RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 TTC21AQ8NDW8 1320 aa14□□□□□ -0.17
PRKAB1-204ENST00000538271 CA12O43570 354 aa14□□□□□ -0.17
PRKAB1-204ENST00000538271 GYS1P13807 737 aa14□□□□□ -0.17
PRKAB1-204ENST00000538271 ECE1P42892 770 aa14□□□□□ -0.17
PRKAB1-204ENST00000538271 ADAMTS7Q9UKP4 1686 aa13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 NFKBIEO00221 500 aa13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 DDNO94850 711 aaPredicted RBP13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 GRM1Q13255 1194 aa13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 CYP4F22Q6NT55 531 aa13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 PAXIP1Q6ZW49 1069 aaPredicted RBP13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 SLC17A8Q8NDX2 589 aa13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 MEGF6O75095 1541 aa13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 ITGB4P16144 1822 aa13.99□□□□□ -0.17
PRKAB1-204ENST00000538271 A0A0C4DFX4 3053 aa13.98□□□□□ -0.17
PRKAB1-204ENST00000538271 LOC102724428A0A0B4J2F2 783 aa13.98□□□□□ -0.17
PRKAB1-204ENST00000538271 SIK1P57059 783 aa13.98□□□□□ -0.17
PRKAB1-204ENST00000538271 TAF1DQ9H5J8 278 aaPredicted RBP13.98□□□□□ -0.17
PRKAB1-204ENST00000538271 SCN4AP35499 1836 aa13.98□□□□□ -0.17
PRKAB1-204ENST00000538271 PITPNM2Q9BZ72 1349 aa13.97□□□□□ -0.17
PRKAB1-204ENST00000538271 IQCA1LA6NCM1 817 aa13.97□□□□□ -0.17
PRKAB1-204ENST00000538271 ITPK1Q13572 414 aa13.97□□□□□ -0.17
PRKAB1-204ENST00000538271 ERFEQ4G0M1 354 aa13.97□□□□□ -0.17
PRKAB1-204ENST00000538271 MPHOSPH9Q99550 1183 aa13.97□□□□□ -0.17
PRKAB1-204ENST00000538271 KDM2AQ9Y2K7 1162 aa13.97□□□□□ -0.17
PRKAB1-204ENST00000538271 MAP2K2P36507 400 aa13.96□□□□□ -0.17
PRKAB1-204ENST00000538271 NBPF1Q3BBV0 1214 aa13.96□□□□□ -0.17
PRKAB1-204ENST00000538271 ARHGEF1Q92888 912 aaKnown RBP13.96□□□□□ -0.17
PRKAB1-204ENST00000538271 LTV1Q96GA3 475 aaPredicted RBP13.96□□□□□ -0.17
PRKAB1-204ENST00000538271 SZT2Q5T011 3432 aa13.95□□□□□ -0.18
PRKAB1-204ENST00000538271 AOC2O75106 756 aa13.95□□□□□ -0.18
PRKAB1-204ENST00000538271 EAPPQ56P03 285 aaPredicted RBP13.95□□□□□ -0.18
PRKAB1-204ENST00000538271 CNTROBQ8N137 903 aa13.95□□□□□ -0.18
PRKAB1-204ENST00000538271 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
PRKAB1-204ENST00000538271 ADAMTSL1Q8N6G6 1762 aa13.95□□□□□ -0.18
PRKAB1-204ENST00000538271 RGPD2P0DJD1 1756 aa13.94□□□□□ -0.18
PRKAB1-204ENST00000538271 DDR1Q08345 913 aa13.93□□□□□ -0.18
PRKAB1-204ENST00000538271 PIGBQ92521 554 aa13.93□□□□□ -0.18
PRKAB1-204ENST00000538271 RFC4P35249 363 aa13.92□□□□□ -0.18
PRKAB1-204ENST00000538271 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
PRKAB1-204ENST00000538271 MAP1SQ66K74 1059 aaPredicted RBP13.92□□□□□ -0.18
PRKAB1-204ENST00000538271 L3MBTL3Q96JM7 780 aaPredicted RBP13.92□□□□□ -0.18
PRKAB1-204ENST00000538271 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
PRKAB1-204ENST00000538271 DLEC1Q9Y238 1755 aa13.91□□□□□ -0.18
PRKAB1-204ENST00000538271 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
PRKAB1-204ENST00000538271 DCAF11Q8TEB1 546 aa13.91□□□□□ -0.18
PRKAB1-204ENST00000538271 IP6K1Q92551 441 aa13.91□□□□□ -0.18
PRKAB1-204ENST00000538271 DDX21Q9NR30 783 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRKAB1-204ENST00000538271 BRPF1P55201 1214 aaPredicted RBP13.9□□□□□ -0.18
PRKAB1-204ENST00000538271 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
PRKAB1-204ENST00000538271 CGNL1Q0VF96 1302 aa13.9□□□□□ -0.19
PRKAB1-204ENST00000538271 FER1L6Q2WGJ9 1857 aa13.89□□□□□ -0.19
PRKAB1-204ENST00000538271 PCDH11XQ9BZA7 1347 aa13.88□□□□□ -0.19
PRKAB1-204ENST00000538271 PCDH11YQ9BZA8 1340 aa13.88□□□□□ -0.19
PRKAB1-204ENST00000538271 OTUD5Q96G74 571 aa13.87□□□□□ -0.19
PRKAB1-204ENST00000538271 TRPM7Q96QT4 1865 aa13.87□□□□□ -0.19
PRKAB1-204ENST00000538271 CD163L1Q9NR16 1453 aa13.87□□□□□ -0.19
PRKAB1-204ENST00000538271 KTN1Q86UP2 1357 aaKnown RBP13.86□□□□□ -0.19
PRKAB1-204ENST00000538271 POLRMTO00411 1230 aaKnown RBP13.86□□□□□ -0.19
PRKAB1-204ENST00000538271 EPHX2P34913 555 aa13.86□□□□□ -0.19
PRKAB1-204ENST00000538271 FMR1Q06787 632 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRKAB1-204ENST00000538271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRKAB1-204ENST00000538271 HACL1Q9UJ83 578 aa13.86□□□□□ -0.19
PRKAB1-204ENST00000538271 TLL2Q9Y6L7 1015 aa13.86□□□□□ -0.19
PRKAB1-204ENST00000538271 CENPJQ9HC77 1338 aaPredicted RBP13.86□□□□□ -0.19
PRKAB1-204ENST00000538271 TRIOBPQ9H2D6 2365 aa13.86□□□□□ -0.19
PRKAB1-204ENST00000538271 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
PRKAB1-204ENST00000538271 PNMA8AQ86V59 439 aaPredicted RBP13.85□□□□□ -0.19
PRKAB1-204ENST00000538271 NME9Q86XW9 330 aa13.85□□□□□ -0.19
PRKAB1-204ENST00000538271 STAC3Q96MF2 364 aa13.85□□□□□ -0.19
PRKAB1-204ENST00000538271 ASAP1Q9ULH1 1129 aa13.85□□□□□ -0.19
PRKAB1-204ENST00000538271 CIZ1Q9ULV3 898 aaPredicted RBP13.85□□□□□ -0.19
PRKAB1-204ENST00000538271 MKI67P46013 3256 aaKnown RBP13.84□□□□□ -0.19
PRKAB1-204ENST00000538271 CYP27B1O15528 508 aa13.84□□□□□ -0.19
PRKAB1-204ENST00000538271 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
PRKAB1-204ENST00000538271 RC3H1Q5TC82 1133 aaKnown RBP13.84□□□□□ -0.19
PRKAB1-204ENST00000538271 CST9Q5W186 159 aa13.84□□□□□ -0.19
PRKAB1-204ENST00000538271 RAPGEF4Q8WZA2 1011 aa13.84□□□□□ -0.19
PRKAB1-204ENST00000538271 SRP68Q9UHB9 627 aaKnown RBP13.84□□□□□ -0.19
PRKAB1-204ENST00000538271 SMG6Q86US8 1419 aaKnown RBP13.83□□□□□ -0.2
PRKAB1-204ENST00000538271 HPS5Q9UPZ3 1129 aa13.83□□□□□ -0.2
PRKAB1-204ENST00000538271 MON2Q7Z3U7 1717 aa13.83□□□□□ -0.2
PRKAB1-204ENST00000538271 MYH14Q7Z406 1995 aaKnown RBP13.83□□□□□ -0.2
PRKAB1-204ENST00000538271 LTBP3Q9NS15 1303 aa13.83□□□□□ -0.2
PRKAB1-204ENST00000538271 AFDNP55196 1824 aaKnown RBP13.83□□□□□ -0.2
PRKAB1-204ENST00000538271 COL6A3P12111 3177 aa13.82□□□□□ -0.2
PRKAB1-204ENST00000538271 TATP17735 454 aaPredicted RBP13.82□□□□□ -0.2
PRKAB1-204ENST00000538271 TM4SF1P30408 202 aa13.82□□□□□ -0.2
PRKAB1-204ENST00000538271 NUBP1P53384 320 aa13.82□□□□□ -0.2
PRKAB1-204ENST00000538271 SLC39A7Q92504 469 aa13.82□□□□□ -0.2
PRKAB1-204ENST00000538271 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
PRKAB1-204ENST00000538271 C21orf2O43822 256 aa13.81□□□□□ -0.2
PRKAB1-204ENST00000538271 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
PRKAB1-204ENST00000538271 MAMSTRQ6ZN01 415 aa13.81□□□□□ -0.2
PRKAB1-204ENST00000538271 C2CD5Q86YS7 1000 aa13.81□□□□□ -0.2
PRKAB1-204ENST00000538271 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
PRKAB1-204ENST00000538271 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
PRKAB1-204ENST00000538271 TAOK3Q9H2K8 898 aa13.81□□□□□ -0.2
PRKAB1-204ENST00000538271 MAP3K19Q56UN5 1328 aa13.81□□□□□ -0.2
PRKAB1-204ENST00000538271 CNTNAP4Q9C0A0 1308 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms