RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 ZBTB1Q9Y2K1 713 aa17.6■□□□□ 0.41
MRPS35-202ENST00000536569 ADCY9O60503 1353 aa17.6■□□□□ 0.41
MRPS35-202ENST00000536569 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
MRPS35-202ENST00000536569 SIPA1L3O60292 1781 aaPredicted RBP17.6■□□□□ 0.41
MRPS35-202ENST00000536569 A0A087WZG4 1122 aa17.59■□□□□ 0.41
MRPS35-202ENST00000536569 A0A0G2JLW4 131 aa17.59■□□□□ 0.41
MRPS35-202ENST00000536569 HTATSF1O43719 755 aaKnown RBP17.59■□□□□ 0.41
MRPS35-202ENST00000536569 USPL1Q5W0Q7 1092 aa17.59■□□□□ 0.41
MRPS35-202ENST00000536569 ZNF496Q96IT1 587 aaPredicted RBP17.59■□□□□ 0.41
MRPS35-202ENST00000536569 FMNL2Q96PY5 1086 aa17.59■□□□□ 0.41
MRPS35-202ENST00000536569 ATP10DQ9P241 1426 aa17.58■□□□□ 0.41
MRPS35-202ENST00000536569 POLRMTO00411 1230 aaKnown RBP17.58■□□□□ 0.4
MRPS35-202ENST00000536569 DPEP1P16444 411 aa17.58■□□□□ 0.4
MRPS35-202ENST00000536569 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
MRPS35-202ENST00000536569 DDR1Q08345 913 aa17.58■□□□□ 0.4
MRPS35-202ENST00000536569 RTF1Q92541 710 aaKnown RBP17.58■□□□□ 0.4
MRPS35-202ENST00000536569 BTBD11A6QL63 1104 aa17.57■□□□□ 0.4
MRPS35-202ENST00000536569 BCS1LQ9Y276 419 aa17.57■□□□□ 0.4
MRPS35-202ENST00000536569 N4BP2Q86UW6 1770 aaPredicted RBP17.57■□□□□ 0.4
MRPS35-202ENST00000536569 KCNA3P22001 575 aa17.56■□□□□ 0.4
MRPS35-202ENST00000536569 PIM2Q9P1W9 311 aa17.56■□□□□ 0.4
MRPS35-202ENST00000536569 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
MRPS35-202ENST00000536569 IL6STP40189 918 aaPredicted RBP17.55■□□□□ 0.4
MRPS35-202ENST00000536569 WWC3Q9ULE0 1092 aa17.55■□□□□ 0.4
MRPS35-202ENST00000536569 BRCA1P38398 1863 aaKnown RBP17.54■□□□□ 0.4
MRPS35-202ENST00000536569 NEFMP07197 916 aa17.54■□□□□ 0.4
MRPS35-202ENST00000536569 NFIXQ14938 502 aa17.54■□□□□ 0.4
MRPS35-202ENST00000536569 BCL2L12Q9HB09 334 aa17.54■□□□□ 0.4
MRPS35-202ENST00000536569 GPBP1L1Q9HC44 474 aaPredicted RBP17.54■□□□□ 0.4
MRPS35-202ENST00000536569 DALRD3Q5D0E6 543 aaKnown RBP17.53■□□□□ 0.4
MRPS35-202ENST00000536569 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
MRPS35-202ENST00000536569 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
MRPS35-202ENST00000536569 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.39
MRPS35-202ENST00000536569 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
MRPS35-202ENST00000536569 SERPINB2P05120 415 aa17.51■□□□□ 0.39
MRPS35-202ENST00000536569 ARHGAP27Q6ZUM4 889 aa17.51■□□□□ 0.39
MRPS35-202ENST00000536569 SNRPA1P09661 255 aaKnown RBP17.5■□□□□ 0.39
MRPS35-202ENST00000536569 RALBP1Q15311 655 aa17.5■□□□□ 0.39
MRPS35-202ENST00000536569 MCM10Q7L590 875 aa17.5■□□□□ 0.39
MRPS35-202ENST00000536569 PDZRN3Q9UPQ7 1066 aa17.5■□□□□ 0.39
MRPS35-202ENST00000536569 KCNQ3O43525 872 aa17.49■□□□□ 0.39
MRPS35-202ENST00000536569 TAF7Q15545 349 aaPredicted RBP17.49■□□□□ 0.39
MRPS35-202ENST00000536569 RGL2O15211 777 aa17.48■□□□□ 0.39
MRPS35-202ENST00000536569 A1BGP04217 495 aa17.48■□□□□ 0.39
MRPS35-202ENST00000536569 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
MRPS35-202ENST00000536569 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
MRPS35-202ENST00000536569 AFDNP55196 1824 aaKnown RBP17.48■□□□□ 0.39
MRPS35-202ENST00000536569 SCN7AQ01118 1682 aa17.48■□□□□ 0.39
MRPS35-202ENST00000536569 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
MRPS35-202ENST00000536569 CHRNA5P30532 468 aa17.47■□□□□ 0.39
MRPS35-202ENST00000536569 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
MRPS35-202ENST00000536569 CARMIL3Q8ND23 1372 aa17.47■□□□□ 0.39
MRPS35-202ENST00000536569 TBC1D9BQ66K14 1250 aa17.46■□□□□ 0.39
MRPS35-202ENST00000536569 CLEC4GQ6UXB4 293 aa17.46■□□□□ 0.39
MRPS35-202ENST00000536569 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.39
MRPS35-202ENST00000536569 CAMTA2O94983 1202 aa17.45■□□□□ 0.38
MRPS35-202ENST00000536569 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
MRPS35-202ENST00000536569 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
MRPS35-202ENST00000536569 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
MRPS35-202ENST00000536569 BRIP1Q9BX63 1249 aa17.45■□□□□ 0.38
MRPS35-202ENST00000536569 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
MRPS35-202ENST00000536569 H0YIN7 160 aa17.44■□□□□ 0.38
MRPS35-202ENST00000536569 PDE6BP35913 854 aa17.44■□□□□ 0.38
MRPS35-202ENST00000536569 BICDL1Q6ZP65 573 aa17.44■□□□□ 0.38
MRPS35-202ENST00000536569 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
MRPS35-202ENST00000536569 TTLL6Q8N841 843 aa17.44■□□□□ 0.38
MRPS35-202ENST00000536569 ZNF526Q8TF50 670 aaPredicted RBP17.44■□□□□ 0.38
MRPS35-202ENST00000536569 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
MRPS35-202ENST00000536569 DLEC1Q9Y238 1755 aa17.43■□□□□ 0.38
MRPS35-202ENST00000536569 C9orf131Q5VYM1 1079 aa17.43■□□□□ 0.38
MRPS35-202ENST00000536569 C2CD5Q86YS7 1000 aa17.43■□□□□ 0.38
MRPS35-202ENST00000536569 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
MRPS35-202ENST00000536569 KIF3CO14782 793 aa17.42■□□□□ 0.38
MRPS35-202ENST00000536569 ZC3H4Q9UPT8 1303 aaKnown RBP17.42■□□□□ 0.38
MRPS35-202ENST00000536569 BCORQ6W2J9 1755 aa17.41■□□□□ 0.38
MRPS35-202ENST00000536569 PRAMEF22A3QJZ6 481 aa17.41■□□□□ 0.38
MRPS35-202ENST00000536569 PRR5LQ6MZQ0 368 aa17.41■□□□□ 0.38
MRPS35-202ENST00000536569 ST5P78524 1137 aa17.4■□□□□ 0.38
MRPS35-202ENST00000536569 CNBD1Q8NA66 436 aa17.4■□□□□ 0.38
MRPS35-202ENST00000536569 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
MRPS35-202ENST00000536569 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
MRPS35-202ENST00000536569 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
MRPS35-202ENST00000536569 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
MRPS35-202ENST00000536569 BABAM1Q9NWV8 329 aa17.39■□□□□ 0.37
MRPS35-202ENST00000536569 RNF181Q9P0P0 153 aa17.39■□□□□ 0.37
MRPS35-202ENST00000536569 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
MRPS35-202ENST00000536569 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
MRPS35-202ENST00000536569 NPHP1O15259 732 aa17.38■□□□□ 0.37
MRPS35-202ENST00000536569 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
MRPS35-202ENST00000536569 LMOD3Q0VAK6 560 aa17.38■□□□□ 0.37
MRPS35-202ENST00000536569 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
MRPS35-202ENST00000536569 MIS18AQ9NYP9 233 aa17.38■□□□□ 0.37
MRPS35-202ENST00000536569 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
MRPS35-202ENST00000536569 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
MRPS35-202ENST00000536569 TOMM70O94826 608 aa17.37■□□□□ 0.37
MRPS35-202ENST00000536569 HSPA6P17066 643 aa17.37■□□□□ 0.37
MRPS35-202ENST00000536569 LMNB1P20700 586 aa17.37■□□□□ 0.37
MRPS35-202ENST00000536569 PIP4K2AP48426 406 aaPredicted RBP17.37■□□□□ 0.37
MRPS35-202ENST00000536569 CNKSR1Q969H4 720 aa17.37■□□□□ 0.37
MRPS35-202ENST00000536569 ANKRD31Q8N7Z5 1873 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms