RNA–Protein interactions for RNA: ENST00000539305.1

AP002991.1-201, humanhuman

TSL 4 BASIC

Gene AP002991.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002991.1-201ENST00000539305 UBR2Q8IWV8 1755 aa11.35□□□□□ -0.59
AP002991.1-201ENST00000539305 BRCA1P38398 1863 aaKnown RBP11.34□□□□□ -0.59
AP002991.1-201ENST00000539305 SENP3-EIF4A1A0A087X0R7 540 aa11.34□□□□□ -0.59
AP002991.1-201ENST00000539305 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
AP002991.1-201ENST00000539305 CANXP27824 592 aaKnown RBP11.34□□□□□ -0.59
AP002991.1-201ENST00000539305 CHRNA5P30532 468 aa11.34□□□□□ -0.59
AP002991.1-201ENST00000539305 PRKAR2BP31323 418 aa11.34□□□□□ -0.59
AP002991.1-201ENST00000539305 SIPA1L3O60292 1781 aaPredicted RBP11.33□□□□□ -0.59
AP002991.1-201ENST00000539305 NFIXQ14938 502 aa11.33□□□□□ -0.6
AP002991.1-201ENST00000539305 NARFQ9UHQ1 456 aa11.33□□□□□ -0.6
AP002991.1-201ENST00000539305 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
AP002991.1-201ENST00000539305 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
AP002991.1-201ENST00000539305 FCHSD2O94868 740 aa11.32□□□□□ -0.6
AP002991.1-201ENST00000539305 EIF5P55010 431 aaKnown RBP11.32□□□□□ -0.6
AP002991.1-201ENST00000539305 ZNF790Q6PG37 636 aa11.32□□□□□ -0.6
AP002991.1-201ENST00000539305 ARHGAP27Q6ZUM4 889 aa11.32□□□□□ -0.6
AP002991.1-201ENST00000539305 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
AP002991.1-201ENST00000539305 COL15A1P39059 1388 aa11.31□□□□□ -0.6
AP002991.1-201ENST00000539305 CEMIPQ8WUJ3 1361 aa11.31□□□□□ -0.6
AP002991.1-201ENST00000539305 ZPR1O75312 459 aa11.31□□□□□ -0.6
AP002991.1-201ENST00000539305 A1BGP04217 495 aa11.31□□□□□ -0.6
AP002991.1-201ENST00000539305 DCTN1Q14203 1278 aa11.31□□□□□ -0.6
AP002991.1-201ENST00000539305 MCM10Q7L590 875 aa11.31□□□□□ -0.6
AP002991.1-201ENST00000539305 GAS2L2Q8NHY3 880 aa11.31□□□□□ -0.6
AP002991.1-201ENST00000539305 GPBP1L1Q9HC44 474 aaPredicted RBP11.31□□□□□ -0.6
AP002991.1-201ENST00000539305 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
AP002991.1-201ENST00000539305 PIP4K2AP48426 406 aaPredicted RBP11.3□□□□□ -0.6
AP002991.1-201ENST00000539305 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
AP002991.1-201ENST00000539305 TEFQ10587 303 aa11.3□□□□□ -0.6
AP002991.1-201ENST00000539305 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
AP002991.1-201ENST00000539305 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
AP002991.1-201ENST00000539305 USP16Q9Y5T5 823 aa11.3□□□□□ -0.6
AP002991.1-201ENST00000539305 HEG1Q9ULI3 1381 aa11.29□□□□□ -0.6
AP002991.1-201ENST00000539305 KIF3CO14782 793 aa11.29□□□□□ -0.6
AP002991.1-201ENST00000539305 SERPINB2P05120 415 aa11.29□□□□□ -0.6
AP002991.1-201ENST00000539305 PRELPP51888 382 aa11.29□□□□□ -0.6
AP002991.1-201ENST00000539305 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
AP002991.1-201ENST00000539305 TTC5Q8N0Z6 440 aa11.29□□□□□ -0.6
AP002991.1-201ENST00000539305 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
AP002991.1-201ENST00000539305 ARFGEF1Q9Y6D6 1849 aa11.29□□□□□ -0.6
AP002991.1-201ENST00000539305 CARMIL3Q8ND23 1372 aa11.28□□□□□ -0.6
AP002991.1-201ENST00000539305 BTBD11A6QL63 1104 aa11.28□□□□□ -0.6
AP002991.1-201ENST00000539305 DALRD3Q5D0E6 543 aaKnown RBP11.28□□□□□ -0.6
AP002991.1-201ENST00000539305 TBC1D9BQ66K14 1250 aa11.28□□□□□ -0.6
AP002991.1-201ENST00000539305 CFAP53Q96M91 514 aa11.28□□□□□ -0.6
AP002991.1-201ENST00000539305 MIS18AQ9NYP9 233 aa11.28□□□□□ -0.6
AP002991.1-201ENST00000539305 NRXN2Q9P2S2 1712 aa11.28□□□□□ -0.6
AP002991.1-201ENST00000539305 SBF1O95248 1867 aa11.27□□□□□ -0.6
AP002991.1-201ENST00000539305 STARD3NLO95772 234 aa11.27□□□□□ -0.61
AP002991.1-201ENST00000539305 C9orf131Q5VYM1 1079 aa11.27□□□□□ -0.61
AP002991.1-201ENST00000539305 NMRK2Q9NPI5 230 aa11.27□□□□□ -0.61
AP002991.1-201ENST00000539305 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.61
AP002991.1-201ENST00000539305 ANKRD31Q8N7Z5 1873 aa11.26□□□□□ -0.61
AP002991.1-201ENST00000539305 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
AP002991.1-201ENST00000539305 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
AP002991.1-201ENST00000539305 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
AP002991.1-201ENST00000539305 FMNL2Q96PY5 1086 aa11.26□□□□□ -0.61
AP002991.1-201ENST00000539305 NUDCQ9Y266 331 aa11.26□□□□□ -0.61
AP002991.1-201ENST00000539305 CAMTA2O94983 1202 aa11.25□□□□□ -0.61
AP002991.1-201ENST00000539305 RASSF7Q02833 373 aa11.25□□□□□ -0.61
AP002991.1-201ENST00000539305 PLEKHF1Q96S99 279 aa11.25□□□□□ -0.61
AP002991.1-201ENST00000539305 DLG5Q8TDM6 1919 aa11.25□□□□□ -0.61
AP002991.1-201ENST00000539305 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
AP002991.1-201ENST00000539305 PRR5LQ6MZQ0 368 aa11.24□□□□□ -0.61
AP002991.1-201ENST00000539305 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
AP002991.1-201ENST00000539305 THUMPD2Q9BTF0 503 aaKnown RBP11.24□□□□□ -0.61
AP002991.1-201ENST00000539305 TEX13AQ9BXU3 409 aaPredicted RBP11.24□□□□□ -0.61
AP002991.1-201ENST00000539305 A0A087WZG4 1122 aa11.23□□□□□ -0.61
AP002991.1-201ENST00000539305 RNF181Q9P0P0 153 aa11.23□□□□□ -0.61
AP002991.1-201ENST00000539305 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
AP002991.1-201ENST00000539305 CCDC88AQ3V6T2 1871 aa11.23□□□□□ -0.61
AP002991.1-201ENST00000539305 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
AP002991.1-201ENST00000539305 RTF1Q92541 710 aaKnown RBP11.22□□□□□ -0.61
AP002991.1-201ENST00000539305 ZNF219Q9P2Y4 722 aaPredicted RBP11.22□□□□□ -0.61
AP002991.1-201ENST00000539305 COL11A2P13942 1736 aaPredicted RBP11.21□□□□□ -0.61
AP002991.1-201ENST00000539305 SCN7AQ01118 1682 aa11.21□□□□□ -0.61
AP002991.1-201ENST00000539305 H0YIN7 160 aa11.21□□□□□ -0.61
AP002991.1-201ENST00000539305 HTATSF1O43719 755 aaKnown RBP11.21□□□□□ -0.61
AP002991.1-201ENST00000539305 SNRPA1P09661 255 aaKnown RBP11.21□□□□□ -0.61
AP002991.1-201ENST00000539305 HSPA6P17066 643 aa11.21□□□□□ -0.61
AP002991.1-201ENST00000539305 HLFQ16534 295 aa11.21□□□□□ -0.61
AP002991.1-201ENST00000539305 DZIP3Q86Y13 1208 aaKnown RBP11.21□□□□□ -0.61
AP002991.1-201ENST00000539305 NFKBIEO00221 500 aa11.2□□□□□ -0.62
AP002991.1-201ENST00000539305 TTLL6Q8N841 843 aa11.2□□□□□ -0.62
AP002991.1-201ENST00000539305 SETDB2Q96T68 719 aa11.2□□□□□ -0.62
AP002991.1-201ENST00000539305 BRIP1Q9BX63 1249 aa11.2□□□□□ -0.62
AP002991.1-201ENST00000539305 RRAGCQ9HB90 399 aa11.2□□□□□ -0.62
AP002991.1-201ENST00000539305 SLX4Q8IY92 1834 aa11.2□□□□□ -0.62
AP002991.1-201ENST00000539305 PCNTO95613 3336 aa11.2□□□□□ -0.62
AP002991.1-201ENST00000539305 BCORQ6W2J9 1755 aa11.19□□□□□ -0.62
AP002991.1-201ENST00000539305 C21orf2O43822 256 aa11.19□□□□□ -0.62
AP002991.1-201ENST00000539305 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
AP002991.1-201ENST00000539305 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
AP002991.1-201ENST00000539305 ZNF622Q969S3 477 aaKnown RBP eCLIP11.19□□□□□ -0.62
AP002991.1-201ENST00000539305 TOMM70O94826 608 aa11.18□□□□□ -0.62
AP002991.1-201ENST00000539305 EIF4A1P60842 406 aaKnown RBP11.18□□□□□ -0.62
AP002991.1-201ENST00000539305 HTRA3P83110 453 aa11.18□□□□□ -0.62
AP002991.1-201ENST00000539305 NGEFQ8N5V2 710 aa11.18□□□□□ -0.62
AP002991.1-201ENST00000539305 CACNA1SQ13698 1873 aa11.17□□□□□ -0.62
AP002991.1-201ENST00000539305 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms