RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 CRYBG1Q9Y4K1 1723 aa8.44□□□□□ -1.06
SP140-212ENST00000538494 NUTM2FA1L443 756 aa8.44□□□□□ -1.06
SP140-212ENST00000538494 PLCB2Q00722 1185 aa8.44□□□□□ -1.06
SP140-212ENST00000538494 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
SP140-212ENST00000538494 AATKQ6ZMQ8 1374 aa8.44□□□□□ -1.06
SP140-212ENST00000538494 TRPM3Q9HCF6 1732 aaPredicted RBP8.43□□□□□ -1.06
SP140-212ENST00000538494 ADH1BP00325 375 aa8.43□□□□□ -1.06
SP140-212ENST00000538494 WAPLQ7Z5K2 1190 aa8.43□□□□□ -1.06
SP140-212ENST00000538494 TMEM134Q9H6X4 195 aa8.43□□□□□ -1.06
SP140-212ENST00000538494 THRAP3Q9Y2W1 955 aaKnown RBP8.43□□□□□ -1.06
SP140-212ENST00000538494 ATP10DQ9P241 1426 aa8.43□□□□□ -1.06
SP140-212ENST00000538494 RGPD8O14715 1765 aaPredicted RBP8.43□□□□□ -1.06
SP140-212ENST00000538494 GRIN3BO60391 1043 aa8.42□□□□□ -1.06
SP140-212ENST00000538494 CFHP08603 1231 aa8.42□□□□□ -1.06
SP140-212ENST00000538494 FOXC1Q12948 553 aa8.42□□□□□ -1.06
SP140-212ENST00000538494 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
SP140-212ENST00000538494 RBM46Q8TBY0 533 aaKnown RBP8.42□□□□□ -1.06
SP140-212ENST00000538494 SLC6A16Q9GZN6 736 aa8.42□□□□□ -1.06
SP140-212ENST00000538494 PARP4Q9UKK3 1724 aaKnown RBP8.41□□□□□ -1.06
SP140-212ENST00000538494 VPS8Q8N3P4 1428 aa8.41□□□□□ -1.06
SP140-212ENST00000538494 PLEKHH1Q9ULM0 1364 aa8.41□□□□□ -1.06
SP140-212ENST00000538494 NR1I2O75469 434 aa8.41□□□□□ -1.06
SP140-212ENST00000538494 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
SP140-212ENST00000538494 GPBP1L1Q9HC44 474 aaPredicted RBP8.41□□□□□ -1.06
SP140-212ENST00000538494 CLTCL1P53675 1640 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 OVOS2A0A0G2JMS6 1433 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 OVOS2A0A0J9YW53 1432 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 OVOS2Q6IE36 1432 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 NUP155O75694 1391 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 DHX57Q6P158 1386 aaKnown RBP8.4□□□□□ -1.06
SP140-212ENST00000538494 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 PTF1AQ7RTS3 328 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 TNS4Q8IZW8 715 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 TCP11L2Q8N4U5 519 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 PRDM11Q9NQV5 511 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 STK32BQ9NY57 414 aa8.4□□□□□ -1.06
SP140-212ENST00000538494 SSH2Q76I76 1423 aa8.39□□□□□ -1.07
SP140-212ENST00000538494 YBX3P16989 372 aaKnown RBP eCLIP8.39□□□□□ -1.07
SP140-212ENST00000538494 TXNRD1Q16881 649 aa8.39□□□□□ -1.07
SP140-212ENST00000538494 FAM161AQ3B820 660 aa8.39□□□□□ -1.07
SP140-212ENST00000538494 LMOD2Q6P5Q4 547 aa8.39□□□□□ -1.07
SP140-212ENST00000538494 DACH1Q9UI36 760 aa8.39□□□□□ -1.07
SP140-212ENST00000538494 ADGRG1Q9Y653 693 aa8.39□□□□□ -1.07
SP140-212ENST00000538494 KNDC1Q76NI1 1749 aa8.39□□□□□ -1.07
SP140-212ENST00000538494 ATP7BP35670 1465 aa8.38□□□□□ -1.07
SP140-212ENST00000538494 KIF1BO60333 1816 aa8.38□□□□□ -1.07
SP140-212ENST00000538494 ROCK1Q13464 1354 aa8.38□□□□□ -1.07
SP140-212ENST00000538494 KIAA0232Q92628 1395 aa8.38□□□□□ -1.07
SP140-212ENST00000538494 SLC10A3P09131 477 aa8.38□□□□□ -1.07
SP140-212ENST00000538494 MLLT3P42568 568 aaPredicted RBP8.38□□□□□ -1.07
SP140-212ENST00000538494 PTGDRQ13258 359 aa8.38□□□□□ -1.07
SP140-212ENST00000538494 SCUBE3Q8IX30 993 aa8.38□□□□□ -1.07
SP140-212ENST00000538494 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
SP140-212ENST00000538494 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
SP140-212ENST00000538494 ANKARQ7Z5J8 1434 aa8.37□□□□□ -1.07
SP140-212ENST00000538494 PPLO60437 1756 aa8.37□□□□□ -1.07
SP140-212ENST00000538494 PAPPAQ13219 1627 aa8.36□□□□□ -1.07
SP140-212ENST00000538494 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
SP140-212ENST00000538494 KLRG1Q96E93 195 aa8.36□□□□□ -1.07
SP140-212ENST00000538494 STRN4Q9NRL3 753 aa8.36□□□□□ -1.07
SP140-212ENST00000538494 ACIN1Q9UKV3 1341 aaKnown RBP8.35□□□□□ -1.07
SP140-212ENST00000538494 IFT172Q9UG01 1749 aa8.35□□□□□ -1.07
SP140-212ENST00000538494 LMO7Q8WWI1 1683 aa8.35□□□□□ -1.07
SP140-212ENST00000538494 WFS1O76024 890 aa8.35□□□□□ -1.07
SP140-212ENST00000538494 CHRNA2Q15822 529 aa8.35□□□□□ -1.07
SP140-212ENST00000538494 PUS10Q3MIT2 529 aaKnown RBP8.35□□□□□ -1.07
SP140-212ENST00000538494 NLGN2Q8NFZ4 835 aa8.35□□□□□ -1.07
SP140-212ENST00000538494 TSHZ2Q9NRE2 1034 aa8.35□□□□□ -1.07
SP140-212ENST00000538494 USP35Q9P2H5 1018 aa8.35□□□□□ -1.07
SP140-212ENST00000538494 CPDO75976 1380 aa8.35□□□□□ -1.07
SP140-212ENST00000538494 TOMM70O94826 608 aa8.34□□□□□ -1.07
SP140-212ENST00000538494 PMFBP1Q8TBY8 1022 aa8.34□□□□□ -1.07
SP140-212ENST00000538494 SPSB2Q99619 263 aa8.34□□□□□ -1.07
SP140-212ENST00000538494 GMPR2Q9P2T1 348 aaKnown RBP8.34□□□□□ -1.07
SP140-212ENST00000538494 GPRASP1Q5JY77 1395 aa8.34□□□□□ -1.07
SP140-212ENST00000538494 AXIN1O15169 862 aa8.33□□□□□ -1.08
SP140-212ENST00000538494 MARCH10Q8NA82 808 aaPredicted RBP8.33□□□□□ -1.08
SP140-212ENST00000538494 PHRF1Q9P1Y6 1649 aaKnown RBP8.32□□□□□ -1.08
SP140-212ENST00000538494 ADGRF5Q8IZF2 1346 aa8.32□□□□□ -1.08
SP140-212ENST00000538494 QSER1Q2KHR3 1735 aa8.32□□□□□ -1.08
SP140-212ENST00000538494 WDR90Q96KV7 1748 aa8.32□□□□□ -1.08
SP140-212ENST00000538494 YTHDC2Q9H6S0 1430 aaKnown RBP8.32□□□□□ -1.08
SP140-212ENST00000538494 EVA1CP58658 441 aa8.32□□□□□ -1.08
SP140-212ENST00000538494 CYP4X1Q8N118 509 aa8.32□□□□□ -1.08
SP140-212ENST00000538494 CRIPAKQ8N1N5 446 aa8.32□□□□□ -1.08
SP140-212ENST00000538494 STK26Q9P289 416 aa8.32□□□□□ -1.08
SP140-212ENST00000538494 WWC3Q9ULE0 1092 aa8.32□□□□□ -1.08
SP140-212ENST00000538494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.31□□□□□ -1.08
SP140-212ENST00000538494 CD2BP2O95400 341 aaKnown RBP8.31□□□□□ -1.08
SP140-212ENST00000538494 TMEM132EQ6IEE7 984 aa8.31□□□□□ -1.08
SP140-212ENST00000538494 TOR4AQ9NXH8 423 aa8.31□□□□□ -1.08
SP140-212ENST00000538494 CRB1P82279 1406 aa8.3□□□□□ -1.08
SP140-212ENST00000538494 LRRC37A3O60309 1634 aa8.3□□□□□ -1.08
SP140-212ENST00000538494 ARHGEF28Q8N1W1 1705 aaKnown RBP8.3□□□□□ -1.08
SP140-212ENST00000538494 AVPP01185 164 aa8.3□□□□□ -1.08
SP140-212ENST00000538494 POLD1P28340 1107 aa8.3□□□□□ -1.08
SP140-212ENST00000538494 RPIAP49247 311 aa8.3□□□□□ -1.08
SP140-212ENST00000538494 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
SP140-212ENST00000538494 DDB1Q16531 1140 aa8.3□□□□□ -1.08
SP140-212ENST00000538494 ZNF827Q17R98 1081 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms