RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
USP44-203ENST00000537435 SRGAP3O43295 1099 aa17.41■□□□□ 0.38
USP44-203ENST00000537435 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
USP44-203ENST00000537435 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
USP44-203ENST00000537435 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
USP44-203ENST00000537435 KCNQ3O43525 872 aa17.41■□□□□ 0.38
USP44-203ENST00000537435 MAP4K4O95819 1239 aaPredicted RBP17.41■□□□□ 0.38
USP44-203ENST00000537435 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
USP44-203ENST00000537435 IL17RAQ96F46 866 aa17.41■□□□□ 0.38
USP44-203ENST00000537435 PI4KAP2A4QPH2 592 aa17.4■□□□□ 0.38
USP44-203ENST00000537435 BRD1O95696 1058 aa17.4■□□□□ 0.38
USP44-203ENST00000537435 HOXB7P09629 217 aa17.4■□□□□ 0.38
USP44-203ENST00000537435 BEND3Q5T5X7 828 aa17.4■□□□□ 0.38
USP44-203ENST00000537435 PI4KAP1Q8N8J0 262 aa17.4■□□□□ 0.38
USP44-203ENST00000537435 PI4K2BQ8TCG2 481 aa17.4■□□□□ 0.38
USP44-203ENST00000537435 RBM33Q96EV2 1170 aaKnown RBP17.4■□□□□ 0.38
USP44-203ENST00000537435 INTS4Q96HW7 963 aaKnown RBP17.4■□□□□ 0.38
USP44-203ENST00000537435 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
USP44-203ENST00000537435 ANXA1P04083 346 aa17.39■□□□□ 0.37
USP44-203ENST00000537435 NAP1L5Q96NT1 182 aaPredicted RBP17.39■□□□□ 0.37
USP44-203ENST00000537435 EPB41L2O43491 1005 aaKnown RBP17.39■□□□□ 0.37
USP44-203ENST00000537435 HSPA4P34932 840 aa17.39■□□□□ 0.37
USP44-203ENST00000537435 MED1Q15648 1581 aaPredicted RBP17.39■□□□□ 0.37
USP44-203ENST00000537435 PRIM1P49642 420 aaKnown RBP17.38■□□□□ 0.37
USP44-203ENST00000537435 TEFQ10587 303 aa17.38■□□□□ 0.37
USP44-203ENST00000537435 RBSNQ9H1K0 784 aa17.38■□□□□ 0.37
USP44-203ENST00000537435 LTN1O94822 1766 aa17.38■□□□□ 0.37
USP44-203ENST00000537435 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
USP44-203ENST00000537435 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
USP44-203ENST00000537435 TMEM63CQ9P1W3 806 aa17.38■□□□□ 0.37
USP44-203ENST00000537435 NSFL1CQ9UNZ2 370 aaKnown RBP17.38■□□□□ 0.37
USP44-203ENST00000537435 NFAT5O94916 1531 aa17.37■□□□□ 0.37
USP44-203ENST00000537435 PSME1Q06323 249 aa17.37■□□□□ 0.37
USP44-203ENST00000537435 AKAP4Q5JQC9 854 aa17.37■□□□□ 0.37
USP44-203ENST00000537435 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
USP44-203ENST00000537435 CHMP4AQ9BY43 222 aa17.37■□□□□ 0.37
USP44-203ENST00000537435 SGSM2O43147 1006 aa17.36■□□□□ 0.37
USP44-203ENST00000537435 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
USP44-203ENST00000537435 MPRIPQ6WCQ1 1025 aa17.36■□□□□ 0.37
USP44-203ENST00000537435 CNTROBQ8N137 903 aa17.36■□□□□ 0.37
USP44-203ENST00000537435 KCNH5Q8NCM2 988 aa17.36■□□□□ 0.37
USP44-203ENST00000537435 ADCY9O60503 1353 aa17.35■□□□□ 0.37
USP44-203ENST00000537435 PLEKHO1Q53GL0 409 aaPredicted RBP17.35■□□□□ 0.37
USP44-203ENST00000537435 HSP90AB4PQ58FF6 505 aa17.35■□□□□ 0.37
USP44-203ENST00000537435 RAD50Q92878 1312 aa17.35■□□□□ 0.37
USP44-203ENST00000537435 MBD3O95983 291 aa17.34■□□□□ 0.37
USP44-203ENST00000537435 SYCE3A1L190 88 aa17.33■□□□□ 0.37
USP44-203ENST00000537435 LRSAM1Q6UWE0 723 aa17.33■□□□□ 0.37
USP44-203ENST00000537435 KDM3BQ7LBC6 1761 aa17.33■□□□□ 0.37
USP44-203ENST00000537435 OS9Q13438 667 aaPredicted RBP17.33■□□□□ 0.36
USP44-203ENST00000537435 LSG1Q9H089 658 aaKnown RBP17.33■□□□□ 0.36
USP44-203ENST00000537435 DBF4Q9UBU7 674 aaPredicted RBP17.33■□□□□ 0.36
USP44-203ENST00000537435 SNX14Q9Y5W7 946 aa17.33■□□□□ 0.36
USP44-203ENST00000537435 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
USP44-203ENST00000537435 ANKLE2Q86XL3 938 aa17.32■□□□□ 0.36
USP44-203ENST00000537435 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
USP44-203ENST00000537435 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
USP44-203ENST00000537435 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
USP44-203ENST00000537435 ZSCAN30Q86W11 494 aa17.32■□□□□ 0.36
USP44-203ENST00000537435 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
USP44-203ENST00000537435 C1orf141Q5JVX7 400 aa17.31■□□□□ 0.36
USP44-203ENST00000537435 MAP3K2Q9Y2U5 619 aa17.31■□□□□ 0.36
USP44-203ENST00000537435 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
USP44-203ENST00000537435 MTX1Q13505 466 aa17.31■□□□□ 0.36
USP44-203ENST00000537435 FOXD4L6Q3SYB3 417 aaPredicted RBP17.31■□□□□ 0.36
USP44-203ENST00000537435 FOXD4L3Q6VB84 417 aaPredicted RBP17.31■□□□□ 0.36
USP44-203ENST00000537435 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
USP44-203ENST00000537435 TTC41PQ6P2S7 1318 aa17.31■□□□□ 0.36
USP44-203ENST00000537435 GLRX3O76003 335 aaKnown RBP17.3■□□□□ 0.36
USP44-203ENST00000537435 RASEFQ8IZ41 740 aa17.3■□□□□ 0.36
USP44-203ENST00000537435 C9orf78Q9NZ63 289 aaPredicted RBP17.3■□□□□ 0.36
USP44-203ENST00000537435 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
USP44-203ENST00000537435 PROSER3Q2NL68 480 aa17.3■□□□□ 0.36
USP44-203ENST00000537435 CLASRPQ8N2M8 674 aaKnown RBP17.3■□□□□ 0.36
USP44-203ENST00000537435 TTC14Q96N46 770 aa17.3■□□□□ 0.36
USP44-203ENST00000537435 PXDNQ92626 1479 aa17.3■□□□□ 0.36
USP44-203ENST00000537435 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
USP44-203ENST00000537435 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
USP44-203ENST00000537435 GCP02774 474 aa17.29■□□□□ 0.36
USP44-203ENST00000537435 PDLIM2Q96JY6 352 aa17.29■□□□□ 0.36
USP44-203ENST00000537435 SPG7Q9UQ90 795 aa17.29■□□□□ 0.36
USP44-203ENST00000537435 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
USP44-203ENST00000537435 ALDH1L1O75891 902 aa17.29■□□□□ 0.36
USP44-203ENST00000537435 ARHGEF25Q86VW2 580 aa17.29■□□□□ 0.36
USP44-203ENST00000537435 GDPD2Q9HCC8 539 aa17.29■□□□□ 0.36
USP44-203ENST00000537435 RGPD2P0DJD1 1756 aa17.29■□□□□ 0.36
USP44-203ENST00000537435 AK2P54819 239 aa17.28■□□□□ 0.36
USP44-203ENST00000537435 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
USP44-203ENST00000537435 KSR2Q6VAB6 950 aa17.28■□□□□ 0.36
USP44-203ENST00000537435 PA2G4Q9UQ80 394 aaKnown RBP17.28■□□□□ 0.36
USP44-203ENST00000537435 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
USP44-203ENST00000537435 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
USP44-203ENST00000537435 MSNP26038 577 aaKnown RBP17.28■□□□□ 0.36
USP44-203ENST00000537435 DIAPH3Q9NSV4 1193 aa17.28■□□□□ 0.36
USP44-203ENST00000537435 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.36
USP44-203ENST00000537435 CWF19L2Q2TBE0 894 aaKnown RBP17.27■□□□□ 0.36
USP44-203ENST00000537435 ANKRD24Q8TF21 1146 aa17.27■□□□□ 0.36
USP44-203ENST00000537435 LARP6Q9BRS8 491 aaKnown RBP17.27■□□□□ 0.36
USP44-203ENST00000537435 NCAPD2Q15021 1401 aa17.27■□□□□ 0.36
USP44-203ENST00000537435 ORAI2Q96SN7 254 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms