RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 TMEM63CQ9P1W3 806 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
PTPN21-202ENST00000536337 MYD88Q99836 296 aa15.41■□□□□ 0.06
PTPN21-202ENST00000536337 CPLX1O14810 134 aa15.41■□□□□ 0.06
PTPN21-202ENST00000536337 NRDCO43847 1150 aa15.41■□□□□ 0.06
PTPN21-202ENST00000536337 AK2P54819 239 aa15.41■□□□□ 0.06
PTPN21-202ENST00000536337 TNMDQ9H2S6 317 aa15.41■□□□□ 0.06
PTPN21-202ENST00000536337 GADD45BO75293 160 aaPredicted RBP15.41■□□□□ 0.06
PTPN21-202ENST00000536337 STK11IPQ8N1F8 1099 aa15.41■□□□□ 0.06
PTPN21-202ENST00000536337 TNRQ92752 1358 aa15.41■□□□□ 0.06
PTPN21-202ENST00000536337 SDF4Q9BRK5 362 aa15.41■□□□□ 0.06
PTPN21-202ENST00000536337 LRRC2Q9BYS8 371 aa15.41■□□□□ 0.06
PTPN21-202ENST00000536337 TTC12Q9H892 705 aaPredicted RBP15.41■□□□□ 0.06
PTPN21-202ENST00000536337 PRR36Q9H6K5 1346 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 DNM1Q05193 864 aaKnown RBP15.4■□□□□ 0.06
PTPN21-202ENST00000536337 FAM173BQ6P4H8 233 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 SYTL4Q96C24 671 aaPredicted RBP15.4■□□□□ 0.06
PTPN21-202ENST00000536337 EFCAB6Q5THR3 1501 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 KCNQ3O43525 872 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 CCDC192P0DO97 292 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 KCNA6P17658 529 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 GUCY1B3Q02153 619 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 CREBRFQ8IUR6 639 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 KLHDC4Q8TBB5 520 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 SPATA32Q96LK8 384 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 KIF2CQ99661 725 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 PDCP20941 246 aa15.4■□□□□ 0.06
PTPN21-202ENST00000536337 NPHP1O15259 732 aa15.39■□□□□ 0.05
PTPN21-202ENST00000536337 ADCY5O95622 1261 aa15.39■□□□□ 0.05
PTPN21-202ENST00000536337 RNF17Q9BXT8 1623 aaKnown RBP15.39■□□□□ 0.05
PTPN21-202ENST00000536337 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
PTPN21-202ENST00000536337 IL17REQ8NFR9 667 aa15.39■□□□□ 0.05
PTPN21-202ENST00000536337 USP44Q9H0E7 712 aa15.39■□□□□ 0.05
PTPN21-202ENST00000536337 KIF3AQ9Y496 699 aa15.39■□□□□ 0.05
PTPN21-202ENST00000536337 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
PTPN21-202ENST00000536337 RRP9O43818 475 aaKnown RBP15.38■□□□□ 0.05
PTPN21-202ENST00000536337 HOXC9P31274 260 aa15.38■□□□□ 0.05
PTPN21-202ENST00000536337 CCDC183Q5T5S1 534 aa15.38■□□□□ 0.05
PTPN21-202ENST00000536337 CCDC73Q6ZRK6 1079 aa15.38■□□□□ 0.05
PTPN21-202ENST00000536337 FLT4P35916 1363 aa15.38■□□□□ 0.05
PTPN21-202ENST00000536337 PIK3R4Q99570 1358 aa15.38■□□□□ 0.05
PTPN21-202ENST00000536337 GPT2Q8TD30 523 aa15.37■□□□□ 0.05
PTPN21-202ENST00000536337 NUP62CLQ9H1M0 184 aa15.37■□□□□ 0.05
PTPN21-202ENST00000536337 ZSCAN22P10073 491 aaPredicted RBP15.37■□□□□ 0.05
PTPN21-202ENST00000536337 SOS1Q07889 1333 aaPredicted RBP15.37■□□□□ 0.05
PTPN21-202ENST00000536337 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
PTPN21-202ENST00000536337 NDUFB9Q9Y6M9 179 aa15.37■□□□□ 0.05
PTPN21-202ENST00000536337 SYT1P21579 422 aa15.37■□□□□ 0.05
PTPN21-202ENST00000536337 EVA1CP58658 441 aa15.37■□□□□ 0.05
PTPN21-202ENST00000536337 UBE3BQ7Z3V4 1068 aa15.37■□□□□ 0.05
PTPN21-202ENST00000536337 NSFL1CQ9UNZ2 370 aaKnown RBP15.37■□□□□ 0.05
PTPN21-202ENST00000536337 LETM1O95202 739 aaPredicted RBP15.36■□□□□ 0.05
PTPN21-202ENST00000536337 TATP17735 454 aaPredicted RBP15.36■□□□□ 0.05
PTPN21-202ENST00000536337 ANKLE2Q86XL3 938 aa15.36■□□□□ 0.05
PTPN21-202ENST00000536337 ME1P48163 572 aa15.36■□□□□ 0.05
PTPN21-202ENST00000536337 CCT2P78371 535 aaKnown RBP15.36■□□□□ 0.05
PTPN21-202ENST00000536337 FILIP1Q7Z7B0 1213 aa15.36■□□□□ 0.05
PTPN21-202ENST00000536337 C17orf53Q8N3J3 647 aaPredicted RBP15.36■□□□□ 0.05
PTPN21-202ENST00000536337 RBM8AQ9Y5S9 174 aaKnown RBP15.36■□□□□ 0.05
PTPN21-202ENST00000536337 HIP1O00291 1037 aa15.35■□□□□ 0.05
PTPN21-202ENST00000536337 ATF3P18847 181 aa15.35■□□□□ 0.05
PTPN21-202ENST00000536337 CABP4P57796 275 aa15.35■□□□□ 0.05
PTPN21-202ENST00000536337 ZSCAN31Q96LW9 406 aaPredicted RBP15.35■□□□□ 0.05
PTPN21-202ENST00000536337 ATP2B1P20020 1258 aa15.35■□□□□ 0.05
PTPN21-202ENST00000536337 BRPF1P55201 1214 aaPredicted RBP15.35■□□□□ 0.05
PTPN21-202ENST00000536337 ERBB4Q15303 1308 aa15.35■□□□□ 0.05
PTPN21-202ENST00000536337 CHRNA2Q15822 529 aa15.35■□□□□ 0.05
PTPN21-202ENST00000536337 DDX46Q7L014 1031 aaKnown RBP15.35■□□□□ 0.05
PTPN21-202ENST00000536337 RAB11FIP4Q86YS3 637 aa15.35■□□□□ 0.05
PTPN21-202ENST00000536337 ANAPC15P60006 121 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 STRN4Q9NRL3 753 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 SHROOM2Q13796 1616 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 MAP3K11Q16584 847 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 PRDM10Q9NQV6 1147 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 A0A087WZG4 1122 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 NBPF6Q5VWK0 638 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 COPS6Q7L5N1 327 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 NBPF4Q96M43 638 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 SNRKQ9NRH2 765 aa15.34■□□□□ 0.05
PTPN21-202ENST00000536337 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.05
PTPN21-202ENST00000536337 TPD52L1Q16890 204 aaPredicted RBP15.33■□□□□ 0.05
PTPN21-202ENST00000536337 EVI5LQ96CN4 794 aa15.33■□□□□ 0.05
PTPN21-202ENST00000536337 ZKSCAN5Q9Y2L8 839 aa15.33■□□□□ 0.05
PTPN21-202ENST00000536337 TTC21AQ8NDW8 1320 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 LAMC1P11047 1609 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 KINO60870 393 aaKnown RBP15.33■□□□□ 0.04
PTPN21-202ENST00000536337 RALYLQ86SE5 291 aaKnown RBP15.33■□□□□ 0.04
PTPN21-202ENST00000536337 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 ANKRD24Q8TF21 1146 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 ABCC3O15438 1527 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 TULP4Q9NRJ4 1543 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 UBE2HP62256 183 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 LARP1Q6PKG0 1096 aaKnown RBP15.33■□□□□ 0.04
PTPN21-202ENST00000536337 PKNOX2Q96KN3 472 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 FAM227BQ96M60 508 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 SNX14Q9Y5W7 946 aa15.33■□□□□ 0.04
PTPN21-202ENST00000536337 NMIQ13287 307 aaPredicted RBP15.32■□□□□ 0.04
PTPN21-202ENST00000536337 SYNE3Q6ZMZ3 975 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms