RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 KNDC1Q76NI1 1749 aa10.32□□□□□ -0.76
YBX3-206ENST00000536823 LAMC1P11047 1609 aa10.32□□□□□ -0.76
YBX3-206ENST00000536823 LRPPRCP42704 1394 aaKnown RBP10.31□□□□□ -0.76
YBX3-206ENST00000536823 TMEM151AQ8N4L1 468 aa10.31□□□□□ -0.76
YBX3-206ENST00000536823 JCADQ9P266 1359 aa10.3□□□□□ -0.76
YBX3-206ENST00000536823 GPR37O15354 613 aa10.3□□□□□ -0.76
YBX3-206ENST00000536823 KDM4AO75164 1064 aa10.3□□□□□ -0.76
YBX3-206ENST00000536823 CD46P15529 392 aa10.3□□□□□ -0.76
YBX3-206ENST00000536823 JUNDP17535 347 aa10.3□□□□□ -0.76
YBX3-206ENST00000536823 BRINP3Q76B58 766 aa10.3□□□□□ -0.76
YBX3-206ENST00000536823 HLA-CQ95604 372 aa10.3□□□□□ -0.76
YBX3-206ENST00000536823 CDC42BPGQ6DT37 1551 aa10.3□□□□□ -0.76
YBX3-206ENST00000536823 NHSL1Q5SYE7 1610 aa10.29□□□□□ -0.76
YBX3-206ENST00000536823 ABCC11Q96J66 1382 aa10.29□□□□□ -0.76
YBX3-206ENST00000536823 SCARF1Q14162 830 aa10.29□□□□□ -0.76
YBX3-206ENST00000536823 MRPL14Q6P1L8 145 aaKnown RBP10.29□□□□□ -0.76
YBX3-206ENST00000536823 YTHDC2Q9H6S0 1430 aaKnown RBP10.29□□□□□ -0.76
YBX3-206ENST00000536823 C1orf167Q5SNV9 1468 aa10.29□□□□□ -0.76
YBX3-206ENST00000536823 SOBPA7XYQ1 873 aa10.28□□□□□ -0.76
YBX3-206ENST00000536823 PURBQ96QR8 312 aaKnown RBP10.28□□□□□ -0.76
YBX3-206ENST00000536823 SHPRHQ149N8 1683 aa10.28□□□□□ -0.76
YBX3-206ENST00000536823 GDF11O95390 407 aa10.27□□□□□ -0.77
YBX3-206ENST00000536823 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
YBX3-206ENST00000536823 NUDT12Q9BQG2 462 aa10.27□□□□□ -0.77
YBX3-206ENST00000536823 C14orf93Q9H972 538 aaKnown RBP10.27□□□□□ -0.77
YBX3-206ENST00000536823 STK26Q9P289 416 aa10.27□□□□□ -0.77
YBX3-206ENST00000536823 RASSF7Q02833 373 aa10.26□□□□□ -0.77
YBX3-206ENST00000536823 TMEM132EQ6IEE7 984 aa10.26□□□□□ -0.77
YBX3-206ENST00000536823 ADGRB1O14514 1584 aa10.26□□□□□ -0.77
YBX3-206ENST00000536823 DLC1Q96QB1 1528 aa10.25□□□□□ -0.77
YBX3-206ENST00000536823 USP46P62068 366 aa10.25□□□□□ -0.77
YBX3-206ENST00000536823 SH3BP2P78314 561 aa10.25□□□□□ -0.77
YBX3-206ENST00000536823 CFAP70Q5T0N1 1121 aa10.25□□□□□ -0.77
YBX3-206ENST00000536823 TLL2Q9Y6L7 1015 aa10.25□□□□□ -0.77
YBX3-206ENST00000536823 DHX57Q6P158 1386 aaKnown RBP10.25□□□□□ -0.77
YBX3-206ENST00000536823 PLEKHH1Q9ULM0 1364 aa10.25□□□□□ -0.77
YBX3-206ENST00000536823 TESPA1A2RU30 521 aaPredicted RBP10.24□□□□□ -0.77
YBX3-206ENST00000536823 RNF225M0QZC1 329 aaPredicted RBP10.24□□□□□ -0.77
YBX3-206ENST00000536823 SOCS7O14512 581 aa10.24□□□□□ -0.77
YBX3-206ENST00000536823 WAPLQ7Z5K2 1190 aa10.24□□□□□ -0.77
YBX3-206ENST00000536823 LRP6O75581 1613 aa10.24□□□□□ -0.77
YBX3-206ENST00000536823 SPATA31A6Q5VVP1 1343 aa10.24□□□□□ -0.77
YBX3-206ENST00000536823 NNTQ13423 1086 aa10.23□□□□□ -0.77
YBX3-206ENST00000536823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.23□□□□□ -0.77
YBX3-206ENST00000536823 SIRT1Q96EB6 747 aa10.23□□□□□ -0.77
YBX3-206ENST00000536823 FMN2Q9NZ56 1722 aa10.23□□□□□ -0.77
YBX3-206ENST00000536823 HOXA2O43364 376 aa10.22□□□□□ -0.77
YBX3-206ENST00000536823 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
YBX3-206ENST00000536823 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
YBX3-206ENST00000536823 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
YBX3-206ENST00000536823 ORAI2Q96SN7 254 aa10.22□□□□□ -0.77
YBX3-206ENST00000536823 RGS17Q9UGC6 210 aaPredicted RBP10.22□□□□□ -0.77
YBX3-206ENST00000536823 SYMPKQ92797 1274 aaKnown RBP10.21□□□□□ -0.77
YBX3-206ENST00000536823 DDX17Q92841 729 aaKnown RBP10.21□□□□□ -0.77
YBX3-206ENST00000536823 PNPLA6Q8IY17 1366 aa10.21□□□□□ -0.78
YBX3-206ENST00000536823 ADGRB2O60241 1585 aa10.21□□□□□ -0.78
YBX3-206ENST00000536823 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
YBX3-206ENST00000536823 ADH1CP00326 375 aa10.2□□□□□ -0.78
YBX3-206ENST00000536823 TIMP2P16035 220 aa10.2□□□□□ -0.78
YBX3-206ENST00000536823 SOS2Q07890 1332 aaPredicted RBP10.2□□□□□ -0.78
YBX3-206ENST00000536823 LRRC59Q96AG4 307 aaKnown RBP10.2□□□□□ -0.78
YBX3-206ENST00000536823 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
YBX3-206ENST00000536823 KIAA1210Q9ULL0 1709 aa10.19□□□□□ -0.78
YBX3-206ENST00000536823 KIF1AQ12756 1690 aa10.19□□□□□ -0.78
YBX3-206ENST00000536823 PXDNQ92626 1479 aa10.19□□□□□ -0.78
YBX3-206ENST00000536823 NPHP3Q7Z494 1330 aa10.19□□□□□ -0.78
YBX3-206ENST00000536823 WDR4P57081 412 aaKnown RBP10.19□□□□□ -0.78
YBX3-206ENST00000536823 TULP1O00294 542 aaPredicted RBP10.18□□□□□ -0.78
YBX3-206ENST00000536823 MAN1A2O60476 641 aa10.18□□□□□ -0.78
YBX3-206ENST00000536823 SAFB2Q14151 953 aaKnown RBP eCLIP10.18□□□□□ -0.78
YBX3-206ENST00000536823 LINC01559Q495D7 138 aa10.18□□□□□ -0.78
YBX3-206ENST00000536823 RETREG3Q86VR2 466 aa10.18□□□□□ -0.78
YBX3-206ENST00000536823 ARHGEF28Q8N1W1 1705 aaKnown RBP10.18□□□□□ -0.78
YBX3-206ENST00000536823 ANKARQ7Z5J8 1434 aa10.17□□□□□ -0.78
YBX3-206ENST00000536823 PPFIA3O75145 1194 aa10.17□□□□□ -0.78
YBX3-206ENST00000536823 CCNYL3P0C7X3 344 aa10.17□□□□□ -0.78
YBX3-206ENST00000536823 ESCO1Q5FWF5 840 aa10.17□□□□□ -0.78
YBX3-206ENST00000536823 MEX3CQ5U5Q3 659 aaKnown RBP10.17□□□□□ -0.78
YBX3-206ENST00000536823 POTEAQ6S8J7 498 aa10.17□□□□□ -0.78
YBX3-206ENST00000536823 POGKQ9P215 609 aa10.17□□□□□ -0.78
YBX3-206ENST00000536823 TRAK1Q9UPV9 953 aa10.17□□□□□ -0.78
YBX3-206ENST00000536823 COL22A1Q8NFW1 1626 aaPredicted RBP10.17□□□□□ -0.78
YBX3-206ENST00000536823 NUTM2BA6NNL0 878 aaPredicted RBP10.16□□□□□ -0.78
YBX3-206ENST00000536823 NUTM2EB1AL46 878 aaPredicted RBP10.16□□□□□ -0.78
YBX3-206ENST00000536823 NUTM2AQ8IVF1 878 aaPredicted RBP10.16□□□□□ -0.78
YBX3-206ENST00000536823 ADAMTS8Q9UP79 889 aa10.16□□□□□ -0.78
YBX3-206ENST00000536823 EIF3AQ14152 1382 aaKnown RBP10.15□□□□□ -0.78
YBX3-206ENST00000536823 USP32Q8NFA0 1604 aa10.15□□□□□ -0.78
YBX3-206ENST00000536823 VARSP26640 1264 aaKnown RBP10.15□□□□□ -0.78
YBX3-206ENST00000536823 MPNDQ8N594 471 aa10.15□□□□□ -0.78
YBX3-206ENST00000536823 UNC93B1Q9H1C4 597 aa10.15□□□□□ -0.78
YBX3-206ENST00000536823 TULP4Q9NRJ4 1543 aa10.15□□□□□ -0.78
YBX3-206ENST00000536823 RGPD8O14715 1765 aaPredicted RBP10.15□□□□□ -0.78
YBX3-206ENST00000536823 FOXO3O43524 673 aa10.14□□□□□ -0.79
YBX3-206ENST00000536823 BAP1Q92560 729 aa10.14□□□□□ -0.79
YBX3-206ENST00000536823 MINK1Q8N4C8 1332 aaPredicted RBP10.13□□□□□ -0.79
YBX3-206ENST00000536823 MS4A1P11836 297 aa10.13□□□□□ -0.79
YBX3-206ENST00000536823 XPCQ01831 940 aaPredicted RBP10.13□□□□□ -0.79
YBX3-206ENST00000536823 C6orf118Q5T5N4 469 aa10.13□□□□□ -0.79
YBX3-206ENST00000536823 ZNF772Q68DY9 489 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms