ 0.68
SEMA4D-222ENST00000540183 TNRC6CQ9HCJ0 1690 aaKnown RBP19.27■□□□□ 0.68
SEMA4D-222ENST00000540183 TOMM70O94826 608 aa19.27■□□□□ 0.68
SEMA4D-222ENST00000540183 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.68
SEMA4D-222ENST00000540183 RNF181Q9P0P0 153 aa19.27■□□□□ 0.68
SEMA4D-222ENST00000540183 CARMIL3Q8ND23 1372 aa19.27■□□□□ 0.68
SEMA4D-222ENST00000540183 COL11A2P13942 1736 aaPredicted RBP19.26■□□□□ 0.67
SEMA4D-222ENST00000540183 TIAM2Q8IVF5 1701 aa19.26■□□□□ 0.67
SEMA4D-222ENST00000540183 U2SURPO15042 1029 aaKnown RBP19.26■□□□□ 0.67
SEMA4D-222ENST00000540183 RASSF7Q02833 373 aa19.26■□□□□ 0.67
SEMA4D-222ENST00000540183 IFFO2Q5TF58 517 aa19.25■□□□□ 0.67
SEMA4D-222ENST00000540183 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
SEMA4D-222ENST00000540183 SERPINB2P05120 415 aa19.24■□□□□ 0.67
SEMA4D-222ENST00000540183 VSIG10Q8N0Z9 540 aa19.24■□□□□ 0.67
SEMA4D-222ENST00000540183 PRELPP51888 382 aa19.23■□□□□ 0.67
SEMA4D-222ENST00000540183 BICDL1Q6ZP65 573 aa19.23■□□□□ 0.67
SEMA4D-222ENST00000540183 ZNF496Q96IT1 587 aaPredicted RBP19.23■□□□□ 0.67
SEMA4D-222ENST00000540183 BCORQ6W2J9 1755 aa19.22■□□□□ 0.67
SEMA4D-222ENST00000540183 APLP1P51693 650 aa19.22■□□□□ 0.67
SEMA4D-222ENST00000540183 HTRA3P83110 453 aa19.22■□□□□ 0.67
SEMA4D-222ENST00000540183 TTC5Q8N0Z6 440 aa19.22■□□□□ 0.67
SEMA4D-222ENST00000540183 EIF5P55010 431 aaKnown RBP19.21■□□□□ 0.67
SEMA4D-222ENST00000540183 RRAGCQ9HB90 399 aa19.21■□□□□ 0.67
SEMA4D-222ENST00000540183 DICER1Q9UPY3 1922 aaKnown RBP19.21■□□□□ 0.67
SEMA4D-222ENST00000540183 NPC1L1Q9UHC9 1359 aa19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 HEG1Q9ULI3 1381 aa19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 GNAT3A8MTJ3 354 aa19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 KCNQ3O43525 872 aa19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 C2CD5Q86YS7 1000 aa19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 CCDC24Q8N4L8 307 aa19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 DNAJC5GQ8N7S2 189 aa19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 RBM46Q8TBY0 533 aaKnown RBP19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 PHACTR3Q96KR7 559 aa19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
SEMA4D-222ENST00000540183 STARD3NLO95772 234 aa19.19■□□□□ 0.66
SEMA4D-222ENST00000540183 TEFQ10587 303 aa19.19■□□□□ 0.66
SEMA4D-222ENST00000540183 TBC1D9BQ66K14 1250 aa19.19■□□□□ 0.66
SEMA4D-222ENST00000540183 ZNF790Q6PG37 636 aa19.19■□□□□ 0.66
SEMA4D-222ENST00000540183 TBC1D2BQ9UPU7 963 aa19.19■□□□□ 0.66
SEMA4D-222ENST00000540183 FER1L6Q2WGJ9 1857 aa19.19■□□□□ 0.66
SEMA4D-222ENST00000540183 C16orf71Q8IYS4 520 aaPredicted RBP19.18■□□□□ 0.66
SEMA4D-222ENST00000540183 GAS2L2Q8NHY3 880 aa19.18■□□□□ 0.66
SEMA4D-222ENST00000540183 KDM2BQ8NHM5 1336 aa19.18■□□□□ 0.66
SEMA4D-222ENST00000540183 SLX4Q8IY92 1834 aa19.18■□□□□ 0.66
SEMA4D-222ENST00000540183 A1BGP04217 495 aa19.17■□□□□ 0.66
SEMA4D-222ENST00000540183 TTLL6Q8N841 843 aa19.17■□□□□ 0.66
SEMA4D-222ENST00000540183 PRKAR2BP31323 418 aa19.16■□□□□ 0.66
SEMA4D-222ENST00000540183 CEMIPQ8WUJ3 1361 aa19.16■□□□□ 0.66
SEMA4D-222ENST00000540183 DLG5Q8TDM6 1919 aa19.15■□□□□ 0.66
SEMA4D-222ENST00000540183 ARFGEF2Q9Y6D5 1785 aa19.15■□□□□ 0.66
SEMA4D-222ENST00000540183 A0A087WZG4 1122 aa19.15■□□□□ 0.66
SEMA4D-222ENST00000540183 H0YIN7 160 aa19.15■□□□□ 0.66
SEMA4D-222ENST00000540183 NFKBIEO00221 500 aa19.15■□□□□ 0.66
SEMA4D-222ENST00000540183 PIP4K2AP48426 406 aaPredicted RBP19.15■□□□□ 0.66
SEMA4D-222ENST00000540183 RSPH6AQ9H0K4 717 aa19.15■□□□□ 0.66
SEMA4D-222ENST00000540183 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
SEMA4D-222ENST00000540183 PRAMEF22A3QJZ6 481 aa19.14■□□□□ 0.65
SEMA4D-222ENST00000540183 LMNB1P20700 586 aa19.14■□□□□ 0.65
SEMA4D-222ENST00000540183 PRR5LQ6MZQ0 368 aa19.14■□□□□ 0.65
SEMA4D-222ENST00000540183 ZNF622Q969S3 477 aaKnown RBP eCLIP19.13■□□□□ 0.65
SEMA4D-222ENST00000540183 FMNL2Q96PY5 1086 aa19.13■□□□□ 0.65
SEMA4D-222ENST00000540183 BTBD11A6QL63 1104 aa19.12■□□□□ 0.65
SEMA4D-222ENST00000540183 CAMTA2O94983 1202 aa19.12■□□□□ 0.65
SEMA4D-222ENST00000540183 IL6STP40189 918 aaPredicted RBP19.12■□□□□ 0.65
SEMA4D-222ENST00000540183 FSTL1Q12841 308 aa19.12■□□□□ 0.65
SEMA4D-222ENST00000540183 TEX13AQ9BXU3 409 aaPredicted RBP19.12■□□□□ 0.65
SEMA4D-222ENST00000540183 C21orf2O43822 256 aa19.11■□□□□ 0.65
SEMA4D-222ENST00000540183 USP16Q9Y5T5 823 aa19.11■□□□□ 0.65
SEMA4D-222ENST00000540183 PCNTO95613 3336 aa19.1■□□□□ 0.65
SEMA4D-222ENST00000540183 GLTPD2A6NH11 291 aa19.1■□□□□ 0.65
SEMA4D-222ENST00000540183 MCM10Q7L590 875 aa19.1■□□□□ 0.65
SEMA4D-222ENST00000540183 BRIP1Q9BX63 1249 aa19.1■□□□□ 0.65
SEMA4D-222ENST00000540183 ZC3H4Q9UPT8 1303 aaKnown RBP19.09■□□□□ 0.65
SEMA4D-222ENST00000540183 DCTN1Q14203 1278 aa19.09■□□□□ 0.65
SEMA4D-222ENST00000540183 CFAP53Q96M91 514 aa19.09■□□□□ 0.65
SEMA4D-222ENST00000540183 U2AF1L5P0DN76 240 aaPredicted RBP19.08■□□□□ 0.64
SEMA4D-222ENST00000540183 PPP2R1AP30153 589 aa19.08■□□□□ 0.64
SEMA4D-222ENST00000540183 U2AF1Q01081 240 aaKnown RBP eCLIP19.08■□□□□ 0.64
SEMA4D-222ENST00000540183 DZIP3Q86Y13 1208 aaKnown RBP19.08■□□□□ 0.64
SEMA4D-222ENST00000540183 KLRG1Q96E93 195 aa19.08■□□□□ 0.64
SEMA4D-222ENST00000540183 LAMB4A4D0S4 1761 aa19.08■□□□□ 0.64
SEMA4D-222ENST00000540183 POTECB2RU33 542 aa19.07■□□□□ 0.64
SEMA4D-222ENST00000540183 PDE6BP35913 854 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms