RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PA2G4Q9UQ80 394 aaKnown RBP17.17■□□□□ 0.34
UBE3B-210ENST00000539599 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-210ENST00000539599 NUCB2P80303 420 aa17.16■□□□□ 0.34
UBE3B-210ENST00000539599 BTBD11A6QL63 1104 aa17.16■□□□□ 0.34
UBE3B-210ENST00000539599 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
UBE3B-210ENST00000539599 ZSCAN23Q3MJ62 389 aa17.16■□□□□ 0.34
UBE3B-210ENST00000539599 RHPN1Q8TCX5 695 aa17.16■□□□□ 0.34
UBE3B-210ENST00000539599 IP6K1Q92551 441 aa17.16■□□□□ 0.34
UBE3B-210ENST00000539599 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-210ENST00000539599 LTN1O94822 1766 aa17.16■□□□□ 0.34
UBE3B-210ENST00000539599 SSH3Q8TE77 659 aa17.15■□□□□ 0.34
UBE3B-210ENST00000539599 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
UBE3B-210ENST00000539599 PXDNQ92626 1479 aa17.15■□□□□ 0.34
UBE3B-210ENST00000539599 NASPP49321 788 aaPredicted RBP17.14■□□□□ 0.33
UBE3B-210ENST00000539599 TEFQ10587 303 aa17.14■□□□□ 0.33
UBE3B-210ENST00000539599 BEND3Q5T5X7 828 aa17.14■□□□□ 0.33
UBE3B-210ENST00000539599 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.33
UBE3B-210ENST00000539599 PI4K2BQ8TCG2 481 aa17.14■□□□□ 0.33
UBE3B-210ENST00000539599 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.33
UBE3B-210ENST00000539599 AXIN2Q9Y2T1 843 aa17.14■□□□□ 0.33
UBE3B-210ENST00000539599 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
UBE3B-210ENST00000539599 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
UBE3B-210ENST00000539599 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
UBE3B-210ENST00000539599 PIP4K2AP48426 406 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-210ENST00000539599 NAP1L5Q96NT1 182 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-210ENST00000539599 RBSNQ9H1K0 784 aa17.13■□□□□ 0.33
UBE3B-210ENST00000539599 TMEM63CQ9P1W3 806 aa17.13■□□□□ 0.33
UBE3B-210ENST00000539599 TUBGCP6Q96RT7 1819 aa17.13■□□□□ 0.33
UBE3B-210ENST00000539599 OS9Q13438 667 aaPredicted RBP17.12■□□□□ 0.33
UBE3B-210ENST00000539599 STAP2Q9UGK3 403 aa17.12■□□□□ 0.33
UBE3B-210ENST00000539599 ADCY9O60503 1353 aa17.12■□□□□ 0.33
UBE3B-210ENST00000539599 CEMIPQ8WUJ3 1361 aa17.12■□□□□ 0.33
UBE3B-210ENST00000539599 ESPNB1AK53 854 aa17.12■□□□□ 0.33
UBE3B-210ENST00000539599 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
UBE3B-210ENST00000539599 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
UBE3B-210ENST00000539599 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
UBE3B-210ENST00000539599 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
UBE3B-210ENST00000539599 TRIM44Q96DX7 344 aaPredicted RBP17.11■□□□□ 0.33
UBE3B-210ENST00000539599 SYCE3A1L190 88 aa17.11■□□□□ 0.33
UBE3B-210ENST00000539599 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
UBE3B-210ENST00000539599 MAP3K2Q9Y2U5 619 aa17.11■□□□□ 0.33
UBE3B-210ENST00000539599 SLC39A6Q13433 755 aa17.11■□□□□ 0.33
UBE3B-210ENST00000539599 POLA2Q14181 598 aa17.11■□□□□ 0.33
UBE3B-210ENST00000539599 RNF214Q8ND24 703 aa17.1■□□□□ 0.33
UBE3B-210ENST00000539599 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
UBE3B-210ENST00000539599 GCP02774 474 aa17.1■□□□□ 0.33
UBE3B-210ENST00000539599 ZC3H6P61129 1189 aaKnown RBP17.1■□□□□ 0.33
UBE3B-210ENST00000539599 KLHDC4Q8TBB5 520 aa17.1■□□□□ 0.33
UBE3B-210ENST00000539599 GADD45BO75293 160 aaPredicted RBP17.09■□□□□ 0.33
UBE3B-210ENST00000539599 CLCN1P35523 988 aa17.09■□□□□ 0.33
UBE3B-210ENST00000539599 MCCP23508 829 aa17.08■□□□□ 0.33
UBE3B-210ENST00000539599 NFAT5O94916 1531 aa17.08■□□□□ 0.33
UBE3B-210ENST00000539599 ANKRD24Q8TF21 1146 aa17.08■□□□□ 0.32
UBE3B-210ENST00000539599 SIL1Q9H173 461 aa17.08■□□□□ 0.32
UBE3B-210ENST00000539599 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
UBE3B-210ENST00000539599 LARGE1O95461 756 aa17.07■□□□□ 0.32
UBE3B-210ENST00000539599 ANKLE2Q86XL3 938 aa17.07■□□□□ 0.32
UBE3B-210ENST00000539599 C9orf78Q9NZ63 289 aaPredicted RBP17.07■□□□□ 0.32
UBE3B-210ENST00000539599 SNX14Q9Y5W7 946 aa17.07■□□□□ 0.32
UBE3B-210ENST00000539599 BRD1O95696 1058 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 PTH1RQ03431 593 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 KIF1BPQ96EK5 621 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 MYL6BP14649 208 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 HSPA4P34932 840 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 SGSM2O43147 1006 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 PTMSP20962 102 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 CUL4AQ13619 759 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 C1orf141Q5JVX7 400 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 MPNDQ8N594 471 aa17.06■□□□□ 0.32
UBE3B-210ENST00000539599 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
UBE3B-210ENST00000539599 GIGYF1O75420 1035 aaPredicted RBP17.05■□□□□ 0.32
UBE3B-210ENST00000539599 ADCK5Q3MIX3 580 aa17.05■□□□□ 0.32
UBE3B-210ENST00000539599 LSG1Q9H089 658 aaKnown RBP17.05■□□□□ 0.32
UBE3B-210ENST00000539599 CCDC8Q9H0W5 538 aaPredicted RBP17.05■□□□□ 0.32
UBE3B-210ENST00000539599 ZNF445P59923 1031 aa17.05■□□□□ 0.32
UBE3B-210ENST00000539599 PLEKHO1Q53GL0 409 aaPredicted RBP17.05■□□□□ 0.32
UBE3B-210ENST00000539599 AK2P54819 239 aa17.04■□□□□ 0.32
UBE3B-210ENST00000539599 SUCLG2Q96I99 432 aa17.04■□□□□ 0.32
UBE3B-210ENST00000539599 ISY1Q9ULR0 285 aaKnown RBP17.04■□□□□ 0.32
UBE3B-210ENST00000539599 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
UBE3B-210ENST00000539599 ARHGEF25Q86VW2 580 aa17.04■□□□□ 0.32
UBE3B-210ENST00000539599 KAZALD1Q96I82 304 aa17.04■□□□□ 0.32
UBE3B-210ENST00000539599 NDUFB9Q9Y6M9 179 aa17.03■□□□□ 0.32
UBE3B-210ENST00000539599 RAD50Q92878 1312 aa17.03■□□□□ 0.32
UBE3B-210ENST00000539599 RAB11FIP3O75154 756 aa17.03■□□□□ 0.32
UBE3B-210ENST00000539599 CHGBP05060 677 aa17.03■□□□□ 0.32
UBE3B-210ENST00000539599 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
UBE3B-210ENST00000539599 TCEANC2Q96MN5 208 aa17.03■□□□□ 0.32
UBE3B-210ENST00000539599 DBF4Q9UBU7 674 aaPredicted RBP17.03■□□□□ 0.32
UBE3B-210ENST00000539599 PRPF40BQ6NWY9 871 aaKnown RBP17.02■□□□□ 0.32
UBE3B-210ENST00000539599 AACSQ86V21 672 aa17.02■□□□□ 0.32
UBE3B-210ENST00000539599 CNTROBQ8N137 903 aa17.02■□□□□ 0.32
UBE3B-210ENST00000539599 CABLES1Q8TDN4 633 aa17.02■□□□□ 0.32
UBE3B-210ENST00000539599 EDC3Q96F86 508 aaKnown RBP17.02■□□□□ 0.32
UBE3B-210ENST00000539599 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.32
UBE3B-210ENST00000539599 BABAM1Q9NWV8 329 aa17.02■□□□□ 0.32
UBE3B-210ENST00000539599 CACNA1FO60840 1977 aa17.02■□□□□ 0.32
UBE3B-210ENST00000539599 TCHHQ07283 1943 aa17.02■□□□□ 0.32
UBE3B-210ENST00000539599 CASTP20810 708 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms