RNA–Protein interactions for RNA: ENST00000539436.5

TRPT1-207, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 1,726 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-207ENST00000539436 CHMP4AQ9BY43 222 aa24.4■■□□□ 1.5
TRPT1-207ENST00000539436 UBR2Q8IWV8 1755 aa24.4■■□□□ 1.5
TRPT1-207ENST00000539436 RXRBP28702 533 aa24.39■■□□□ 1.5
TRPT1-207ENST00000539436 PROSER3Q2NL68 480 aa24.39■■□□□ 1.5
TRPT1-207ENST00000539436 DBF4Q9UBU7 674 aaPredicted RBP24.39■■□□□ 1.5
TRPT1-207ENST00000539436 FLIIQ13045 1269 aa24.38■■□□□ 1.49
TRPT1-207ENST00000539436 POTEAQ6S8J7 498 aa24.38■■□□□ 1.49
TRPT1-207ENST00000539436 MS4A1P11836 297 aa24.38■■□□□ 1.49
TRPT1-207ENST00000539436 PIP4K2AP48426 406 aaPredicted RBP24.38■■□□□ 1.49
TRPT1-207ENST00000539436 KRT27Q7Z3Y8 459 aa24.38■■□□□ 1.49
TRPT1-207ENST00000539436 TMEM57Q8N5G2 664 aa24.38■■□□□ 1.49
TRPT1-207ENST00000539436 API5Q9BZZ5 524 aaKnown RBP24.38■■□□□ 1.49
TRPT1-207ENST00000539436 PDIA6Q15084 440 aa24.37■■□□□ 1.49
TRPT1-207ENST00000539436 SLC4A9Q96Q91 983 aa24.37■■□□□ 1.49
TRPT1-207ENST00000539436 PTPRCP08575 1304 aa24.37■■□□□ 1.49
TRPT1-207ENST00000539436 MYL6BP14649 208 aa24.35■■□□□ 1.49
TRPT1-207ENST00000539436 DNAJC10Q8IXB1 793 aa24.35■■□□□ 1.49
TRPT1-207ENST00000539436 F6X3S4 739 aa24.35■■□□□ 1.49
TRPT1-207ENST00000539436 FKBP5Q13451 457 aaPredicted RBP24.35■■□□□ 1.49
TRPT1-207ENST00000539436 DDX21Q9NR30 783 aaKnown RBP eCLIP24.35■■□□□ 1.49
TRPT1-207ENST00000539436 MVPQ14764 893 aaKnown RBP24.34■■□□□ 1.49
TRPT1-207ENST00000539436 ITPRIPQ8IWB1 547 aa24.34■■□□□ 1.49
TRPT1-207ENST00000539436 VSIG10Q8N0Z9 540 aa24.34■■□□□ 1.49
TRPT1-207ENST00000539436 PPP4R2Q9NY27 417 aa24.34■■□□□ 1.49
TRPT1-207ENST00000539436 RGS12O14924 1447 aa24.34■■□□□ 1.49
TRPT1-207ENST00000539436 A1BGP04217 495 aa24.33■■□□□ 1.49
TRPT1-207ENST00000539436 ABCC4O15439 1325 aa24.33■■□□□ 1.49
TRPT1-207ENST00000539436 BRWD3Q6RI45 1802 aa24.33■■□□□ 1.48
TRPT1-207ENST00000539436 HYPKQ9NX55 129 aa24.32■■□□□ 1.48
TRPT1-207ENST00000539436 PALLDQ8WX93 1383 aa24.32■■□□□ 1.48
TRPT1-207ENST00000539436 AIMP1Q12904 312 aaKnown RBP24.31■■□□□ 1.48
TRPT1-207ENST00000539436 SLC4A10Q6U841 1118 aa24.3■■□□□ 1.48
TRPT1-207ENST00000539436 SMARCC1Q92922 1105 aaPredicted RBP24.3■■□□□ 1.48
TRPT1-207ENST00000539436 TEX13AQ9BXU3 409 aaPredicted RBP24.3■■□□□ 1.48
TRPT1-207ENST00000539436 NBPF26B4DH59 902 aa24.3■■□□□ 1.48
TRPT1-207ENST00000539436 NBPF14Q5TI25 921 aa24.3■■□□□ 1.48
TRPT1-207ENST00000539436 B4GALNT3Q6L9W6 998 aa24.3■■□□□ 1.48
TRPT1-207ENST00000539436 NBPF10Q6P3W6 841 aaKnown RBP24.3■■□□□ 1.48
TRPT1-207ENST00000539436 FAM196AQ6ZSG2 479 aa24.3■■□□□ 1.48
TRPT1-207ENST00000539436 ILDR1Q86SU0 546 aaPredicted RBP24.3■■□□□ 1.48
TRPT1-207ENST00000539436 NBPF15Q8N660 670 aa24.3■■□□□ 1.48
TRPT1-207ENST00000539436 LOC102724428A0A0B4J2F2 783 aa24.29■■□□□ 1.48
TRPT1-207ENST00000539436 ATP6V1AP38606 617 aa24.29■■□□□ 1.48
TRPT1-207ENST00000539436 SIK1P57059 783 aa24.29■■□□□ 1.48
TRPT1-207ENST00000539436 LAMB4A4D0S4 1761 aa24.28■■□□□ 1.48
TRPT1-207ENST00000539436 LRP10Q7Z4F1 713 aa24.28■■□□□ 1.48
TRPT1-207ENST00000539436 NHSQ6T4R5 1651 aa24.28■■□□□ 1.48
TRPT1-207ENST00000539436 COPS6Q7L5N1 327 aa24.27■■□□□ 1.48
TRPT1-207ENST00000539436 XAGE3Q8WTP9 111 aa24.27■■□□□ 1.48
TRPT1-207ENST00000539436 PI4KAP2A4QPH2 592 aa24.27■■□□□ 1.48
TRPT1-207ENST00000539436 STARD3NLO95772 234 aa24.27■■□□□ 1.48
TRPT1-207ENST00000539436 CYP19A1P11511 503 aaPredicted RBP24.27■■□□□ 1.48
TRPT1-207ENST00000539436 PI4KAP1Q8N8J0 262 aa24.27■■□□□ 1.48
TRPT1-207ENST00000539436 DDX19BQ9UMR2 479 aa24.27■■□□□ 1.48
TRPT1-207ENST00000539436 INTS3Q68E01 1043 aaKnown RBP24.26■■□□□ 1.47
TRPT1-207ENST00000539436 ERBB4Q15303 1308 aa24.25■■□□□ 1.47
TRPT1-207ENST00000539436 KCNQ4P56696 695 aa24.25■■□□□ 1.47
TRPT1-207ENST00000539436 ITPK1Q13572 414 aa24.25■■□□□ 1.47
TRPT1-207ENST00000539436 BCL11BQ9C0K0 894 aaPredicted RBP24.25■■□□□ 1.47
TRPT1-207ENST00000539436 CACNA1FO60840 1977 aa24.24■■□□□ 1.47
TRPT1-207ENST00000539436 TRIM37O94972 964 aa24.24■■□□□ 1.47
TRPT1-207ENST00000539436 CCDC136Q96JN2 1154 aa24.24■■□□□ 1.47
TRPT1-207ENST00000539436 ADCY9O60503 1353 aa24.23■■□□□ 1.47
TRPT1-207ENST00000539436 BTAF1O14981 1849 aa24.23■■□□□ 1.47
TRPT1-207ENST00000539436 SBF2Q86WG5 1849 aa24.23■■□□□ 1.47
TRPT1-207ENST00000539436 MAP3K2Q9Y2U5 619 aa24.23■■□□□ 1.47
TRPT1-207ENST00000539436 TJP1Q07157 1748 aa24.22■■□□□ 1.47
TRPT1-207ENST00000539436 ZBTB7BO15156 539 aaPredicted RBP24.22■■□□□ 1.47
TRPT1-207ENST00000539436 KSR2Q6VAB6 950 aa24.22■■□□□ 1.47
TRPT1-207ENST00000539436 DNAAF4Q8WXU2 420 aa24.22■■□□□ 1.47
TRPT1-207ENST00000539436 ZNF330Q9Y3S2 320 aaPredicted RBP24.22■■□□□ 1.47
TRPT1-207ENST00000539436 DDX58O95786 925 aaKnown RBP24.21■■□□□ 1.47
TRPT1-207ENST00000539436 CCT4P50991 539 aaKnown RBP24.21■■□□□ 1.47
TRPT1-207ENST00000539436 RIC3Q7Z5B4 369 aa24.21■■□□□ 1.47
TRPT1-207ENST00000539436 ZBTB1Q9Y2K1 713 aa24.21■■□□□ 1.47
TRPT1-207ENST00000539436 TTLL7Q6ZT98 887 aa24.2■■□□□ 1.46
TRPT1-207ENST00000539436 ANKRD13DQ6ZTN6 518 aa24.19■■□□□ 1.46
TRPT1-207ENST00000539436 ZBTB40Q9NUA8 1239 aa24.19■■□□□ 1.46
TRPT1-207ENST00000539436 CRKLP46109 303 aaKnown RBP24.18■■□□□ 1.46
TRPT1-207ENST00000539436 INTS5Q6P9B9 1019 aaKnown RBP24.18■■□□□ 1.46
TRPT1-207ENST00000539436 BEND3Q5T5X7 828 aa24.17■■□□□ 1.46
TRPT1-207ENST00000539436 LINC00116Q8NCU8 138 aa24.17■■□□□ 1.46
TRPT1-207ENST00000539436 PCDHB15Q9Y5E8 787 aa24.17■■□□□ 1.46
TRPT1-207ENST00000539436 ARXQ96QS3 562 aa24.16■■□□□ 1.46
TRPT1-207ENST00000539436 SRCIN1Q9C0H9 1055 aa24.16■■□□□ 1.46
TRPT1-207ENST00000539436 C1orf115Q9H7X2 142 aa24.16■■□□□ 1.46
TRPT1-207ENST00000539436 CCDC87Q9NVE4 849 aa24.16■■□□□ 1.46
TRPT1-207ENST00000539436 CCNL1Q9UK58 526 aaPredicted RBP24.16■■□□□ 1.46
TRPT1-207ENST00000539436 MEIS3Q99687 375 aa24.15■■□□□ 1.46
TRPT1-207ENST00000539436 AAMPQ13685 434 aa24.15■■□□□ 1.46
TRPT1-207ENST00000539436 PLBD2Q8NHP8 589 aa24.14■■□□□ 1.45
TRPT1-207ENST00000539436 ZBTB3Q9H5J0 574 aa24.14■■□□□ 1.45
TRPT1-207ENST00000539436 PXDNLA1KZ92 1463 aa24.14■■□□□ 1.45
TRPT1-207ENST00000539436 CWF19L2Q2TBE0 894 aaKnown RBP24.13■■□□□ 1.45
TRPT1-207ENST00000539436 MYD88Q99836 296 aa24.13■■□□□ 1.45
TRPT1-207ENST00000539436 CHMP4BQ9H444 224 aaKnown RBP24.13■■□□□ 1.45
TRPT1-207ENST00000539436 METTL22Q9BUU2 404 aaPredicted RBP24.13■■□□□ 1.45
TRPT1-207ENST00000539436 IL6STP40189 918 aaPredicted RBP24.12■■□□□ 1.45
TRPT1-207ENST00000539436 CICQ96RK0 1608 aaPredicted RBP24.11■■□□□ 1.45
TRPT1-207ENST00000539436 ATP10DQ9P241 1426 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms