RNA–Protein interactions for RNA: ENST00000539893.5

VTCN1-207, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

TSL 2 BASIC

Gene VTCN1, Length 2,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-207ENST00000539893 C19orf44Q9H6X5 657 aa8.52□□□□□ -1.04
VTCN1-207ENST00000539893 MRC1P22897 1456 aa8.52□□□□□ -1.05
VTCN1-207ENST00000539893 GTPBP6O43824 516 aaPredicted RBP8.52□□□□□ -1.05
VTCN1-207ENST00000539893 CD2BP2O95400 341 aaKnown RBP8.52□□□□□ -1.05
VTCN1-207ENST00000539893 PDE1AP54750 535 aa8.52□□□□□ -1.05
VTCN1-207ENST00000539893 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.05
VTCN1-207ENST00000539893 PHAXQ9H814 394 aaKnown RBP8.52□□□□□ -1.05
VTCN1-207ENST00000539893 CIZ1Q9ULV3 898 aaPredicted RBP8.52□□□□□ -1.05
VTCN1-207ENST00000539893 LAMB4A4D0S4 1761 aa8.52□□□□□ -1.05
VTCN1-207ENST00000539893 KCNQ3O43525 872 aa8.52□□□□□ -1.05
VTCN1-207ENST00000539893 XPCQ01831 940 aaPredicted RBP8.52□□□□□ -1.05
VTCN1-207ENST00000539893 CHMP4AQ9BY43 222 aa8.52□□□□□ -1.05
VTCN1-207ENST00000539893 AXIN2Q9Y2T1 843 aa8.52□□□□□ -1.05
VTCN1-207ENST00000539893 ADCY9O60503 1353 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 POLA2Q14181 598 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 SSH3Q8TE77 659 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 STAP2Q9UGK3 403 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 LRRFIP2Q9Y608 721 aaKnown RBP8.51□□□□□ -1.05
VTCN1-207ENST00000539893 ERBB3P21860 1342 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 AOX1Q06278 1338 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 GLI3P10071 1580 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 K7ELQ4 463 aaPredicted RBP8.51□□□□□ -1.05
VTCN1-207ENST00000539893 MCM4P33991 863 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 LRRCC1Q9C099 1032 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 SLC24A3Q9HC58 644 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 EXOC6BQ9Y2D4 811 aa8.51□□□□□ -1.05
VTCN1-207ENST00000539893 ABCA3Q99758 1704 aa8.5□□□□□ -1.05
VTCN1-207ENST00000539893 AFDNP55196 1824 aaKnown RBP8.5□□□□□ -1.05
VTCN1-207ENST00000539893 BTBD11A6QL63 1104 aa8.5□□□□□ -1.05
VTCN1-207ENST00000539893 RABEP1Q15276 862 aa8.5□□□□□ -1.05
VTCN1-207ENST00000539893 BEND3Q5T5X7 828 aa8.5□□□□□ -1.05
VTCN1-207ENST00000539893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.5□□□□□ -1.05
VTCN1-207ENST00000539893 RBM42Q9BTD8 480 aaKnown RBP8.5□□□□□ -1.05
VTCN1-207ENST00000539893 CHPF2Q9P2E5 772 aa8.5□□□□□ -1.05
VTCN1-207ENST00000539893 APBB1O00213 710 aa8.5□□□□□ -1.05
VTCN1-207ENST00000539893 UBTFL1P0CB47 393 aaPredicted RBP8.5□□□□□ -1.05
VTCN1-207ENST00000539893 TEFQ10587 303 aa8.5□□□□□ -1.05
VTCN1-207ENST00000539893 MPRIPQ6WCQ1 1025 aa8.5□□□□□ -1.05
VTCN1-207ENST00000539893 KCNV2Q8TDN2 545 aa8.5□□□□□ -1.05
VTCN1-207ENST00000539893 KDM6AO15550 1401 aaPredicted RBP8.49□□□□□ -1.05
VTCN1-207ENST00000539893 ZBTB7CA1YPR0 619 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 C1orf141Q5JVX7 400 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 DNAAF4Q8WXU2 420 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 SRCIN1Q9C0H9 1055 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 TMEM94Q12767 1356 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 TNS3Q68CZ2 1445 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 ARFGEF2Q9Y6D5 1785 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 MEGF6O75095 1541 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 GIGYF1O75420 1035 aaPredicted RBP8.49□□□□□ -1.05
VTCN1-207ENST00000539893 HSP90AB1P08238 724 aaKnown RBP8.49□□□□□ -1.05
VTCN1-207ENST00000539893 RAB3GAP1Q15042 981 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 CASC1Q6TDU7 716 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 SHANK3Q9BYB0 1731 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 STRCQ7RTU9 1775 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 UBR2Q8IWV8 1755 aa8.49□□□□□ -1.05
VTCN1-207ENST00000539893 DCAF8L1A6NGE4 600 aa8.48□□□□□ -1.05
VTCN1-207ENST00000539893 RAB11FIP3O75154 756 aa8.48□□□□□ -1.05
VTCN1-207ENST00000539893 EIF2S2P20042 333 aaKnown RBP8.48□□□□□ -1.05
VTCN1-207ENST00000539893 MX1P20591 662 aa8.48□□□□□ -1.05
VTCN1-207ENST00000539893 ERC2O15083 957 aa8.48□□□□□ -1.05
VTCN1-207ENST00000539893 REC8O95072 547 aa8.48□□□□□ -1.05
VTCN1-207ENST00000539893 IL17RAQ96F46 866 aa8.48□□□□□ -1.05
VTCN1-207ENST00000539893 DBF4Q9UBU7 674 aaPredicted RBP8.48□□□□□ -1.05
VTCN1-207ENST00000539893 PAPPAQ13219 1627 aa8.48□□□□□ -1.05
VTCN1-207ENST00000539893 PI4KAP2A4QPH2 592 aa8.47□□□□□ -1.05
VTCN1-207ENST00000539893 MTX1Q13505 466 aa8.47□□□□□ -1.05
VTCN1-207ENST00000539893 PI4KAP1Q8N8J0 262 aa8.47□□□□□ -1.05
VTCN1-207ENST00000539893 CLEC17AQ6ZS10 378 aa8.47□□□□□ -1.05
VTCN1-207ENST00000539893 PPP1R42Q7Z4L9 355 aa8.47□□□□□ -1.05
VTCN1-207ENST00000539893 CPDO75976 1380 aa8.46□□□□□ -1.05
VTCN1-207ENST00000539893 USP42Q9H9J4 1324 aaKnown RBP8.46□□□□□ -1.05
VTCN1-207ENST00000539893 ALDH1L1O75891 902 aa8.46□□□□□ -1.05
VTCN1-207ENST00000539893 NBPF7P0C2Y1 421 aaPredicted RBP8.46□□□□□ -1.05
VTCN1-207ENST00000539893 TNPO1Q92973 898 aaKnown RBP8.46□□□□□ -1.05
VTCN1-207ENST00000539893 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.05
VTCN1-207ENST00000539893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.46□□□□□ -1.05
VTCN1-207ENST00000539893 NUP188Q5SRE5 1749 aa8.46□□□□□ -1.05
VTCN1-207ENST00000539893 UTYO14607 1347 aa8.46□□□□□ -1.06
VTCN1-207ENST00000539893 DDX11L8A8MPP1 907 aa8.46□□□□□ -1.06
VTCN1-207ENST00000539893 PROSER3Q2NL68 480 aa8.46□□□□□ -1.06
VTCN1-207ENST00000539893 NPHP3Q7Z494 1330 aa8.46□□□□□ -1.06
VTCN1-207ENST00000539893 ANXA1P04083 346 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 ATF3P18847 181 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 CHMLP26374 656 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 TSHZ3Q63HK5 1081 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 GPBP1L1Q9HC44 474 aaPredicted RBP8.45□□□□□ -1.06
VTCN1-207ENST00000539893 PRAMEF22A3QJZ6 481 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 EPB41L2O43491 1005 aaKnown RBP8.45□□□□□ -1.06
VTCN1-207ENST00000539893 PDIA6Q15084 440 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 KSR2Q6VAB6 950 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 HS6ST3Q8IZP7 471 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 PI4K2BQ8TCG2 481 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 RHPN1Q8TCX5 695 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 HYPKQ9NX55 129 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 PHKG2P15735 406 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
VTCN1-207ENST00000539893 KIF1BPQ96EK5 621 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 SLC52A2Q9HAB3 445 aa8.45□□□□□ -1.06
VTCN1-207ENST00000539893 DDX21Q9NR30 783 aaKnown RBP eCLIP8.45□□□□□ -1.06
VTCN1-207ENST00000539893 SPATA31A3Q5VYP0 1347 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms