RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 STAP2Q9UGK3 403 aa16.71■□□□□ 0.27
SMG6-203ENST00000536871 RGPD5Q99666 1765 aa16.71■□□□□ 0.27
SMG6-203ENST00000536871 MEGF6O75095 1541 aa16.71■□□□□ 0.27
SMG6-203ENST00000536871 KDM6AO15550 1401 aaPredicted RBP16.71■□□□□ 0.27
SMG6-203ENST00000536871 PKD1L3Q7Z443 1732 aa16.71■□□□□ 0.27
SMG6-203ENST00000536871 WDR17Q8IZU2 1322 aa16.71■□□□□ 0.26
SMG6-203ENST00000536871 STRCQ7RTU9 1775 aa16.71■□□□□ 0.26
SMG6-203ENST00000536871 SCN11AQ9UI33 1791 aa16.71■□□□□ 0.26
SMG6-203ENST00000536871 XIRP1Q702N8 1843 aaKnown RBP16.7■□□□□ 0.26
SMG6-203ENST00000536871 ADCY9O60503 1353 aa16.7■□□□□ 0.26
SMG6-203ENST00000536871 EPB41L2O43491 1005 aaKnown RBP16.7■□□□□ 0.26
SMG6-203ENST00000536871 SDSP20132 328 aa16.7■□□□□ 0.26
SMG6-203ENST00000536871 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
SMG6-203ENST00000536871 LINS1Q8NG48 757 aa16.7■□□□□ 0.26
SMG6-203ENST00000536871 DDX17Q92841 729 aaKnown RBP16.7■□□□□ 0.26
SMG6-203ENST00000536871 PNMA6EA0A0J9YXQ4 647 aa16.69■□□□□ 0.26
SMG6-203ENST00000536871 MX1P20591 662 aa16.69■□□□□ 0.26
SMG6-203ENST00000536871 C16orf71Q8IYS4 520 aaPredicted RBP16.69■□□□□ 0.26
SMG6-203ENST00000536871 KIF1BPQ96EK5 621 aa16.69■□□□□ 0.26
SMG6-203ENST00000536871 ANTXR1Q9H6X2 564 aa16.69■□□□□ 0.26
SMG6-203ENST00000536871 PRDM11Q9NQV5 511 aa16.69■□□□□ 0.26
SMG6-203ENST00000536871 SALL3Q9BXA9 1300 aa16.69■□□□□ 0.26
SMG6-203ENST00000536871 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
SMG6-203ENST00000536871 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
SMG6-203ENST00000536871 PARP4Q9UKK3 1724 aaKnown RBP16.69■□□□□ 0.26
SMG6-203ENST00000536871 SMARCA5O60264 1052 aaPredicted RBP16.68■□□□□ 0.26
SMG6-203ENST00000536871 RABEP1Q15276 862 aa16.68■□□□□ 0.26
SMG6-203ENST00000536871 LARP1Q6PKG0 1096 aaKnown RBP16.68■□□□□ 0.26
SMG6-203ENST00000536871 CABLES1Q8TDN4 633 aa16.68■□□□□ 0.26
SMG6-203ENST00000536871 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
SMG6-203ENST00000536871 CHMP5Q9NZZ3 219 aa16.68■□□□□ 0.26
SMG6-203ENST00000536871 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
SMG6-203ENST00000536871 ERBB4Q15303 1308 aa16.68■□□□□ 0.26
SMG6-203ENST00000536871 PCDH11XQ9BZA7 1347 aa16.68■□□□□ 0.26
SMG6-203ENST00000536871 PCDH11YQ9BZA8 1340 aa16.68■□□□□ 0.26
SMG6-203ENST00000536871 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
SMG6-203ENST00000536871 PPP1R42Q7Z4L9 355 aa16.67■□□□□ 0.26
SMG6-203ENST00000536871 ERC1Q8IUD2 1116 aa16.67■□□□□ 0.26
SMG6-203ENST00000536871 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
SMG6-203ENST00000536871 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
SMG6-203ENST00000536871 UTYO14607 1347 aa16.67■□□□□ 0.26
SMG6-203ENST00000536871 APBB1O00213 710 aa16.67■□□□□ 0.26
SMG6-203ENST00000536871 ERC2O15083 957 aa16.67■□□□□ 0.26
SMG6-203ENST00000536871 NEXNQ0ZGT2 675 aa16.67■□□□□ 0.26
SMG6-203ENST00000536871 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
SMG6-203ENST00000536871 SRGAP3O43295 1099 aa16.66■□□□□ 0.26
SMG6-203ENST00000536871 CABP4P57796 275 aa16.66■□□□□ 0.26
SMG6-203ENST00000536871 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
SMG6-203ENST00000536871 ERVV-2B6SEH9 535 aa16.65■□□□□ 0.26
SMG6-203ENST00000536871 SURF6O75683 361 aaKnown RBP16.65■□□□□ 0.26
SMG6-203ENST00000536871 OTUD7AQ8TE49 926 aaPredicted RBP16.65■□□□□ 0.26
SMG6-203ENST00000536871 CARD10Q9BWT7 1032 aa16.65■□□□□ 0.26
SMG6-203ENST00000536871 CYP27B1O15528 508 aa16.65■□□□□ 0.26
SMG6-203ENST00000536871 NBPF7P0C2Y1 421 aaPredicted RBP16.65■□□□□ 0.26
SMG6-203ENST00000536871 USP26Q9BXU7 913 aa16.65■□□□□ 0.26
SMG6-203ENST00000536871 ZNF335Q9H4Z2 1342 aaPredicted RBP16.64■□□□□ 0.25
SMG6-203ENST00000536871 TOM1L2Q6ZVM7 507 aa16.64■□□□□ 0.25
SMG6-203ENST00000536871 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
SMG6-203ENST00000536871 RHPN1Q8TCX5 695 aa16.64■□□□□ 0.25
SMG6-203ENST00000536871 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
SMG6-203ENST00000536871 COL5A2P05997 1499 aaPredicted RBP16.63■□□□□ 0.25
SMG6-203ENST00000536871 PDIA6Q15084 440 aa16.63■□□□□ 0.25
SMG6-203ENST00000536871 NKX1-1Q15270 411 aaPredicted RBP16.63■□□□□ 0.25
SMG6-203ENST00000536871 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
SMG6-203ENST00000536871 KIF2CQ99661 725 aa16.63■□□□□ 0.25
SMG6-203ENST00000536871 TTC41PQ6P2S7 1318 aa16.63■□□□□ 0.25
SMG6-203ENST00000536871 GRM8O00222 908 aa16.63■□□□□ 0.25
SMG6-203ENST00000536871 K7ELQ4 463 aaPredicted RBP16.62■□□□□ 0.25
SMG6-203ENST00000536871 MCCP23508 829 aa16.62■□□□□ 0.25
SMG6-203ENST00000536871 USP42Q9H9J4 1324 aaKnown RBP16.61■□□□□ 0.25
SMG6-203ENST00000536871 IL2RBP14784 551 aa16.61■□□□□ 0.25
SMG6-203ENST00000536871 PROSER3Q2NL68 480 aa16.61■□□□□ 0.25
SMG6-203ENST00000536871 GPATCH3Q96I76 525 aa16.61■□□□□ 0.25
SMG6-203ENST00000536871 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
SMG6-203ENST00000536871 NHSL1Q5SYE7 1610 aa16.61■□□□□ 0.25
SMG6-203ENST00000536871 COL15A1P39059 1388 aa16.61■□□□□ 0.25
SMG6-203ENST00000536871 ANXA1P04083 346 aa16.61■□□□□ 0.25
SMG6-203ENST00000536871 METTL22Q9BUU2 404 aaPredicted RBP16.61■□□□□ 0.25
SMG6-203ENST00000536871 ST18O60284 1047 aa16.6■□□□□ 0.25
SMG6-203ENST00000536871 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
SMG6-203ENST00000536871 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
SMG6-203ENST00000536871 PTMSP20962 102 aa16.59■□□□□ 0.25
SMG6-203ENST00000536871 ANAPC15P60006 121 aa16.59■□□□□ 0.25
SMG6-203ENST00000536871 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
SMG6-203ENST00000536871 HSP90AA1P07900 732 aaKnown RBP16.59■□□□□ 0.25
SMG6-203ENST00000536871 ANKRD13DQ6ZTN6 518 aa16.59■□□□□ 0.25
SMG6-203ENST00000536871 TRIM6-TRIM34B2RNG4 842 aa16.58■□□□□ 0.24
SMG6-203ENST00000536871 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
SMG6-203ENST00000536871 GLRX3O76003 335 aaKnown RBP16.58■□□□□ 0.24
SMG6-203ENST00000536871 MCM2P49736 904 aa16.58■□□□□ 0.24
SMG6-203ENST00000536871 EVA1CP58658 441 aa16.58■□□□□ 0.24
SMG6-203ENST00000536871 CNTROBQ8N137 903 aa16.58■□□□□ 0.24
SMG6-203ENST00000536871 XAGE3Q8WTP9 111 aa16.58■□□□□ 0.24
SMG6-203ENST00000536871 ESYT1Q9BSJ8 1104 aa16.58■□□□□ 0.24
SMG6-203ENST00000536871 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
SMG6-203ENST00000536871 NEURL1BA8MQ27 555 aa16.57■□□□□ 0.24
SMG6-203ENST00000536871 COPS6Q7L5N1 327 aa16.57■□□□□ 0.24
SMG6-203ENST00000536871 ABCA3Q99758 1704 aa16.57■□□□□ 0.24
SMG6-203ENST00000536871 CHMLP26374 656 aa16.56■□□□□ 0.24
SMG6-203ENST00000536871 DDIT3P35638 169 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms