RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 DACH1Q9UI36 760 aa17.06■□□□□ 0.32
CACNB1-206ENST00000539338 SKIDA1Q1XH10 827 aa17.06■□□□□ 0.32
CACNB1-206ENST00000539338 C14orf93Q9H972 538 aaKnown RBP17.06■□□□□ 0.32
CACNB1-206ENST00000539338 CDR1P51861 262 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 TBC1D32Q96NH3 1257 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 FLIIQ13045 1269 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 IMMTQ16891 758 aaKnown RBP17.05■□□□□ 0.32
CACNB1-206ENST00000539338 BMP2KLQ5H9B9 411 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 QTRT2Q9H974 415 aaKnown RBP17.05■□□□□ 0.32
CACNB1-206ENST00000539338 WWC2Q6AWC2 1192 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 DNAAF4Q8WXU2 420 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 GDPD2Q9HCC8 539 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 APBA3O96018 575 aa17.05■□□□□ 0.32
CACNB1-206ENST00000539338 LARP1Q6PKG0 1096 aaKnown RBP17.05■□□□□ 0.32
CACNB1-206ENST00000539338 ZFYVE27Q5T4F4 411 aa17.04■□□□□ 0.32
CACNB1-206ENST00000539338 JDP2Q8WYK2 163 aa17.04■□□□□ 0.32
CACNB1-206ENST00000539338 RAI14Q9P0K7 980 aa17.04■□□□□ 0.32
CACNB1-206ENST00000539338 PCDHB15Q9Y5E8 787 aa17.04■□□□□ 0.32
CACNB1-206ENST00000539338 ZNHIT6Q9NWK9 470 aaKnown RBP17.04■□□□□ 0.32
CACNB1-206ENST00000539338 NEO1Q92859 1461 aa17.04■□□□□ 0.32
CACNB1-206ENST00000539338 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
CACNB1-206ENST00000539338 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
CACNB1-206ENST00000539338 CBFA2T2O43439 604 aa17.03■□□□□ 0.32
CACNB1-206ENST00000539338 IGHMBP2P38935 993 aaKnown RBP17.03■□□□□ 0.32
CACNB1-206ENST00000539338 ODF2Q5BJF6 829 aa17.03■□□□□ 0.32
CACNB1-206ENST00000539338 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
CACNB1-206ENST00000539338 METTL24Q5JXM2 366 aa17.03■□□□□ 0.32
CACNB1-206ENST00000539338 CCDC183Q5T5S1 534 aa17.03■□□□□ 0.32
CACNB1-206ENST00000539338 AIDAQ96BJ3 306 aa17.03■□□□□ 0.32
CACNB1-206ENST00000539338 NOL7Q9UMY1 257 aaKnown RBP17.03■□□□□ 0.32
CACNB1-206ENST00000539338 PTPRCP08575 1304 aa17.02■□□□□ 0.32
CACNB1-206ENST00000539338 HSP90AB2PQ58FF8 381 aa17.02■□□□□ 0.32
CACNB1-206ENST00000539338 GPATCH8Q9UKJ3 1502 aaKnown RBP17.02■□□□□ 0.32
CACNB1-206ENST00000539338 GUCY1B3Q02153 619 aa17.02■□□□□ 0.32
CACNB1-206ENST00000539338 ZHX3Q9H4I2 956 aa17.02■□□□□ 0.32
CACNB1-206ENST00000539338 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.31
CACNB1-206ENST00000539338 LIMCH1Q9UPQ0 1083 aa17.02■□□□□ 0.31
CACNB1-206ENST00000539338 U3KPZ7 1027 aaPredicted RBP17.02■□□□□ 0.31
CACNB1-206ENST00000539338 NSD2O96028 1365 aa17.02■□□□□ 0.31
CACNB1-206ENST00000539338 MYO1BO43795 1136 aa17.01■□□□□ 0.31
CACNB1-206ENST00000539338 NOM1Q5C9Z4 860 aaKnown RBP17.01■□□□□ 0.31
CACNB1-206ENST00000539338 STIM1Q13586 685 aa17.01■□□□□ 0.31
CACNB1-206ENST00000539338 DHX8Q14562 1220 aaKnown RBP17.01■□□□□ 0.31
CACNB1-206ENST00000539338 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
CACNB1-206ENST00000539338 SH2B1Q9NRF2 756 aaPredicted RBP17.01■□□□□ 0.31
CACNB1-206ENST00000539338 ABCF2Q9UG63 623 aa17.01■□□□□ 0.31
CACNB1-206ENST00000539338 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
CACNB1-206ENST00000539338 PDIA4P13667 645 aaKnown RBP17■□□□□ 0.31
CACNB1-206ENST00000539338 AXDND1Q5T1B0 1012 aaPredicted RBP17■□□□□ 0.31
CACNB1-206ENST00000539338 ZSCAN29Q8IWY8 852 aaPredicted RBP17■□□□□ 0.31
CACNB1-206ENST00000539338 FLAD1Q8NFF5 587 aa17■□□□□ 0.31
CACNB1-206ENST00000539338 TTC22Q5TAA0 569 aa17■□□□□ 0.31
CACNB1-206ENST00000539338 TANGO6Q9C0B7 1094 aa17■□□□□ 0.31
CACNB1-206ENST00000539338 CFAP100Q494V2 611 aa17■□□□□ 0.31
CACNB1-206ENST00000539338 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
CACNB1-206ENST00000539338 KDM5BQ9UGL1 1544 aa17■□□□□ 0.31
CACNB1-206ENST00000539338 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
CACNB1-206ENST00000539338 SCAND2PQ9GZW5 306 aaPredicted RBP17■□□□□ 0.31
CACNB1-206ENST00000539338 DEF6Q9H4E7 631 aa17■□□□□ 0.31
CACNB1-206ENST00000539338 USP25Q9UHP3 1055 aa17■□□□□ 0.31
CACNB1-206ENST00000539338 SOGA3Q5TF21 947 aa16.99■□□□□ 0.31
CACNB1-206ENST00000539338 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
CACNB1-206ENST00000539338 BAG4O95429 457 aaKnown RBP16.99■□□□□ 0.31
CACNB1-206ENST00000539338 SMTNL1A8MU46 457 aa16.99■□□□□ 0.31
CACNB1-206ENST00000539338 CWC15Q9P013 229 aaKnown RBP16.99■□□□□ 0.31
CACNB1-206ENST00000539338 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
CACNB1-206ENST00000539338 NUP160Q12769 1436 aa16.98■□□□□ 0.31
CACNB1-206ENST00000539338 NUCB1Q02818 461 aa16.98■□□□□ 0.31
CACNB1-206ENST00000539338 RBM27Q9P2N5 1060 aaKnown RBP16.98■□□□□ 0.31
CACNB1-206ENST00000539338 CCDC66A2RUB6 948 aa16.98■□□□□ 0.31
CACNB1-206ENST00000539338 TNNQ9UQP3 1299 aa16.98■□□□□ 0.31
CACNB1-206ENST00000539338 IL16Q14005 1332 aa16.98■□□□□ 0.31
CACNB1-206ENST00000539338 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
CACNB1-206ENST00000539338 PLEKHH1Q9ULM0 1364 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 YEATS2Q9ULM3 1422 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 WASF1Q92558 559 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 AKAP2Q9Y2D5 859 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 MAP3K2Q9Y2U5 619 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 H0YHG0 523 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 SSBP05455 408 aaKnown RBP eCLIP16.97■□□□□ 0.31
CACNB1-206ENST00000539338 CHRNA2Q15822 529 aa16.97■□□□□ 0.31
CACNB1-206ENST00000539338 TFIP11Q9UBB9 837 aaKnown RBP16.97■□□□□ 0.31
CACNB1-206ENST00000539338 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
CACNB1-206ENST00000539338 RAPGEF6Q8TEU7 1601 aa16.96■□□□□ 0.31
CACNB1-206ENST00000539338 ECHDC1Q9NTX5 307 aa16.96■□□□□ 0.31
CACNB1-206ENST00000539338 ANXA1P04083 346 aa16.96■□□□□ 0.31
CACNB1-206ENST00000539338 GJB2P29033 226 aa16.96■□□□□ 0.31
CACNB1-206ENST00000539338 ZFYVE16Q7Z3T8 1539 aa16.96■□□□□ 0.31
CACNB1-206ENST00000539338 CCT2P78371 535 aaKnown RBP16.96■□□□□ 0.31
CACNB1-206ENST00000539338 RTCBQ9Y3I0 505 aaKnown RBP16.96■□□□□ 0.31
CACNB1-206ENST00000539338 CCDC82Q8N4S0 544 aa16.96■□□□□ 0.31
CACNB1-206ENST00000539338 C8orf76Q96K31 380 aa16.96■□□□□ 0.31
CACNB1-206ENST00000539338 MEIS3Q99687 375 aa16.96■□□□□ 0.31
CACNB1-206ENST00000539338 ARHGEF10O15013 1369 aa16.96■□□□□ 0.3
CACNB1-206ENST00000539338 PARD3Q8TEW0 1356 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms