RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CCDC8Q9H0W5 538 aaPredicted RBP19.58■□□□□ 0.73
SCARB1-205ENST00000538291 ZNF219Q9P2Y4 722 aaPredicted RBP19.58■□□□□ 0.73
SCARB1-205ENST00000538291 EMILIN1Q9Y6C2 1016 aa19.58■□□□□ 0.73
SCARB1-205ENST00000538291 FKBP15Q5T1M5 1219 aa19.58■□□□□ 0.73
SCARB1-205ENST00000538291 CDC5LQ99459 802 aaKnown RBP19.58■□□□□ 0.73
SCARB1-205ENST00000538291 SMARCA5O60264 1052 aaPredicted RBP19.58■□□□□ 0.72
SCARB1-205ENST00000538291 KRT28Q7Z3Y7 464 aa19.58■□□□□ 0.72
SCARB1-205ENST00000538291 SSH1Q8WYL5 1049 aa19.58■□□□□ 0.72
SCARB1-205ENST00000538291 SH2B1Q9NRF2 756 aaPredicted RBP19.58■□□□□ 0.72
SCARB1-205ENST00000538291 GOLGA6L7A0A1B0GV03 622 aa19.58■□□□□ 0.72
SCARB1-205ENST00000538291 CCDC194A0A1B0GVG4 234 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 CCDC66A2RUB6 948 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 GPTP24298 496 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 MPNDQ8N594 471 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 IFNL2Q8IZJ0 200 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 KIF20AO95235 890 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 UBA5Q9GZZ9 404 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 ZBTB3Q9H5J0 574 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 CUL7Q14999 1698 aa19.57■□□□□ 0.72
SCARB1-205ENST00000538291 SCAND2PQ9GZW5 306 aaPredicted RBP19.56■□□□□ 0.72
SCARB1-205ENST00000538291 GRPEL1Q9HAV7 217 aa19.56■□□□□ 0.72
SCARB1-205ENST00000538291 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
SCARB1-205ENST00000538291 IFIT3O14879 490 aaKnown RBP19.56■□□□□ 0.72
SCARB1-205ENST00000538291 SPA17Q15506 151 aa19.56■□□□□ 0.72
SCARB1-205ENST00000538291 DDX46Q7L014 1031 aaKnown RBP19.56■□□□□ 0.72
SCARB1-205ENST00000538291 CATIPQ7Z7H3 387 aa19.56■□□□□ 0.72
SCARB1-205ENST00000538291 VPS36Q86VN1 386 aa19.56■□□□□ 0.72
SCARB1-205ENST00000538291 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-205ENST00000538291 F6X3S4 739 aa19.55■□□□□ 0.72
SCARB1-205ENST00000538291 KIAA0754O94854 1291 aa19.55■□□□□ 0.72
SCARB1-205ENST00000538291 FGFR1OPO95684 399 aaKnown RBP19.55■□□□□ 0.72
SCARB1-205ENST00000538291 FEZ1Q99689 392 aa19.55■□□□□ 0.72
SCARB1-205ENST00000538291 ADGRL1O94910 1474 aa19.55■□□□□ 0.72
SCARB1-205ENST00000538291 TTC21BQ7Z4L5 1316 aa19.55■□□□□ 0.72
SCARB1-205ENST00000538291 TTF1Q15361 905 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-205ENST00000538291 TIAM1Q13009 1591 aa19.55■□□□□ 0.72
SCARB1-205ENST00000538291 GOLGA8AA7E2F4 631 aa19.54■□□□□ 0.72
SCARB1-205ENST00000538291 GOLGA8BA8MQT2 603 aa19.54■□□□□ 0.72
SCARB1-205ENST00000538291 SSRP1Q08945 709 aaKnown RBP19.54■□□□□ 0.72
SCARB1-205ENST00000538291 CALRP27797 417 aaKnown RBP19.54■□□□□ 0.72
SCARB1-205ENST00000538291 NLRP5P59047 1200 aa19.54■□□□□ 0.72
SCARB1-205ENST00000538291 CCDC82Q8N4S0 544 aa19.54■□□□□ 0.72
SCARB1-205ENST00000538291 CACNA2D4Q7Z3S7 1137 aa19.54■□□□□ 0.72
SCARB1-205ENST00000538291 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
SCARB1-205ENST00000538291 CCDC148Q8NFR7 591 aa19.54■□□□□ 0.72
SCARB1-205ENST00000538291 RARSP54136 660 aaKnown RBP19.54■□□□□ 0.72
SCARB1-205ENST00000538291 BAG3O95817 575 aa19.53■□□□□ 0.72
SCARB1-205ENST00000538291 BAG4O95429 457 aaKnown RBP19.53■□□□□ 0.72
SCARB1-205ENST00000538291 LDHAL6AQ6ZMR3 332 aa19.53■□□□□ 0.72
SCARB1-205ENST00000538291 CCDC150Q8NCX0 1101 aa19.53■□□□□ 0.72
SCARB1-205ENST00000538291 CCDC97Q96F63 343 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-205ENST00000538291 CDK13Q14004 1512 aaKnown RBP19.53■□□□□ 0.72
SCARB1-205ENST00000538291 CCDC12Q8WUD4 166 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-205ENST00000538291 CABP5Q9NP86 173 aa19.53■□□□□ 0.72
SCARB1-205ENST00000538291 ANO10Q9NW15 660 aa19.53■□□□□ 0.72
SCARB1-205ENST00000538291 CEBPAP49715 358 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-205ENST00000538291 FBXO31Q5XUX0 539 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-205ENST00000538291 KLHL10Q6JEL2 608 aa19.53■□□□□ 0.72
SCARB1-205ENST00000538291 CWC25Q9NXE8 425 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-205ENST00000538291 PTPRCP08575 1304 aa19.52■□□□□ 0.72
SCARB1-205ENST00000538291 MCM4P33991 863 aa19.52■□□□□ 0.72
SCARB1-205ENST00000538291 FLIIQ13045 1269 aa19.52■□□□□ 0.72
SCARB1-205ENST00000538291 MYCNP04198 464 aaPredicted RBP19.52■□□□□ 0.72
SCARB1-205ENST00000538291 CAMK4Q16566 473 aa19.52■□□□□ 0.72
SCARB1-205ENST00000538291 CADPS2Q86UW7 1296 aa19.52■□□□□ 0.72
SCARB1-205ENST00000538291 SPTY2D1Q68D10 685 aaPredicted RBP19.52■□□□□ 0.72
SCARB1-205ENST00000538291 FAM193AP78312 1265 aa19.51■□□□□ 0.71
SCARB1-205ENST00000538291 IDI1Q13907 227 aa19.51■□□□□ 0.71
SCARB1-205ENST00000538291 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.51■□□□□ 0.713e-11■■■□□ 17
SCARB1-205ENST00000538291 HLA-DOAP06340 250 aa19.51■□□□□ 0.71
SCARB1-205ENST00000538291 KIF5BP33176 963 aa19.51■□□□□ 0.71
SCARB1-205ENST00000538291 RFC4P35249 363 aa19.51■□□□□ 0.71
SCARB1-205ENST00000538291 TMEM87AQ8NBN3 555 aa19.51■□□□□ 0.71
SCARB1-205ENST00000538291 ANAPC15P60006 121 aa19.51■□□□□ 0.71
SCARB1-205ENST00000538291 EVI5LQ96CN4 794 aa19.5■□□□□ 0.71
SCARB1-205ENST00000538291 SFPQP23246 707 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■■□□□ 12.9
SCARB1-205ENST00000538291 PDE4BQ07343 736 aa19.5■□□□□ 0.71
SCARB1-205ENST00000538291 MAP3K2Q9Y2U5 619 aa19.5■□□□□ 0.71
SCARB1-205ENST00000538291 ECHDC1Q9NTX5 307 aa19.5■□□□□ 0.71
SCARB1-205ENST00000538291 BICRAQ9NZM4 1560 aa19.49■□□□□ 0.71
SCARB1-205ENST00000538291 ZNF622Q969S3 477 aaKnown RBP eCLIP19.49■□□□□ 0.711e-7■□□□□ 9.5
SCARB1-205ENST00000538291 PLEKHH1Q9ULM0 1364 aa19.49■□□□□ 0.71
SCARB1-205ENST00000538291 GUCY1B3Q02153 619 aa19.49■□□□□ 0.71
SCARB1-205ENST00000538291 CETN1Q12798 172 aa19.48■□□□□ 0.71
SCARB1-205ENST00000538291 LIMCH1Q9UPQ0 1083 aa19.48■□□□□ 0.71
SCARB1-205ENST00000538291 ST5P78524 1137 aa19.48■□□□□ 0.71
SCARB1-205ENST00000538291 ADGRF5Q8IZF2 1346 aa19.48■□□□□ 0.71
SCARB1-205ENST00000538291 NAIPQ13075 1403 aa19.48■□□□□ 0.71
SCARB1-205ENST00000538291 ZSCAN12O43309 604 aa19.48■□□□□ 0.71
SCARB1-205ENST00000538291 CCDC184Q52MB2 194 aa19.48■□□□□ 0.71
SCARB1-205ENST00000538291 GOLIM4O00461 696 aa19.47■□□□□ 0.71
SCARB1-205ENST00000538291 MYO1BO43795 1136 aa19.47■□□□□ 0.71
SCARB1-205ENST00000538291 IQGAP2Q13576 1575 aa19.47■□□□□ 0.71
SCARB1-205ENST00000538291 TSPY2A6NKD2 308 aa19.47■□□□□ 0.71
SCARB1-205ENST00000538291 SNRPA1P09661 255 aaKnown RBP19.47■□□□□ 0.71
SCARB1-205ENST00000538291 SYCE3A1L190 88 aa19.47■□□□□ 0.71
SCARB1-205ENST00000538291 CALML4Q96GE6 196 aa19.47■□□□□ 0.71
SCARB1-205ENST00000538291 KAT14Q9H8E8 782 aa19.47■□□□□ 0.71
SCARB1-205ENST00000538291 TCP11L1Q9NUJ3 509 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms