RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 RBM46Q8TBY0 533 aaKnown RBP20.36■□□□□ 0.85
USB1-203ENST00000539737 SOS1Q07889 1333 aaPredicted RBP20.35■□□□□ 0.85
USB1-203ENST00000539737 CAPN15O75808 1086 aa20.35■□□□□ 0.85
USB1-203ENST00000539737 NFIXQ14938 502 aa20.35■□□□□ 0.85
USB1-203ENST00000539737 COL13A1Q5TAT6 717 aaPredicted RBP20.35■□□□□ 0.85
USB1-203ENST00000539737 BCL2L12Q9HB09 334 aa20.35■□□□□ 0.85
USB1-203ENST00000539737 ZBTB1Q9Y2K1 713 aa20.35■□□□□ 0.85
USB1-203ENST00000539737 CCDC24Q8N4L8 307 aa20.34■□□□□ 0.85
USB1-203ENST00000539737 PLEKHG2Q9H7P9 1386 aa20.34■□□□□ 0.85
USB1-203ENST00000539737 KLRG1Q96E93 195 aa20.33■□□□□ 0.85
USB1-203ENST00000539737 SLC52A2Q9HAB3 445 aa20.33■□□□□ 0.85
USB1-203ENST00000539737 CYP19A1P11511 503 aaPredicted RBP20.32■□□□□ 0.84
USB1-203ENST00000539737 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
USB1-203ENST00000539737 BICDL1Q6ZP65 573 aa20.32■□□□□ 0.84
USB1-203ENST00000539737 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
USB1-203ENST00000539737 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
USB1-203ENST00000539737 ZPR1O75312 459 aa20.31■□□□□ 0.84
USB1-203ENST00000539737 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
USB1-203ENST00000539737 TNRC6CQ9HCJ0 1690 aaKnown RBP20.31■□□□□ 0.84
USB1-203ENST00000539737 COL15A1P39059 1388 aa20.31■□□□□ 0.84
USB1-203ENST00000539737 KDM2BQ8NHM5 1336 aa20.3■□□□□ 0.84
USB1-203ENST00000539737 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
USB1-203ENST00000539737 TIAM2Q8IVF5 1701 aa20.3■□□□□ 0.84
USB1-203ENST00000539737 NRXN2Q9P2S2 1712 aa20.3■□□□□ 0.84
USB1-203ENST00000539737 MTHFSDQ2M296 383 aaKnown RBP20.29■□□□□ 0.84
USB1-203ENST00000539737 AKAP4Q5JQC9 854 aa20.29■□□□□ 0.84
USB1-203ENST00000539737 MRC1P22897 1456 aa20.29■□□□□ 0.84
USB1-203ENST00000539737 DLEC1Q9Y238 1755 aa20.29■□□□□ 0.84
USB1-203ENST00000539737 NARFQ9UHQ1 456 aa20.28■□□□□ 0.84
USB1-203ENST00000539737 ANKRD31Q8N7Z5 1873 aa20.27■□□□□ 0.84
USB1-203ENST00000539737 SERPINB2P05120 415 aa20.27■□□□□ 0.84
USB1-203ENST00000539737 C2CD5Q86YS7 1000 aa20.27■□□□□ 0.84
USB1-203ENST00000539737 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.83
USB1-203ENST00000539737 NFKBIEO00221 500 aa20.26■□□□□ 0.83
USB1-203ENST00000539737 ZEB1P37275 1124 aaPredicted RBP20.26■□□□□ 0.83
USB1-203ENST00000539737 FSTL1Q12841 308 aa20.26■□□□□ 0.83
USB1-203ENST00000539737 AMER1Q5JTC6 1135 aaPredicted RBP20.26■□□□□ 0.83
USB1-203ENST00000539737 COL11A2P13942 1736 aaPredicted RBP20.26■□□□□ 0.83
USB1-203ENST00000539737 JMYQ8N9B5 988 aa20.25■□□□□ 0.83
USB1-203ENST00000539737 KNSTRNQ9Y448 316 aa20.25■□□□□ 0.83
USB1-203ENST00000539737 UBR2Q8IWV8 1755 aa20.24■□□□□ 0.83
USB1-203ENST00000539737 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
USB1-203ENST00000539737 CC2D1BQ5T0F9 858 aaKnown RBP20.23■□□□□ 0.83
USB1-203ENST00000539737 TBC1D9BQ66K14 1250 aa20.23■□□□□ 0.83
USB1-203ENST00000539737 POTECB2RU33 542 aa20.22■□□□□ 0.83
USB1-203ENST00000539737 SMC1BQ8NDV3 1235 aa20.22■□□□□ 0.83
USB1-203ENST00000539737 CACNA1SQ13698 1873 aa20.22■□□□□ 0.83
USB1-203ENST00000539737 LMNB1P20700 586 aa20.21■□□□□ 0.83
USB1-203ENST00000539737 PIP4K2AP48426 406 aaPredicted RBP20.21■□□□□ 0.83
USB1-203ENST00000539737 TTLL6Q8N841 843 aa20.21■□□□□ 0.83
USB1-203ENST00000539737 TBC1D2BQ9UPU7 963 aa20.21■□□□□ 0.83
USB1-203ENST00000539737 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.82
USB1-203ENST00000539737 GLTPD2A6NH11 291 aa20.19■□□□□ 0.82
USB1-203ENST00000539737 C21orf2O43822 256 aa20.19■□□□□ 0.82
USB1-203ENST00000539737 POTEIP0CG38 1075 aa20.19■□□□□ 0.82
USB1-203ENST00000539737 POTEJP0CG39 1038 aa20.19■□□□□ 0.82
USB1-203ENST00000539737 ZNF496Q96IT1 587 aaPredicted RBP20.19■□□□□ 0.82
USB1-203ENST00000539737 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
USB1-203ENST00000539737 H0YIN7 160 aa20.18■□□□□ 0.82
USB1-203ENST00000539737 KCNQ3O43525 872 aa20.18■□□□□ 0.82
USB1-203ENST00000539737 EIF5P55010 431 aaKnown RBP20.18■□□□□ 0.82
USB1-203ENST00000539737 HSPA1AP0DMV8 641 aaKnown RBP20.17■□□□□ 0.82
USB1-203ENST00000539737 HSPA1BP0DMV9 641 aaKnown RBP20.17■□□□□ 0.82
USB1-203ENST00000539737 PRR5LQ6MZQ0 368 aa20.17■□□□□ 0.82
USB1-203ENST00000539737 TNS4Q8IZW8 715 aa20.17■□□□□ 0.82
USB1-203ENST00000539737 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
USB1-203ENST00000539737 DIAPH1O60610 1272 aaKnown RBP20.16■□□□□ 0.82
USB1-203ENST00000539737 A1BGP04217 495 aa20.16■□□□□ 0.82
USB1-203ENST00000539737 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
USB1-203ENST00000539737 IL17REQ8NFR9 667 aa20.16■□□□□ 0.82
USB1-203ENST00000539737 SLX4Q8IY92 1834 aa20.16■□□□□ 0.82
USB1-203ENST00000539737 SIPA1L3O60292 1781 aaPredicted RBP20.15■□□□□ 0.82
USB1-203ENST00000539737 FER1L6Q2WGJ9 1857 aa20.15■□□□□ 0.82
USB1-203ENST00000539737 PRAMEF22A3QJZ6 481 aa20.14■□□□□ 0.81
USB1-203ENST00000539737 U2SURPO15042 1029 aaKnown RBP20.14■□□□□ 0.81
USB1-203ENST00000539737 TTC5Q8N0Z6 440 aa20.14■□□□□ 0.81
USB1-203ENST00000539737 HEG1Q9ULI3 1381 aa20.13■□□□□ 0.81
USB1-203ENST00000539737 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
USB1-203ENST00000539737 DDNO94850 711 aaPredicted RBP20.12■□□□□ 0.81
USB1-203ENST00000539737 ERFEQ4G0M1 354 aa20.12■□□□□ 0.81
USB1-203ENST00000539737 MKRN1Q9UHC7 482 aaKnown RBP20.12■□□□□ 0.81
USB1-203ENST00000539737 ZC3H4Q9UPT8 1303 aaKnown RBP20.11■□□□□ 0.81
USB1-203ENST00000539737 PER1O15534 1290 aaPredicted RBP20.11■□□□□ 0.81
USB1-203ENST00000539737 ZNF790Q6PG37 636 aa20.11■□□□□ 0.81
USB1-203ENST00000539737 OLFM4Q6UX06 510 aa20.11■□□□□ 0.81
USB1-203ENST00000539737 DICER1Q9UPY3 1922 aaKnown RBP20.11■□□□□ 0.81
USB1-203ENST00000539737 STARD3NLO95772 234 aa20.1■□□□□ 0.81
USB1-203ENST00000539737 CAMTA2O94983 1202 aa20.09■□□□□ 0.81
USB1-203ENST00000539737 TEFQ10587 303 aa20.09■□□□□ 0.81
USB1-203ENST00000539737 PHACTR3Q96KR7 559 aa20.09■□□□□ 0.81
USB1-203ENST00000539737 BCORQ6W2J9 1755 aa20.08■□□□□ 0.81
USB1-203ENST00000539737 PRPF40BQ6NWY9 871 aaKnown RBP20.08■□□□□ 0.81
USB1-203ENST00000539737 BRIP1Q9BX63 1249 aa20.08■□□□□ 0.81
USB1-203ENST00000539737 A0A087WZG4 1122 aa20.07■□□□□ 0.8
USB1-203ENST00000539737 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
USB1-203ENST00000539737 USP16Q9Y5T5 823 aa20.07■□□□□ 0.8
USB1-203ENST00000539737 FAM177BA6PVY3 158 aa20.06■□□□□ 0.8
USB1-203ENST00000539737 PDE6BP35913 854 aa20.06■□□□□ 0.8
USB1-203ENST00000539737 SLC51AQ86UW1 340 aa20.06■□□□□ 0.8
USB1-203ENST00000539737 CNBD1Q8NA66 436 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms