RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 N4BP2Q86UW6 1770 aaPredicted RBP10.75□□□□□ -0.69
NPIPB4-212ENST00000540103 UBR2Q8IWV8 1755 aa10.75□□□□□ -0.69
NPIPB4-212ENST00000540103 GNAT3A8MTJ3 354 aa10.74□□□□□ -0.69
NPIPB4-212ENST00000540103 POLRMTO00411 1230 aaKnown RBP10.74□□□□□ -0.69
NPIPB4-212ENST00000540103 DPEP1P16444 411 aa10.74□□□□□ -0.69
NPIPB4-212ENST00000540103 GAS2L2Q8NHY3 880 aa10.74□□□□□ -0.69
NPIPB4-212ENST00000540103 ZNF496Q96IT1 587 aaPredicted RBP10.74□□□□□ -0.69
NPIPB4-212ENST00000540103 ZBTB1Q9Y2K1 713 aa10.74□□□□□ -0.69
NPIPB4-212ENST00000540103 BRCA1P38398 1863 aaKnown RBP10.74□□□□□ -0.69
NPIPB4-212ENST00000540103 KCNQ3O43525 872 aa10.73□□□□□ -0.69
NPIPB4-212ENST00000540103 PRKAR2BP31323 418 aa10.73□□□□□ -0.69
NPIPB4-212ENST00000540103 EIF5P55010 431 aaKnown RBP10.73□□□□□ -0.69
NPIPB4-212ENST00000540103 USPL1Q5W0Q7 1092 aa10.73□□□□□ -0.69
NPIPB4-212ENST00000540103 ZNF790Q6PG37 636 aa10.73□□□□□ -0.69
NPIPB4-212ENST00000540103 NARFQ9UHQ1 456 aa10.73□□□□□ -0.69
NPIPB4-212ENST00000540103 PARP3Q9Y6F1 533 aa10.73□□□□□ -0.69
NPIPB4-212ENST00000540103 FCHSD2O94868 740 aa10.72□□□□□ -0.69
NPIPB4-212ENST00000540103 NFIXQ14938 502 aa10.72□□□□□ -0.69
NPIPB4-212ENST00000540103 CFAP53Q96M91 514 aa10.71□□□□□ -0.69
NPIPB4-212ENST00000540103 ATP10DQ9P241 1426 aa10.71□□□□□ -0.69
NPIPB4-212ENST00000540103 HEG1Q9ULI3 1381 aa10.71□□□□□ -0.69
NPIPB4-212ENST00000540103 AFDNP55196 1824 aaKnown RBP10.7□□□□□ -0.7
NPIPB4-212ENST00000540103 ZPR1O75312 459 aa10.7□□□□□ -0.7
NPIPB4-212ENST00000540103 U2AF1L5P0DN76 240 aaPredicted RBP10.7□□□□□ -0.7
NPIPB4-212ENST00000540103 U2AF1Q01081 240 aaKnown RBP eCLIP10.7□□□□□ -0.74e-9■■□□□ 12.5
NPIPB4-212ENST00000540103 TEX13AQ9BXU3 409 aaPredicted RBP10.7□□□□□ -0.7
NPIPB4-212ENST00000540103 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
NPIPB4-212ENST00000540103 BCS1LQ9Y276 419 aa10.7□□□□□ -0.7
NPIPB4-212ENST00000540103 NRXN2Q9P2S2 1712 aa10.7□□□□□ -0.7
NPIPB4-212ENST00000540103 COL15A1P39059 1388 aa10.69□□□□□ -0.7
NPIPB4-212ENST00000540103 STARD3NLO95772 234 aa10.69□□□□□ -0.7
NPIPB4-212ENST00000540103 A1BGP04217 495 aa10.69□□□□□ -0.7
NPIPB4-212ENST00000540103 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
NPIPB4-212ENST00000540103 CHRNA5P30532 468 aa10.69□□□□□ -0.7
NPIPB4-212ENST00000540103 TEFQ10587 303 aa10.69□□□□□ -0.7
NPIPB4-212ENST00000540103 PLEKHF1Q96S99 279 aa10.69□□□□□ -0.7
NPIPB4-212ENST00000540103 USP16Q9Y5T5 823 aa10.69□□□□□ -0.7
NPIPB4-212ENST00000540103 ARFGEF1Q9Y6D6 1849 aa10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 PRAMEF22A3QJZ6 481 aa10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 HTATSF1O43719 755 aaKnown RBP10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 GIGYF1O75420 1035 aaPredicted RBP10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 SERPINB2P05120 415 aa10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 IL6STP40189 918 aaPredicted RBP10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 DCTN1Q14203 1278 aa10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 MCM10Q7L590 875 aa10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 TTC5Q8N0Z6 440 aa10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 FMNL2Q96PY5 1086 aa10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 PIM2Q9P1W9 311 aa10.68□□□□□ -0.7
NPIPB4-212ENST00000540103 BTBD11A6QL63 1104 aa10.67□□□□□ -0.7
NPIPB4-212ENST00000540103 KIF3CO14782 793 aa10.67□□□□□ -0.7
NPIPB4-212ENST00000540103 ARHGAP27Q6ZUM4 889 aa10.67□□□□□ -0.7
NPIPB4-212ENST00000540103 CAMTA2O94983 1202 aa10.66□□□□□ -0.7
NPIPB4-212ENST00000540103 TBC1D9BQ66K14 1250 aa10.66□□□□□ -0.7
NPIPB4-212ENST00000540103 TBC1D2BQ9UPU7 963 aa10.66□□□□□ -0.7
NPIPB4-212ENST00000540103 SBF1O95248 1867 aa10.66□□□□□ -0.7
NPIPB4-212ENST00000540103 A0A087WZG4 1122 aa10.65□□□□□ -0.7
NPIPB4-212ENST00000540103 NBPF26B4DH59 902 aa10.65□□□□□ -0.7
NPIPB4-212ENST00000540103 PRELPP51888 382 aa10.65□□□□□ -0.7
NPIPB4-212ENST00000540103 TAF7Q15545 349 aaPredicted RBP10.65□□□□□ -0.7
NPIPB4-212ENST00000540103 DALRD3Q5D0E6 543 aaKnown RBP10.65□□□□□ -0.7
NPIPB4-212ENST00000540103 NBPF10Q6P3W6 841 aaKnown RBP10.65□□□□□ -0.7
NPIPB4-212ENST00000540103 NBPF15Q8N660 670 aa10.65□□□□□ -0.7
NPIPB4-212ENST00000540103 GPBP1L1Q9HC44 474 aaPredicted RBP10.65□□□□□ -0.7
NPIPB4-212ENST00000540103 CARMIL3Q8ND23 1372 aa10.65□□□□□ -0.71
NPIPB4-212ENST00000540103 DLG5Q8TDM6 1919 aa10.64□□□□□ -0.71
NPIPB4-212ENST00000540103 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-212ENST00000540103 ZNF526Q8TF50 670 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-212ENST00000540103 ANKRD31Q8N7Z5 1873 aa10.64□□□□□ -0.71
NPIPB4-212ENST00000540103 SENP3-EIF4A1A0A087X0R7 540 aa10.63□□□□□ -0.71
NPIPB4-212ENST00000540103 PIP4K2AP48426 406 aaPredicted RBP10.63□□□□□ -0.71
NPIPB4-212ENST00000540103 C9orf131Q5VYM1 1079 aa10.63□□□□□ -0.71
NPIPB4-212ENST00000540103 DIEXFQ68CQ4 756 aaKnown RBP10.63□□□□□ -0.71
NPIPB4-212ENST00000540103 BICDL1Q6ZP65 573 aa10.63□□□□□ -0.71
NPIPB4-212ENST00000540103 RTF1Q92541 710 aaKnown RBP10.63□□□□□ -0.71
NPIPB4-212ENST00000540103 MIS18AQ9NYP9 233 aa10.63□□□□□ -0.71
NPIPB4-212ENST00000540103 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-212ENST00000540103 PRR5LQ6MZQ0 368 aa10.62□□□□□ -0.71
NPIPB4-212ENST00000540103 BRIP1Q9BX63 1249 aa10.62□□□□□ -0.71
NPIPB4-212ENST00000540103 DLEC1Q9Y238 1755 aa10.62□□□□□ -0.71
NPIPB4-212ENST00000540103 SCN7AQ01118 1682 aa10.61□□□□□ -0.71
NPIPB4-212ENST00000540103 EIF4A1P60842 406 aaKnown RBP10.61□□□□□ -0.71
NPIPB4-212ENST00000540103 NFE2L2Q16236 605 aa10.61□□□□□ -0.71
NPIPB4-212ENST00000540103 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
NPIPB4-212ENST00000540103 DZIP3Q86Y13 1208 aaKnown RBP10.61□□□□□ -0.71
NPIPB4-212ENST00000540103 C2CD5Q86YS7 1000 aa10.61□□□□□ -0.71
NPIPB4-212ENST00000540103 CCDC24Q8N4L8 307 aa10.61□□□□□ -0.71
NPIPB4-212ENST00000540103 TTLL6Q8N841 843 aa10.61□□□□□ -0.71
NPIPB4-212ENST00000540103 THUMPD2Q9BTF0 503 aaKnown RBP10.61□□□□□ -0.71
NPIPB4-212ENST00000540103 RGL2O15211 777 aa10.6□□□□□ -0.71
NPIPB4-212ENST00000540103 RALBP1Q15311 655 aa10.6□□□□□ -0.71
NPIPB4-212ENST00000540103 NMRK2Q9NPI5 230 aa10.6□□□□□ -0.71
NPIPB4-212ENST00000540103 BCORQ6W2J9 1755 aa10.6□□□□□ -0.71
NPIPB4-212ENST00000540103 CCDC88AQ3V6T2 1871 aa10.59□□□□□ -0.71
NPIPB4-212ENST00000540103 KLRG2A4D1S0 409 aaPredicted RBP10.59□□□□□ -0.71
NPIPB4-212ENST00000540103 H0YIN7 160 aa10.59□□□□□ -0.71
NPIPB4-212ENST00000540103 NFKBIEO00221 500 aa10.59□□□□□ -0.71
NPIPB4-212ENST00000540103 HSPA6P17066 643 aa10.59□□□□□ -0.71
NPIPB4-212ENST00000540103 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
NPIPB4-212ENST00000540103 PDZRN3Q9UPQ7 1066 aa10.59□□□□□ -0.71
NPIPB4-212ENST00000540103 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms