RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 SBF2Q86WG5 1849 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 SLC4A2P04920 1241 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 PIP4K2AP48426 406 aaPredicted RBP11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 LINC00116Q8NCU8 138 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 AK7Q96M32 723 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 BCL2L13Q9BXK5 485 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 SMC4Q9NTJ3 1288 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 CCDC87Q9NVE4 849 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 CHPF2Q9P2E5 772 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 RCAN3Q9UKA8 241 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 KCPQ6ZWJ8 1503 aa11.03□□□□□ -0.64
LPCAT3-208ENST00000538987 KDM3BQ7LBC6 1761 aa11.02□□□□□ -0.65
LPCAT3-208ENST00000538987 GNPATO15228 680 aa11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 ANXA1P04083 346 aa11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 AIMP1Q12904 312 aaKnown RBP11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 ALDH1L2Q3SY69 923 aa11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 NBPF14Q5TI25 921 aa11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 SSH1Q8WYL5 1049 aa11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 FRAT1Q92837 279 aaPredicted RBP11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 DDX21Q9NR30 783 aaKnown RBP eCLIP11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 HYPKQ9NX55 129 aa11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 TFCP2L1Q9NZI6 479 aa11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 RTCBQ9Y3I0 505 aaKnown RBP11.01□□□□□ -0.65
LPCAT3-208ENST00000538987 PAPPAQ13219 1627 aa11□□□□□ -0.65
LPCAT3-208ENST00000538987 MSH5O43196 834 aa11□□□□□ -0.65
LPCAT3-208ENST00000538987 BCAR3O75815 825 aa11□□□□□ -0.65
LPCAT3-208ENST00000538987 PHF14O94880 888 aa11□□□□□ -0.65
LPCAT3-208ENST00000538987 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
LPCAT3-208ENST00000538987 INTS5Q6P9B9 1019 aaKnown RBP11□□□□□ -0.65
LPCAT3-208ENST00000538987 STK32BQ9NY57 414 aa11□□□□□ -0.65
LPCAT3-208ENST00000538987 ZBTB1Q9Y2K1 713 aa11□□□□□ -0.65
LPCAT3-208ENST00000538987 RPS6KA4O75676 772 aa10.99□□□□□ -0.65
LPCAT3-208ENST00000538987 IL6STP40189 918 aaPredicted RBP10.99□□□□□ -0.65
LPCAT3-208ENST00000538987 PROSER3Q2NL68 480 aa10.99□□□□□ -0.65
LPCAT3-208ENST00000538987 TRAPPC3LQ5T215 181 aa10.99□□□□□ -0.65
LPCAT3-208ENST00000538987 COPS6Q7L5N1 327 aa10.99□□□□□ -0.65
LPCAT3-208ENST00000538987 MRPL50Q8N5N7 158 aaKnown RBP10.99□□□□□ -0.65
LPCAT3-208ENST00000538987 PHAXQ9H814 394 aaKnown RBP10.99□□□□□ -0.65
LPCAT3-208ENST00000538987 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
LPCAT3-208ENST00000538987 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
LPCAT3-208ENST00000538987 EP400Q96L91 3159 aa10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 IPO8O15397 1037 aaKnown RBP10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 DDX58O95786 925 aaKnown RBP10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 FKBP5Q13451 457 aaPredicted RBP10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 PDIA6Q15084 440 aa10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 KIF6Q6ZMV9 814 aa10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 SMIM5Q71RC9 77 aa10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 XAGE3Q8WTP9 111 aa10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 NOB1Q9ULX3 412 aaKnown RBP10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 UBR2Q8IWV8 1755 aa10.98□□□□□ -0.65
LPCAT3-208ENST00000538987 A0A087WZG4 1122 aa10.97□□□□□ -0.65
LPCAT3-208ENST00000538987 RFC4P35249 363 aa10.97□□□□□ -0.65
LPCAT3-208ENST00000538987 G2E3Q7L622 706 aa10.97□□□□□ -0.65
LPCAT3-208ENST00000538987 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
LPCAT3-208ENST00000538987 DZIP3Q86Y13 1208 aaKnown RBP10.97□□□□□ -0.65
LPCAT3-208ENST00000538987 TBC1D2BQ9UPU7 963 aa10.97□□□□□ -0.65
LPCAT3-208ENST00000538987 TNS1Q9HBL0 1735 aaKnown RBP10.97□□□□□ -0.65
LPCAT3-208ENST00000538987 KIF16BQ96L93 1317 aa10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 ZPR1O75312 459 aa10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 EIF5P55010 431 aaKnown RBP10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 FLIIQ13045 1269 aa10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 SLC15A2Q16348 729 aa10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 ZNF827Q17R98 1081 aa10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 FLAD1Q8NFF5 587 aa10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 AKT1S1Q96B36 256 aa10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 SUPT16HQ9Y5B9 1047 aaKnown RBP10.96□□□□□ -0.65
LPCAT3-208ENST00000538987 SSFA2P28290 1259 aa10.95□□□□□ -0.66
LPCAT3-208ENST00000538987 ZKSCAN2Q63HK3 967 aa10.95□□□□□ -0.66
LPCAT3-208ENST00000538987 SLC4A10Q6U841 1118 aa10.95□□□□□ -0.66
LPCAT3-208ENST00000538987 TTLL7Q6ZT98 887 aa10.95□□□□□ -0.66
LPCAT3-208ENST00000538987 ZBTB3Q9H5J0 574 aa10.95□□□□□ -0.66
LPCAT3-208ENST00000538987 LY75O60449 1722 aa10.95□□□□□ -0.66
LPCAT3-208ENST00000538987 COL15A1P39059 1388 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 PTPRCP08575 1304 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 PI4KAP2A4QPH2 592 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 PLIN1O60240 522 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 ADRA2BP18089 450 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 KSR2Q6VAB6 950 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 PI4KAP1Q8N8J0 262 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 CLUAP1Q96AJ1 413 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 API5Q9BZZ5 524 aaKnown RBP10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 ANO8Q9HCE9 1232 aaPredicted RBP10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 MAP3K2Q9Y2U5 619 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 TJP1Q07157 1748 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 C5P01031 1676 aa10.94□□□□□ -0.66
LPCAT3-208ENST00000538987 MS4A1P11836 297 aa10.93□□□□□ -0.66
LPCAT3-208ENST00000538987 BRPF1P55201 1214 aaPredicted RBP10.93□□□□□ -0.66
LPCAT3-208ENST00000538987 NEXNQ0ZGT2 675 aa10.93□□□□□ -0.66
LPCAT3-208ENST00000538987 USPL1Q5W0Q7 1092 aa10.93□□□□□ -0.66
LPCAT3-208ENST00000538987 ATF7IPQ6VMQ6 1270 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms