RNA–Protein interactions for RNA: ENST00000539154.1

MEFV-208, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

TSL 5

Gene MEFV, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-208ENST00000539154 ZPR1O75312 459 aa12.61□□□□□ -0.39
MEFV-208ENST00000539154 KCNA3P22001 575 aa12.61□□□□□ -0.39
MEFV-208ENST00000539154 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
MEFV-208ENST00000539154 BICDL1Q6ZP65 573 aa12.61□□□□□ -0.39
MEFV-208ENST00000539154 MRC1P22897 1456 aa12.6□□□□□ -0.39
MEFV-208ENST00000539154 KIF3CO14782 793 aa12.6□□□□□ -0.39
MEFV-208ENST00000539154 PER1O15534 1290 aaPredicted RBP12.6□□□□□ -0.39
MEFV-208ENST00000539154 NMRK2Q9NPI5 230 aa12.6□□□□□ -0.39
MEFV-208ENST00000539154 AFDNP55196 1824 aaKnown RBP12.6□□□□□ -0.39
MEFV-208ENST00000539154 SOS1Q07889 1333 aaPredicted RBP12.6□□□□□ -0.39
MEFV-208ENST00000539154 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
MEFV-208ENST00000539154 COL15A1P39059 1388 aa12.59□□□□□ -0.39
MEFV-208ENST00000539154 POLRMTO00411 1230 aaKnown RBP12.59□□□□□ -0.39
MEFV-208ENST00000539154 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
MEFV-208ENST00000539154 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
MEFV-208ENST00000539154 CCDC24Q8N4L8 307 aa12.59□□□□□ -0.39
MEFV-208ENST00000539154 ARFGEF1Q9Y6D6 1849 aa12.58□□□□□ -0.4
MEFV-208ENST00000539154 HSPA6P17066 643 aa12.58□□□□□ -0.4
MEFV-208ENST00000539154 RASSF7Q02833 373 aa12.58□□□□□ -0.4
MEFV-208ENST00000539154 NFIXQ14938 502 aa12.58□□□□□ -0.4
MEFV-208ENST00000539154 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
MEFV-208ENST00000539154 CEP350Q5VT06 3117 aa12.58□□□□□ -0.4
MEFV-208ENST00000539154 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
MEFV-208ENST00000539154 DALRD3Q5D0E6 543 aaKnown RBP12.57□□□□□ -0.4
MEFV-208ENST00000539154 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
MEFV-208ENST00000539154 CARMIL3Q8ND23 1372 aa12.56□□□□□ -0.4
MEFV-208ENST00000539154 KCNQ3O43525 872 aa12.56□□□□□ -0.4
MEFV-208ENST00000539154 TM4SF1P30408 202 aa12.56□□□□□ -0.4
MEFV-208ENST00000539154 PIP4K2AP48426 406 aaPredicted RBP12.56□□□□□ -0.4
MEFV-208ENST00000539154 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
MEFV-208ENST00000539154 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
MEFV-208ENST00000539154 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
MEFV-208ENST00000539154 HTRA3P83110 453 aa12.55□□□□□ -0.4
MEFV-208ENST00000539154 TEFQ10587 303 aa12.55□□□□□ -0.4
MEFV-208ENST00000539154 IL17REQ8NFR9 667 aa12.55□□□□□ -0.4
MEFV-208ENST00000539154 ZNF496Q96IT1 587 aaPredicted RBP12.55□□□□□ -0.4
MEFV-208ENST00000539154 NARFQ9UHQ1 456 aa12.55□□□□□ -0.4
MEFV-208ENST00000539154 SIPA1L3O60292 1781 aaPredicted RBP12.54□□□□□ -0.4
MEFV-208ENST00000539154 SERPINB2P05120 415 aa12.54□□□□□ -0.4
MEFV-208ENST00000539154 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
MEFV-208ENST00000539154 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
MEFV-208ENST00000539154 TBC1D2BQ9UPU7 963 aa12.54□□□□□ -0.4
MEFV-208ENST00000539154 GNAT3A8MTJ3 354 aa12.53□□□□□ -0.4
MEFV-208ENST00000539154 TBC1D9BQ66K14 1250 aa12.53□□□□□ -0.4
MEFV-208ENST00000539154 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
MEFV-208ENST00000539154 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
MEFV-208ENST00000539154 RRAGCQ9HB90 399 aa12.53□□□□□ -0.4
MEFV-208ENST00000539154 SBF1O95248 1867 aa12.53□□□□□ -0.4
MEFV-208ENST00000539154 NRXN2Q9P2S2 1712 aa12.52□□□□□ -0.41
MEFV-208ENST00000539154 PRAMEF22A3QJZ6 481 aa12.52□□□□□ -0.41
MEFV-208ENST00000539154 A1BGP04217 495 aa12.52□□□□□ -0.41
MEFV-208ENST00000539154 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
MEFV-208ENST00000539154 C16orf71Q8IYS4 520 aaPredicted RBP12.52□□□□□ -0.41
MEFV-208ENST00000539154 GAS2L2Q8NHY3 880 aa12.52□□□□□ -0.41
MEFV-208ENST00000539154 CACNA1SQ13698 1873 aa12.52□□□□□ -0.41
MEFV-208ENST00000539154 HEG1Q9ULI3 1381 aa12.52□□□□□ -0.41
MEFV-208ENST00000539154 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
MEFV-208ENST00000539154 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
MEFV-208ENST00000539154 PRELPP51888 382 aa12.51□□□□□ -0.41
MEFV-208ENST00000539154 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
MEFV-208ENST00000539154 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
MEFV-208ENST00000539154 MCM10Q7L590 875 aa12.51□□□□□ -0.41
MEFV-208ENST00000539154 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.41
MEFV-208ENST00000539154 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
MEFV-208ENST00000539154 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
MEFV-208ENST00000539154 CCDC88AQ3V6T2 1871 aa12.51□□□□□ -0.41
MEFV-208ENST00000539154 TOMM70O94826 608 aa12.5□□□□□ -0.41
MEFV-208ENST00000539154 STARD3NLO95772 234 aa12.5□□□□□ -0.41
MEFV-208ENST00000539154 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
MEFV-208ENST00000539154 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
MEFV-208ENST00000539154 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
MEFV-208ENST00000539154 RSPH6AQ9H0K4 717 aa12.5□□□□□ -0.41
MEFV-208ENST00000539154 TIAM2Q8IVF5 1701 aa12.5□□□□□ -0.41
MEFV-208ENST00000539154 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
MEFV-208ENST00000539154 NPHP1O15259 732 aa12.49□□□□□ -0.41
MEFV-208ENST00000539154 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
MEFV-208ENST00000539154 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
MEFV-208ENST00000539154 WDR90Q96KV7 1748 aa12.48□□□□□ -0.41
MEFV-208ENST00000539154 FAM177BA6PVY3 158 aa12.48□□□□□ -0.41
MEFV-208ENST00000539154 H0YIN7 160 aa12.48□□□□□ -0.41
MEFV-208ENST00000539154 PPP2R1AP30153 589 aa12.48□□□□□ -0.41
MEFV-208ENST00000539154 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
MEFV-208ENST00000539154 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
MEFV-208ENST00000539154 NPC1L1Q9UHC9 1359 aa12.47□□□□□ -0.41
MEFV-208ENST00000539154 KDM2BQ8NHM5 1336 aa12.47□□□□□ -0.41
MEFV-208ENST00000539154 A0A087WZG4 1122 aa12.47□□□□□ -0.41
MEFV-208ENST00000539154 APLP1P51693 650 aa12.47□□□□□ -0.41
MEFV-208ENST00000539154 PRR5LQ6MZQ0 368 aa12.47□□□□□ -0.41
MEFV-208ENST00000539154 TTLL6Q8N841 843 aa12.47□□□□□ -0.41
MEFV-208ENST00000539154 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
MEFV-208ENST00000539154 USP16Q9Y5T5 823 aa12.47□□□□□ -0.41
MEFV-208ENST00000539154 BCORQ6W2J9 1755 aa12.47□□□□□ -0.41
MEFV-208ENST00000539154 C21orf2O43822 256 aa12.46□□□□□ -0.41
MEFV-208ENST00000539154 NPM2Q86SE8 214 aaKnown RBP12.46□□□□□ -0.41
MEFV-208ENST00000539154 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
MEFV-208ENST00000539154 NFKBIEO00221 500 aa12.45□□□□□ -0.42
MEFV-208ENST00000539154 CAMTA2O94983 1202 aa12.45□□□□□ -0.42
MEFV-208ENST00000539154 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
MEFV-208ENST00000539154 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
MEFV-208ENST00000539154 CNBD1Q8NA66 436 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms