RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 KLRG1Q96E93 195 aa19.12■□□□□ 0.65
SMARCA4-206ENST00000538456 SLC52A2Q9HAB3 445 aa19.12■□□□□ 0.65
SMARCA4-206ENST00000538456 SLC39A6Q13433 755 aa19.11■□□□□ 0.65
SMARCA4-206ENST00000538456 AKAP4Q5JQC9 854 aa19.11■□□□□ 0.65
SMARCA4-206ENST00000538456 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
SMARCA4-206ENST00000538456 LGR6Q9HBX8 967 aa19.11■□□□□ 0.65
SMARCA4-206ENST00000538456 MRC1P22897 1456 aa19.1■□□□□ 0.65
SMARCA4-206ENST00000538456 COL15A1P39059 1388 aa19.1■□□□□ 0.65
SMARCA4-206ENST00000538456 CCDC88AQ3V6T2 1871 aa19.1■□□□□ 0.65
SMARCA4-206ENST00000538456 TIAM2Q8IVF5 1701 aa19.1■□□□□ 0.65
SMARCA4-206ENST00000538456 NRXN2Q9P2S2 1712 aa19.1■□□□□ 0.65
SMARCA4-206ENST00000538456 CYP19A1P11511 503 aaPredicted RBP19.09■□□□□ 0.65
SMARCA4-206ENST00000538456 NFIXQ14938 502 aa19.09■□□□□ 0.65
SMARCA4-206ENST00000538456 KNSTRNQ9Y448 316 aa19.09■□□□□ 0.65
SMARCA4-206ENST00000538456 HMOX1P09601 288 aa19.08■□□□□ 0.64
SMARCA4-206ENST00000538456 ZBTB1Q9Y2K1 713 aa19.08■□□□□ 0.64
SMARCA4-206ENST00000538456 RNMTO43148 476 aaKnown RBP19.07■□□□□ 0.64
SMARCA4-206ENST00000538456 JMYQ8N9B5 988 aa19.07■□□□□ 0.64
SMARCA4-206ENST00000538456 SMC1BQ8NDV3 1235 aa19.07■□□□□ 0.64
SMARCA4-206ENST00000538456 NARFQ9UHQ1 456 aa19.07■□□□□ 0.64
SMARCA4-206ENST00000538456 CLSPNQ9HAW4 1339 aa19.06■□□□□ 0.64
SMARCA4-206ENST00000538456 COL13A1Q5TAT6 717 aaPredicted RBP19.06■□□□□ 0.64
SMARCA4-206ENST00000538456 UBR2Q8IWV8 1755 aa19.06■□□□□ 0.64
SMARCA4-206ENST00000538456 CARMIL3Q8ND23 1372 aa19.06■□□□□ 0.64
SMARCA4-206ENST00000538456 SERPINB2P05120 415 aa19.05■□□□□ 0.64
SMARCA4-206ENST00000538456 LMNB1P20700 586 aa19.05■□□□□ 0.64
SMARCA4-206ENST00000538456 PRELPP51888 382 aa19.05■□□□□ 0.64
SMARCA4-206ENST00000538456 BCL2L12Q9HB09 334 aa19.05■□□□□ 0.64
SMARCA4-206ENST00000538456 ZC3H4Q9UPT8 1303 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-206ENST00000538456 CANXP27824 592 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-206ENST00000538456 BICDL1Q6ZP65 573 aa19.04■□□□□ 0.64
SMARCA4-206ENST00000538456 C2CD5Q86YS7 1000 aa19.04■□□□□ 0.64
SMARCA4-206ENST00000538456 TTLL6Q8N841 843 aa19.03■□□□□ 0.64
SMARCA4-206ENST00000538456 ANKRD31Q8N7Z5 1873 aa19.03■□□□□ 0.64
SMARCA4-206ENST00000538456 GLTPD2A6NH11 291 aa19.02■□□□□ 0.64
SMARCA4-206ENST00000538456 CAPN15O75808 1086 aa19.02■□□□□ 0.64
SMARCA4-206ENST00000538456 MTHFSDQ2M296 383 aaKnown RBP19.02■□□□□ 0.64
SMARCA4-206ENST00000538456 AMER1Q5JTC6 1135 aaPredicted RBP19.02■□□□□ 0.64
SMARCA4-206ENST00000538456 COL11A2P13942 1736 aaPredicted RBP19.01■□□□□ 0.63
SMARCA4-206ENST00000538456 VEGFAP15692 232 aaPredicted RBP19.01■□□□□ 0.63
SMARCA4-206ENST00000538456 H0YIN7 160 aa19■□□□□ 0.63
SMARCA4-206ENST00000538456 NFKBIEO00221 500 aa19■□□□□ 0.63
SMARCA4-206ENST00000538456 VSIG10Q8N0Z9 540 aa19■□□□□ 0.63
SMARCA4-206ENST00000538456 SCN7AQ01118 1682 aa19■□□□□ 0.63
SMARCA4-206ENST00000538456 TTC5Q8N0Z6 440 aa18.99■□□□□ 0.63
SMARCA4-206ENST00000538456 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
SMARCA4-206ENST00000538456 ZNF330Q9Y3S2 320 aaPredicted RBP18.99■□□□□ 0.63
SMARCA4-206ENST00000538456 CACNA1SQ13698 1873 aa18.99■□□□□ 0.63
SMARCA4-206ENST00000538456 ZNF622Q969S3 477 aaKnown RBP eCLIP18.98■□□□□ 0.631e-11■□□□□ 11
SMARCA4-206ENST00000538456 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
SMARCA4-206ENST00000538456 STARD3NLO95772 234 aa18.97■□□□□ 0.63
SMARCA4-206ENST00000538456 TBC1D9BQ66K14 1250 aa18.97■□□□□ 0.63
SMARCA4-206ENST00000538456 TNS4Q8IZW8 715 aa18.97■□□□□ 0.63
SMARCA4-206ENST00000538456 CCDC24Q8N4L8 307 aa18.97■□□□□ 0.63
SMARCA4-206ENST00000538456 DICER1Q9UPY3 1922 aaKnown RBP18.97■□□□□ 0.63
SMARCA4-206ENST00000538456 FER1L6Q2WGJ9 1857 aa18.97■□□□□ 0.63
SMARCA4-206ENST00000538456 EIF5P55010 431 aaKnown RBP18.96■□□□□ 0.63
SMARCA4-206ENST00000538456 SIPA1L3O60292 1781 aaPredicted RBP18.96■□□□□ 0.63
SMARCA4-206ENST00000538456 A0A087WZG4 1122 aa18.95■□□□□ 0.62
SMARCA4-206ENST00000538456 C21orf2O43822 256 aa18.95■□□□□ 0.62
SMARCA4-206ENST00000538456 CC2D1BQ5T0F9 858 aaKnown RBP18.95■□□□□ 0.62
SMARCA4-206ENST00000538456 ZNF496Q96IT1 587 aaPredicted RBP18.95■□□□□ 0.62
SMARCA4-206ENST00000538456 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
SMARCA4-206ENST00000538456 HSPA1AP0DMV8 641 aaKnown RBP18.94■□□□□ 0.62
SMARCA4-206ENST00000538456 HSPA1BP0DMV9 641 aaKnown RBP18.94■□□□□ 0.62
SMARCA4-206ENST00000538456 KIF7Q2M1P5 1343 aa18.94■□□□□ 0.62
SMARCA4-206ENST00000538456 POTECB2RU33 542 aa18.93■□□□□ 0.62
SMARCA4-206ENST00000538456 PDE6BP35913 854 aa18.93■□□□□ 0.62
SMARCA4-206ENST00000538456 TEFQ10587 303 aa18.93■□□□□ 0.62
SMARCA4-206ENST00000538456 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
SMARCA4-206ENST00000538456 ERFEQ4G0M1 354 aa18.93■□□□□ 0.62
SMARCA4-206ENST00000538456 PRR5LQ6MZQ0 368 aa18.93■□□□□ 0.62
SMARCA4-206ENST00000538456 DPY19L2Q6NUT2 758 aa18.93■□□□□ 0.62
SMARCA4-206ENST00000538456 HEG1Q9ULI3 1381 aa18.93■□□□□ 0.62
SMARCA4-206ENST00000538456 NPHP1O15259 732 aa18.92■□□□□ 0.62
SMARCA4-206ENST00000538456 ZNF790Q6PG37 636 aa18.92■□□□□ 0.62
SMARCA4-206ENST00000538456 BRIP1Q9BX63 1249 aa18.92■□□□□ 0.62
SMARCA4-206ENST00000538456 SLX4Q8IY92 1834 aa18.92■□□□□ 0.62
SMARCA4-206ENST00000538456 U2SURPO15042 1029 aaKnown RBP18.91■□□□□ 0.62
SMARCA4-206ENST00000538456 BCORQ6W2J9 1755 aa18.91■□□□□ 0.62
SMARCA4-206ENST00000538456 COL3A1P02461 1466 aaPredicted RBP18.9■□□□□ 0.62
SMARCA4-206ENST00000538456 GNAT3A8MTJ3 354 aa18.9■□□□□ 0.62
SMARCA4-206ENST00000538456 CNBD1Q8NA66 436 aa18.9■□□□□ 0.62
SMARCA4-206ENST00000538456 IL17REQ8NFR9 667 aa18.9■□□□□ 0.62
SMARCA4-206ENST00000538456 ARFGEF2Q9Y6D5 1785 aa18.89■□□□□ 0.61
SMARCA4-206ENST00000538456 A1BGP04217 495 aa18.89■□□□□ 0.61
SMARCA4-206ENST00000538456 NPM2Q86SE8 214 aaKnown RBP18.89■□□□□ 0.61
SMARCA4-206ENST00000538456 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
SMARCA4-206ENST00000538456 TEX13AQ9BXU3 409 aaPredicted RBP18.89■□□□□ 0.61
SMARCA4-206ENST00000538456 TAOK3Q9H2K8 898 aa18.89■□□□□ 0.61
SMARCA4-206ENST00000538456 PDZRN3Q9UPQ7 1066 aa18.89■□□□□ 0.61
SMARCA4-206ENST00000538456 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
SMARCA4-206ENST00000538456 GAS2L2Q8NHY3 880 aa18.88■□□□□ 0.61
SMARCA4-206ENST00000538456 SETDB2Q96T68 719 aa18.88■□□□□ 0.61
SMARCA4-206ENST00000538456 PER1O15534 1290 aaPredicted RBP18.87■□□□□ 0.61
SMARCA4-206ENST00000538456 DDNO94850 711 aaPredicted RBP18.87■□□□□ 0.61
SMARCA4-206ENST00000538456 POTEIP0CG38 1075 aa18.87■□□□□ 0.61
SMARCA4-206ENST00000538456 POTEJP0CG39 1038 aa18.87■□□□□ 0.61
SMARCA4-206ENST00000538456 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
SMARCA4-206ENST00000538456 FMNL2Q96PY5 1086 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms