RNA–Protein interactions for RNA: ENST00000536613.6

CACNB1-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-205ENST00000536613 FMNL2Q96PY5 1086 aa24.43■■□□□ 1.5
CACNB1-205ENST00000536613 HTATSF1O43719 755 aaKnown RBP24.42■■□□□ 1.5
CACNB1-205ENST00000536613 USPL1Q5W0Q7 1092 aa24.42■■□□□ 1.5
CACNB1-205ENST00000536613 TEX13AQ9BXU3 409 aaPredicted RBP24.42■■□□□ 1.5
CACNB1-205ENST00000536613 PXDNLA1KZ92 1463 aa24.42■■□□□ 1.5
CACNB1-205ENST00000536613 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
CACNB1-205ENST00000536613 TGFB2P61812 414 aa24.41■■□□□ 1.5
CACNB1-205ENST00000536613 DDR1Q08345 913 aa24.41■■□□□ 1.5
CACNB1-205ENST00000536613 NARFQ9UHQ1 456 aa24.41■■□□□ 1.5
CACNB1-205ENST00000536613 WWC3Q9ULE0 1092 aa24.41■■□□□ 1.5
CACNB1-205ENST00000536613 KIF13BQ9NQT8 1826 aa24.4■■□□□ 1.5
CACNB1-205ENST00000536613 KCNQ3O43525 872 aa24.4■■□□□ 1.5
CACNB1-205ENST00000536613 NEFMP07197 916 aa24.4■■□□□ 1.5
CACNB1-205ENST00000536613 DCTN1Q14203 1278 aa24.39■■□□□ 1.49
CACNB1-205ENST00000536613 TM4SF1P30408 202 aa24.38■■□□□ 1.49
CACNB1-205ENST00000536613 PLEKHF1Q96S99 279 aa24.38■■□□□ 1.49
CACNB1-205ENST00000536613 EIF5P55010 431 aaKnown RBP24.37■■□□□ 1.49
CACNB1-205ENST00000536613 KIAA1551Q9HCM1 1747 aa24.36■■□□□ 1.49
CACNB1-205ENST00000536613 A0A0G2JLW4 131 aa24.36■■□□□ 1.49
CACNB1-205ENST00000536613 POLRMTO00411 1230 aaKnown RBP24.36■■□□□ 1.49
CACNB1-205ENST00000536613 A0A087WZG4 1122 aa24.35■■□□□ 1.49
CACNB1-205ENST00000536613 DPEP1P16444 411 aa24.35■■□□□ 1.49
CACNB1-205ENST00000536613 PNNQ9H307 717 aaKnown RBP24.35■■□□□ 1.49
CACNB1-205ENST00000536613 BCL2L12Q9HB09 334 aa24.35■■□□□ 1.49
CACNB1-205ENST00000536613 NFIXQ14938 502 aa24.34■■□□□ 1.49
CACNB1-205ENST00000536613 IL6STP40189 918 aaPredicted RBP24.33■■□□□ 1.49
CACNB1-205ENST00000536613 TAF7Q15545 349 aaPredicted RBP24.33■■□□□ 1.49
CACNB1-205ENST00000536613 NFE2L2Q16236 605 aa24.33■■□□□ 1.49
CACNB1-205ENST00000536613 A1BGP04217 495 aa24.32■■□□□ 1.48
CACNB1-205ENST00000536613 MYBBP1AQ9BQG0 1328 aaKnown RBP24.32■■□□□ 1.48
CACNB1-205ENST00000536613 MAPK8IP3Q9UPT6 1336 aa24.32■■□□□ 1.48
CACNB1-205ENST00000536613 SNRPA1P09661 255 aaKnown RBP24.31■■□□□ 1.48
CACNB1-205ENST00000536613 BCS1LQ9Y276 419 aa24.31■■□□□ 1.48
CACNB1-205ENST00000536613 ZNF330Q9Y3S2 320 aaPredicted RBP24.31■■□□□ 1.48
CACNB1-205ENST00000536613 N4BP2Q86UW6 1770 aaPredicted RBP24.31■■□□□ 1.48
CACNB1-205ENST00000536613 KCNA3P22001 575 aa24.3■■□□□ 1.48
CACNB1-205ENST00000536613 USP16Q9Y5T5 823 aa24.3■■□□□ 1.48
CACNB1-205ENST00000536613 PRAMEF22A3QJZ6 481 aa24.29■■□□□ 1.48
CACNB1-205ENST00000536613 MIS18AQ9NYP9 233 aa24.28■■□□□ 1.48
CACNB1-205ENST00000536613 TBC1D2BQ9UPU7 963 aa24.28■■□□□ 1.48
CACNB1-205ENST00000536613 SERPINB2P05120 415 aa24.27■■□□□ 1.48
CACNB1-205ENST00000536613 NPM2Q86SE8 214 aaKnown RBP24.27■■□□□ 1.48
CACNB1-205ENST00000536613 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
CACNB1-205ENST00000536613 THUMPD2Q9BTF0 503 aaKnown RBP24.26■■□□□ 1.47
CACNB1-205ENST00000536613 PIM2Q9P1W9 311 aa24.26■■□□□ 1.47
CACNB1-205ENST00000536613 SCN7AQ01118 1682 aa24.26■■□□□ 1.47
CACNB1-205ENST00000536613 ADCY9O60503 1353 aa24.26■■□□□ 1.47
CACNB1-205ENST00000536613 ATP10DQ9P241 1426 aa24.26■■□□□ 1.47
CACNB1-205ENST00000536613 CHRNA5P30532 468 aa24.25■■□□□ 1.47
CACNB1-205ENST00000536613 BICDL1Q6ZP65 573 aa24.25■■□□□ 1.47
CACNB1-205ENST00000536613 NRXN2Q9P2S2 1712 aa24.24■■□□□ 1.47
CACNB1-205ENST00000536613 DLG5Q8TDM6 1919 aa24.24■■□□□ 1.47
CACNB1-205ENST00000536613 CAMTA2O94983 1202 aa24.24■■□□□ 1.47
CACNB1-205ENST00000536613 PIP4K2AP48426 406 aaPredicted RBP24.24■■□□□ 1.47
CACNB1-205ENST00000536613 TBC1D9BQ66K14 1250 aa24.24■■□□□ 1.47
CACNB1-205ENST00000536613 DALRD3Q5D0E6 543 aaKnown RBP24.23■■□□□ 1.47
CACNB1-205ENST00000536613 DZIP3Q86Y13 1208 aaKnown RBP24.23■■□□□ 1.47
CACNB1-205ENST00000536613 BRCA1P38398 1863 aaKnown RBP24.23■■□□□ 1.47
CACNB1-205ENST00000536613 NBPF26B4DH59 902 aa24.21■■□□□ 1.47
CACNB1-205ENST00000536613 NBPF10Q6P3W6 841 aaKnown RBP24.21■■□□□ 1.47
CACNB1-205ENST00000536613 ARHGAP27Q6ZUM4 889 aa24.21■■□□□ 1.47
CACNB1-205ENST00000536613 NBPF15Q8N660 670 aa24.21■■□□□ 1.47
CACNB1-205ENST00000536613 AFDNP55196 1824 aaKnown RBP24.21■■□□□ 1.47
CACNB1-205ENST00000536613 CARMIL3Q8ND23 1372 aa24.2■■□□□ 1.46
CACNB1-205ENST00000536613 RIPK4P57078 832 aa24.2■■□□□ 1.46
CACNB1-205ENST00000536613 PRKRIP1Q9H875 184 aaPredicted RBP24.2■■□□□ 1.46
CACNB1-205ENST00000536613 KDM3BQ7LBC6 1761 aa24.2■■□□□ 1.46
CACNB1-205ENST00000536613 GIGYF1O75420 1035 aaPredicted RBP24.19■■□□□ 1.46
CACNB1-205ENST00000536613 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
CACNB1-205ENST00000536613 EIF4A1P60842 406 aaKnown RBP24.19■■□□□ 1.46
CACNB1-205ENST00000536613 TMPOP42166 694 aaKnown RBP24.18■■□□□ 1.46
CACNB1-205ENST00000536613 SETDB2Q96T68 719 aa24.18■■□□□ 1.46
CACNB1-205ENST00000536613 LMOD3Q0VAK6 560 aa24.17■■□□□ 1.46
CACNB1-205ENST00000536613 WDR43Q15061 677 aaKnown RBP eCLIP24.17■■□□□ 1.46
CACNB1-205ENST00000536613 C1QTNF8P60827 252 aa24.16■■□□□ 1.46
CACNB1-205ENST00000536613 PRR5LQ6MZQ0 368 aa24.16■■□□□ 1.46
CACNB1-205ENST00000536613 CLEC4GQ6UXB4 293 aa24.16■■□□□ 1.46
CACNB1-205ENST00000536613 C2CD5Q86YS7 1000 aa24.16■■□□□ 1.46
CACNB1-205ENST00000536613 CCDC146Q8IYE0 955 aa24.16■■□□□ 1.46
CACNB1-205ENST00000536613 BCORQ6W2J9 1755 aa24.16■■□□□ 1.46
CACNB1-205ENST00000536613 ARFGEF1Q9Y6D6 1849 aa24.15■■□□□ 1.46
CACNB1-205ENST00000536613 GPBP1L1Q9HC44 474 aaPredicted RBP24.15■■□□□ 1.46
CACNB1-205ENST00000536613 TSPYL4Q9UJ04 414 aa24.15■■□□□ 1.46
CACNB1-205ENST00000536613 ZNF652Q9Y2D9 606 aa24.15■■□□□ 1.46
CACNB1-205ENST00000536613 LAMB4A4D0S4 1761 aa24.15■■□□□ 1.46
CACNB1-205ENST00000536613 H0YIN7 160 aa24.14■■□□□ 1.45
CACNB1-205ENST00000536613 RGL2O15211 777 aa24.14■■□□□ 1.45
CACNB1-205ENST00000536613 CNBD1Q8NA66 436 aa24.14■■□□□ 1.45
CACNB1-205ENST00000536613 ZNF526Q8TF50 670 aaPredicted RBP24.14■■□□□ 1.45
CACNB1-205ENST00000536613 RUNDC1Q96C34 613 aa24.14■■□□□ 1.45
CACNB1-205ENST00000536613 BRIP1Q9BX63 1249 aa24.14■■□□□ 1.45
CACNB1-205ENST00000536613 RRP7AQ9Y3A4 280 aaKnown RBP24.14■■□□□ 1.45
CACNB1-205ENST00000536613 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
CACNB1-205ENST00000536613 PDE6BP35913 854 aa24.12■■□□□ 1.45
CACNB1-205ENST00000536613 CCDC24Q8N4L8 307 aa24.12■■□□□ 1.45
CACNB1-205ENST00000536613 TTLL6Q8N841 843 aa24.12■■□□□ 1.45
CACNB1-205ENST00000536613 BABAM1Q9NWV8 329 aa24.12■■□□□ 1.45
CACNB1-205ENST00000536613 PDZRN3Q9UPQ7 1066 aa24.12■■□□□ 1.45
CACNB1-205ENST00000536613 NPHP1O15259 732 aa24.11■■□□□ 1.45
CACNB1-205ENST00000536613 NEUROD2Q15784 382 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms