RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 KCNQ3O43525 872 aa19.03■□□□□ 0.64
RTN3P1-201ENST00000536295 STARD3NLO95772 234 aa19.03■□□□□ 0.64
RTN3P1-201ENST00000536295 TGFB2P61812 414 aa19.03■□□□□ 0.64
RTN3P1-201ENST00000536295 DDR1Q08345 913 aa19.03■□□□□ 0.64
RTN3P1-201ENST00000536295 SIPA1L3O60292 1781 aaPredicted RBP19.03■□□□□ 0.64
RTN3P1-201ENST00000536295 HEG1Q9ULI3 1381 aa19.03■□□□□ 0.64
RTN3P1-201ENST00000536295 DCTN1Q14203 1278 aa19.02■□□□□ 0.64
RTN3P1-201ENST00000536295 FMNL2Q96PY5 1086 aa19.02■□□□□ 0.64
RTN3P1-201ENST00000536295 KIF13BQ9NQT8 1826 aa19.02■□□□□ 0.63
RTN3P1-201ENST00000536295 N4BP2Q86UW6 1770 aaPredicted RBP19.01■□□□□ 0.63
RTN3P1-201ENST00000536295 DPEP1P16444 411 aa19.01■□□□□ 0.63
RTN3P1-201ENST00000536295 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
RTN3P1-201ENST00000536295 NARFQ9UHQ1 456 aa19.01■□□□□ 0.63
RTN3P1-201ENST00000536295 ZNF330Q9Y3S2 320 aaPredicted RBP19.01■□□□□ 0.63
RTN3P1-201ENST00000536295 POLRMTO00411 1230 aaKnown RBP19■□□□□ 0.63
RTN3P1-201ENST00000536295 NEFMP07197 916 aa19■□□□□ 0.63
RTN3P1-201ENST00000536295 TEX13AQ9BXU3 409 aaPredicted RBP19■□□□□ 0.63
RTN3P1-201ENST00000536295 BCS1LQ9Y276 419 aa19■□□□□ 0.63
RTN3P1-201ENST00000536295 KIAA1551Q9HCM1 1747 aa19■□□□□ 0.63
RTN3P1-201ENST00000536295 TM4SF1P30408 202 aa18.99■□□□□ 0.63
RTN3P1-201ENST00000536295 NFIXQ14938 502 aa18.98■□□□□ 0.63
RTN3P1-201ENST00000536295 EIF5P55010 431 aaKnown RBP18.97■□□□□ 0.63
RTN3P1-201ENST00000536295 BCL2L12Q9HB09 334 aa18.97■□□□□ 0.63
RTN3P1-201ENST00000536295 A0A087WZG4 1122 aa18.96■□□□□ 0.63
RTN3P1-201ENST00000536295 HTATSF1O43719 755 aaKnown RBP18.96■□□□□ 0.63
RTN3P1-201ENST00000536295 A1BGP04217 495 aa18.96■□□□□ 0.63
RTN3P1-201ENST00000536295 RALBP1Q15311 655 aa18.96■□□□□ 0.63
RTN3P1-201ENST00000536295 BICDL1Q6ZP65 573 aa18.96■□□□□ 0.63
RTN3P1-201ENST00000536295 ATP10DQ9P241 1426 aa18.96■□□□□ 0.63
RTN3P1-201ENST00000536295 PRAMEF22A3QJZ6 481 aa18.95■□□□□ 0.62
RTN3P1-201ENST00000536295 CHRNA5P30532 468 aa18.95■□□□□ 0.62
RTN3P1-201ENST00000536295 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
RTN3P1-201ENST00000536295 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
RTN3P1-201ENST00000536295 USP16Q9Y5T5 823 aa18.95■□□□□ 0.62
RTN3P1-201ENST00000536295 GIGYF1O75420 1035 aaPredicted RBP18.94■□□□□ 0.62
RTN3P1-201ENST00000536295 KCNA3P22001 575 aa18.94■□□□□ 0.62
RTN3P1-201ENST00000536295 IL6STP40189 918 aaPredicted RBP18.94■□□□□ 0.62
RTN3P1-201ENST00000536295 PIP4K2AP48426 406 aaPredicted RBP18.94■□□□□ 0.62
RTN3P1-201ENST00000536295 PLEKHF1Q96S99 279 aa18.94■□□□□ 0.62
RTN3P1-201ENST00000536295 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
RTN3P1-201ENST00000536295 MAPK8IP3Q9UPT6 1336 aa18.94■□□□□ 0.62
RTN3P1-201ENST00000536295 SERPINB2P05120 415 aa18.93■□□□□ 0.62
RTN3P1-201ENST00000536295 TAF7Q15545 349 aaPredicted RBP18.93■□□□□ 0.62
RTN3P1-201ENST00000536295 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
RTN3P1-201ENST00000536295 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
RTN3P1-201ENST00000536295 PIM2Q9P1W9 311 aa18.93■□□□□ 0.62
RTN3P1-201ENST00000536295 SNRPA1P09661 255 aaKnown RBP18.92■□□□□ 0.62
RTN3P1-201ENST00000536295 NFE2L2Q16236 605 aa18.92■□□□□ 0.62
RTN3P1-201ENST00000536295 PNNQ9H307 717 aaKnown RBP18.92■□□□□ 0.62
RTN3P1-201ENST00000536295 C1QTNF8P60827 252 aa18.91■□□□□ 0.62
RTN3P1-201ENST00000536295 DALRD3Q5D0E6 543 aaKnown RBP18.91■□□□□ 0.62
RTN3P1-201ENST00000536295 TBC1D9BQ66K14 1250 aa18.91■□□□□ 0.62
RTN3P1-201ENST00000536295 THUMPD2Q9BTF0 503 aaKnown RBP18.91■□□□□ 0.62
RTN3P1-201ENST00000536295 ADCY9O60503 1353 aa18.91■□□□□ 0.62
RTN3P1-201ENST00000536295 AFDNP55196 1824 aaKnown RBP18.9■□□□□ 0.62
RTN3P1-201ENST00000536295 BRCA1P38398 1863 aaKnown RBP18.9■□□□□ 0.62
RTN3P1-201ENST00000536295 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
RTN3P1-201ENST00000536295 DZIP3Q86Y13 1208 aaKnown RBP18.89■□□□□ 0.61
RTN3P1-201ENST00000536295 GPBP1L1Q9HC44 474 aaPredicted RBP18.89■□□□□ 0.61
RTN3P1-201ENST00000536295 MYBBP1AQ9BQG0 1328 aaKnown RBP18.89■□□□□ 0.61
RTN3P1-201ENST00000536295 SCN7AQ01118 1682 aa18.89■□□□□ 0.61
RTN3P1-201ENST00000536295 CAMTA2O94983 1202 aa18.88■□□□□ 0.61
RTN3P1-201ENST00000536295 CARMIL3Q8ND23 1372 aa18.88■□□□□ 0.61
RTN3P1-201ENST00000536295 CCDC24Q8N4L8 307 aa18.87■□□□□ 0.61
RTN3P1-201ENST00000536295 PNISRQ8TF01 805 aaKnown RBP18.87■□□□□ 0.61
RTN3P1-201ENST00000536295 NRXN2Q9P2S2 1712 aa18.87■□□□□ 0.61
RTN3P1-201ENST00000536295 C2CD5Q86YS7 1000 aa18.86■□□□□ 0.61
RTN3P1-201ENST00000536295 NBPF26B4DH59 902 aa18.85■□□□□ 0.61
RTN3P1-201ENST00000536295 NPHP1O15259 732 aa18.85■□□□□ 0.61
RTN3P1-201ENST00000536295 RIPK4P57078 832 aa18.85■□□□□ 0.61
RTN3P1-201ENST00000536295 NBPF10Q6P3W6 841 aaKnown RBP18.85■□□□□ 0.61
RTN3P1-201ENST00000536295 NBPF15Q8N660 670 aa18.85■□□□□ 0.61
RTN3P1-201ENST00000536295 SETDB2Q96T68 719 aa18.85■□□□□ 0.61
RTN3P1-201ENST00000536295 ARFGEF1Q9Y6D6 1849 aa18.84■□□□□ 0.61
RTN3P1-201ENST00000536295 SENP3-EIF4A1A0A087X0R7 540 aa18.84■□□□□ 0.61
RTN3P1-201ENST00000536295 CCDC146Q8IYE0 955 aa18.84■□□□□ 0.61
RTN3P1-201ENST00000536295 H0YIN7 160 aa18.83■□□□□ 0.6
RTN3P1-201ENST00000536295 PRR5LQ6MZQ0 368 aa18.83■□□□□ 0.6
RTN3P1-201ENST00000536295 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.6
RTN3P1-201ENST00000536295 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
RTN3P1-201ENST00000536295 WDR43Q15061 677 aaKnown RBP eCLIP18.82■□□□□ 0.6
RTN3P1-201ENST00000536295 C9orf131Q5VYM1 1079 aa18.82■□□□□ 0.6
RTN3P1-201ENST00000536295 NGEFQ8N5V2 710 aa18.82■□□□□ 0.6
RTN3P1-201ENST00000536295 CNBD1Q8NA66 436 aa18.82■□□□□ 0.6
RTN3P1-201ENST00000536295 RRP7AQ9Y3A4 280 aaKnown RBP18.82■□□□□ 0.6
RTN3P1-201ENST00000536295 BCORQ6W2J9 1755 aa18.82■□□□□ 0.6
RTN3P1-201ENST00000536295 TMPOP42166 694 aaKnown RBP18.81■□□□□ 0.6
RTN3P1-201ENST00000536295 NEUROD2Q15784 382 aa18.81■□□□□ 0.6
RTN3P1-201ENST00000536295 TTLL6Q8N841 843 aa18.81■□□□□ 0.6
RTN3P1-201ENST00000536295 ZNF622Q969S3 477 aaKnown RBP eCLIP18.81■□□□□ 0.6
RTN3P1-201ENST00000536295 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
RTN3P1-201ENST00000536295 ZNF652Q9Y2D9 606 aa18.81■□□□□ 0.6
RTN3P1-201ENST00000536295 PDE6BP35913 854 aa18.8■□□□□ 0.6
RTN3P1-201ENST00000536295 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
RTN3P1-201ENST00000536295 LAMB4A4D0S4 1761 aa18.8■□□□□ 0.6
RTN3P1-201ENST00000536295 ST5P78524 1137 aa18.79■□□□□ 0.6
RTN3P1-201ENST00000536295 RASSF7Q02833 373 aa18.79■□□□□ 0.6
RTN3P1-201ENST00000536295 CLEC4GQ6UXB4 293 aa18.79■□□□□ 0.6
RTN3P1-201ENST00000536295 NBPF5PQ86XG9 351 aaPredicted RBP18.79■□□□□ 0.6
RTN3P1-201ENST00000536295 RNF181Q9P0P0 153 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms