RNA–Protein interactions for RNA: ENST00000539953.1

SCNN1A-214, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 401 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-214ENST00000539953 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
SCNN1A-214ENST00000539953 USPL1Q5W0Q7 1092 aa16.82■□□□□ 0.28
SCNN1A-214ENST00000539953 PIM2Q9P1W9 311 aa16.81■□□□□ 0.28
SCNN1A-214ENST00000539953 COL15A1P39059 1388 aa16.8■□□□□ 0.28
SCNN1A-214ENST00000539953 CHRNA5P30532 468 aa16.8■□□□□ 0.28
SCNN1A-214ENST00000539953 BCL2L12Q9HB09 334 aa16.8■□□□□ 0.28
SCNN1A-214ENST00000539953 ZBTB1Q9Y2K1 713 aa16.8■□□□□ 0.28
SCNN1A-214ENST00000539953 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
SCNN1A-214ENST00000539953 NARFQ9UHQ1 456 aa16.79■□□□□ 0.28
SCNN1A-214ENST00000539953 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
SCNN1A-214ENST00000539953 ANKRD31Q8N7Z5 1873 aa16.78■□□□□ 0.28
SCNN1A-214ENST00000539953 ZPR1O75312 459 aa16.78■□□□□ 0.28
SCNN1A-214ENST00000539953 NFIXQ14938 502 aa16.78■□□□□ 0.28
SCNN1A-214ENST00000539953 DALRD3Q5D0E6 543 aaKnown RBP16.78■□□□□ 0.28
SCNN1A-214ENST00000539953 C9orf131Q5VYM1 1079 aa16.77■□□□□ 0.28
SCNN1A-214ENST00000539953 IL17REQ8NFR9 667 aa16.77■□□□□ 0.28
SCNN1A-214ENST00000539953 NMRK2Q9NPI5 230 aa16.77■□□□□ 0.28
SCNN1A-214ENST00000539953 SCN7AQ01118 1682 aa16.77■□□□□ 0.28
SCNN1A-214ENST00000539953 U2SURPO15042 1029 aaKnown RBP16.74■□□□□ 0.27
SCNN1A-214ENST00000539953 TOMM70O94826 608 aa16.74■□□□□ 0.27
SCNN1A-214ENST00000539953 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
SCNN1A-214ENST00000539953 EIF5P55010 431 aaKnown RBP16.74■□□□□ 0.27
SCNN1A-214ENST00000539953 CNGB1Q14028 1251 aaPredicted RBP16.74■□□□□ 0.27
SCNN1A-214ENST00000539953 ZNF496Q96IT1 587 aaPredicted RBP16.74■□□□□ 0.27
SCNN1A-214ENST00000539953 TNRC6CQ9HCJ0 1690 aaKnown RBP16.74■□□□□ 0.27
SCNN1A-214ENST00000539953 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
SCNN1A-214ENST00000539953 COL11A2P13942 1736 aaPredicted RBP16.73■□□□□ 0.27
SCNN1A-214ENST00000539953 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
SCNN1A-214ENST00000539953 SERPINB2P05120 415 aa16.73■□□□□ 0.27
SCNN1A-214ENST00000539953 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
SCNN1A-214ENST00000539953 HEG1Q9ULI3 1381 aa16.73■□□□□ 0.27
SCNN1A-214ENST00000539953 WDR90Q96KV7 1748 aa16.73■□□□□ 0.27
SCNN1A-214ENST00000539953 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
SCNN1A-214ENST00000539953 ZNF790Q6PG37 636 aa16.72■□□□□ 0.27
SCNN1A-214ENST00000539953 TTC5Q8N0Z6 440 aa16.72■□□□□ 0.27
SCNN1A-214ENST00000539953 GAS2L2Q8NHY3 880 aa16.72■□□□□ 0.27
SCNN1A-214ENST00000539953 PHACTR3Q96KR7 559 aa16.72■□□□□ 0.27
SCNN1A-214ENST00000539953 TIAM2Q8IVF5 1701 aa16.71■□□□□ 0.27
SCNN1A-214ENST00000539953 PRELPP51888 382 aa16.71■□□□□ 0.27
SCNN1A-214ENST00000539953 RNF181Q9P0P0 153 aa16.71■□□□□ 0.27
SCNN1A-214ENST00000539953 STARD3NLO95772 234 aa16.7■□□□□ 0.26
SCNN1A-214ENST00000539953 TEFQ10587 303 aa16.7■□□□□ 0.26
SCNN1A-214ENST00000539953 RSPH6AQ9H0K4 717 aa16.7■□□□□ 0.26
SCNN1A-214ENST00000539953 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
SCNN1A-214ENST00000539953 FER1L6Q2WGJ9 1857 aa16.69■□□□□ 0.26
SCNN1A-214ENST00000539953 DICER1Q9UPY3 1922 aaKnown RBP16.69■□□□□ 0.26
SCNN1A-214ENST00000539953 KCNQ3O43525 872 aa16.69■□□□□ 0.26
SCNN1A-214ENST00000539953 APLP1P51693 650 aa16.69■□□□□ 0.26
SCNN1A-214ENST00000539953 RASSF7Q02833 373 aa16.69■□□□□ 0.26
SCNN1A-214ENST00000539953 DNAJC5GQ8N7S2 189 aa16.69■□□□□ 0.26
SCNN1A-214ENST00000539953 A0A087WZG4 1122 aa16.68■□□□□ 0.26
SCNN1A-214ENST00000539953 PRKAR2BP31323 418 aa16.68■□□□□ 0.26
SCNN1A-214ENST00000539953 TBC1D9BQ66K14 1250 aa16.68■□□□□ 0.26
SCNN1A-214ENST00000539953 BICDL1Q6ZP65 573 aa16.68■□□□□ 0.26
SCNN1A-214ENST00000539953 RBM46Q8TBY0 533 aaKnown RBP16.68■□□□□ 0.26
SCNN1A-214ENST00000539953 A1BGP04217 495 aa16.67■□□□□ 0.26
SCNN1A-214ENST00000539953 IFFO2Q5TF58 517 aa16.67■□□□□ 0.26
SCNN1A-214ENST00000539953 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
SCNN1A-214ENST00000539953 TEX13AQ9BXU3 409 aaPredicted RBP16.67■□□□□ 0.26
SCNN1A-214ENST00000539953 TBC1D2BQ9UPU7 963 aa16.67■□□□□ 0.26
SCNN1A-214ENST00000539953 KDM2BQ8NHM5 1336 aa16.67■□□□□ 0.26
SCNN1A-214ENST00000539953 ARFGEF2Q9Y6D5 1785 aa16.66■□□□□ 0.26
SCNN1A-214ENST00000539953 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
SCNN1A-214ENST00000539953 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
SCNN1A-214ENST00000539953 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
SCNN1A-214ENST00000539953 FMNL2Q96PY5 1086 aa16.66■□□□□ 0.26
SCNN1A-214ENST00000539953 SLX4Q8IY92 1834 aa16.66■□□□□ 0.26
SCNN1A-214ENST00000539953 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
SCNN1A-214ENST00000539953 BTBD11A6QL63 1104 aa16.64■□□□□ 0.25
SCNN1A-214ENST00000539953 H0YIN7 160 aa16.64■□□□□ 0.25
SCNN1A-214ENST00000539953 NFKBIEO00221 500 aa16.64■□□□□ 0.25
SCNN1A-214ENST00000539953 CAMTA2O94983 1202 aa16.64■□□□□ 0.25
SCNN1A-214ENST00000539953 LMNB1P20700 586 aa16.64■□□□□ 0.25
SCNN1A-214ENST00000539953 PPP2R1AP30153 589 aa16.64■□□□□ 0.25
SCNN1A-214ENST00000539953 PRR5LQ6MZQ0 368 aa16.64■□□□□ 0.25
SCNN1A-214ENST00000539953 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.25
SCNN1A-214ENST00000539953 ZC3H4Q9UPT8 1303 aaKnown RBP16.64■□□□□ 0.25
SCNN1A-214ENST00000539953 PRAMEF22A3QJZ6 481 aa16.63■□□□□ 0.25
SCNN1A-214ENST00000539953 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
SCNN1A-214ENST00000539953 BRIP1Q9BX63 1249 aa16.63■□□□□ 0.25
SCNN1A-214ENST00000539953 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
SCNN1A-214ENST00000539953 USP16Q9Y5T5 823 aa16.63■□□□□ 0.25
SCNN1A-214ENST00000539953 FSTL1Q12841 308 aa16.62■□□□□ 0.25
SCNN1A-214ENST00000539953 MCM10Q7L590 875 aa16.62■□□□□ 0.25
SCNN1A-214ENST00000539953 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
SCNN1A-214ENST00000539953 HTRA3P83110 453 aa16.61■□□□□ 0.25
SCNN1A-214ENST00000539953 C16orf71Q8IYS4 520 aaPredicted RBP16.61■□□□□ 0.25
SCNN1A-214ENST00000539953 LAMB4A4D0S4 1761 aa16.61■□□□□ 0.25
SCNN1A-214ENST00000539953 KDM3BQ7LBC6 1761 aa16.6■□□□□ 0.25
SCNN1A-214ENST00000539953 GLTPD2A6NH11 291 aa16.6■□□□□ 0.25
SCNN1A-214ENST00000539953 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
SCNN1A-214ENST00000539953 PDE6BP35913 854 aa16.6■□□□□ 0.25
SCNN1A-214ENST00000539953 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
SCNN1A-214ENST00000539953 ZNF622Q969S3 477 aaKnown RBP eCLIP16.6■□□□□ 0.25
SCNN1A-214ENST00000539953 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
SCNN1A-214ENST00000539953 DCTN1Q14203 1278 aa16.59■□□□□ 0.25
SCNN1A-214ENST00000539953 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
SCNN1A-214ENST00000539953 SETDB2Q96T68 719 aa16.59■□□□□ 0.25
SCNN1A-214ENST00000539953 PDZRN3Q9UPQ7 1066 aa16.59■□□□□ 0.25
SCNN1A-214ENST00000539953 POTECB2RU33 542 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms