RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 NRXN2Q9P2S2 1712 aa15.03■□□□□ -0
LMO3-213ENST00000536172 ZC3H4Q9UPT8 1303 aaKnown RBP15.03■□□□□ -0
LMO3-213ENST00000536172 RNMTO43148 476 aaKnown RBP15.03■□□□□ -0
LMO3-213ENST00000536172 CYP19A1P11511 503 aaPredicted RBP15.03■□□□□ -0
LMO3-213ENST00000536172 DNAJC10Q8IXB1 793 aa15.03■□□□□ -0
LMO3-213ENST00000536172 NMRK2Q9NPI5 230 aa15.03■□□□□ -0
LMO3-213ENST00000536172 NARFQ9UHQ1 456 aa15.03■□□□□ -0
LMO3-213ENST00000536172 COL15A1P39059 1388 aa15.02■□□□□ -0
LMO3-213ENST00000536172 DIAPH1O60610 1272 aaKnown RBP15.02■□□□□ -0
LMO3-213ENST00000536172 FSTL1Q12841 308 aa15.02■□□□□ -0
LMO3-213ENST00000536172 USPL1Q5W0Q7 1092 aa15.02■□□□□ -0
LMO3-213ENST00000536172 LGR6Q9HBX8 967 aa15.02■□□□□ -0
LMO3-213ENST00000536172 WDR90Q96KV7 1748 aa15.02□□□□□ -0.01
LMO3-213ENST00000536172 KCPQ6ZWJ8 1503 aa15.02□□□□□ -0.01
LMO3-213ENST00000536172 RNF181Q9P0P0 153 aa15.01□□□□□ -0.01
LMO3-213ENST00000536172 HMOX1P09601 288 aa15□□□□□ -0.01
LMO3-213ENST00000536172 CHRNA5P30532 468 aa15□□□□□ -0.01
LMO3-213ENST00000536172 DNAJC5GQ8N7S2 189 aa15□□□□□ -0.01
LMO3-213ENST00000536172 KIF7Q2M1P5 1343 aa14.99□□□□□ -0.01
LMO3-213ENST00000536172 A0A087WZG4 1122 aa14.99□□□□□ -0.01
LMO3-213ENST00000536172 STARD3NLO95772 234 aa14.99□□□□□ -0.01
LMO3-213ENST00000536172 SLC39A6Q13433 755 aa14.99□□□□□ -0.01
LMO3-213ENST00000536172 NFIXQ14938 502 aa14.99□□□□□ -0.01
LMO3-213ENST00000536172 MTHFSDQ2M296 383 aaKnown RBP14.99□□□□□ -0.01
LMO3-213ENST00000536172 TTC5Q8N0Z6 440 aa14.99□□□□□ -0.01
LMO3-213ENST00000536172 TEX13AQ9BXU3 409 aaPredicted RBP14.99□□□□□ -0.01
LMO3-213ENST00000536172 PER1O15534 1290 aaPredicted RBP14.98□□□□□ -0.01
LMO3-213ENST00000536172 PDZRN3Q9UPQ7 1066 aa14.98□□□□□ -0.01
LMO3-213ENST00000536172 ZBTB1Q9Y2K1 713 aa14.98□□□□□ -0.01
LMO3-213ENST00000536172 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
LMO3-213ENST00000536172 CCDC88AQ3V6T2 1871 aa14.97□□□□□ -0.01
LMO3-213ENST00000536172 SERPINB2P05120 415 aa14.97□□□□□ -0.01
LMO3-213ENST00000536172 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
LMO3-213ENST00000536172 H0YIN7 160 aa14.96□□□□□ -0.01
LMO3-213ENST00000536172 LMNB1P20700 586 aa14.96□□□□□ -0.01
LMO3-213ENST00000536172 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
LMO3-213ENST00000536172 GAS2L2Q8NHY3 880 aa14.96□□□□□ -0.01
LMO3-213ENST00000536172 EIF5P55010 431 aaKnown RBP14.95□□□□□ -0.02
LMO3-213ENST00000536172 TEFQ10587 303 aa14.95□□□□□ -0.02
LMO3-213ENST00000536172 SMC1BQ8NDV3 1235 aa14.95□□□□□ -0.02
LMO3-213ENST00000536172 BCL2L12Q9HB09 334 aa14.95□□□□□ -0.02
LMO3-213ENST00000536172 RRAGCQ9HB90 399 aa14.95□□□□□ -0.02
LMO3-213ENST00000536172 SCN7AQ01118 1682 aa14.94□□□□□ -0.02
LMO3-213ENST00000536172 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
LMO3-213ENST00000536172 CANXP27824 592 aaKnown RBP14.94□□□□□ -0.02
LMO3-213ENST00000536172 CC2D1BQ5T0F9 858 aaKnown RBP14.94□□□□□ -0.02
LMO3-213ENST00000536172 ZNF790Q6PG37 636 aa14.94□□□□□ -0.02
LMO3-213ENST00000536172 KLRG1Q96E93 195 aa14.94□□□□□ -0.02
LMO3-213ENST00000536172 TIAM2Q8IVF5 1701 aa14.94□□□□□ -0.02
LMO3-213ENST00000536172 DICER1Q9UPY3 1922 aaKnown RBP14.94□□□□□ -0.02
LMO3-213ENST00000536172 GLTPD2A6NH11 291 aa14.93□□□□□ -0.02
LMO3-213ENST00000536172 VEGFAP15692 232 aaPredicted RBP14.93□□□□□ -0.02
LMO3-213ENST00000536172 PDE6BP35913 854 aa14.93□□□□□ -0.02
LMO3-213ENST00000536172 NPM2Q86SE8 214 aaKnown RBP14.93□□□□□ -0.02
LMO3-213ENST00000536172 C2CD5Q86YS7 1000 aa14.93□□□□□ -0.02
LMO3-213ENST00000536172 HEG1Q9ULI3 1381 aa14.93□□□□□ -0.02
LMO3-213ENST00000536172 COL3A1P02461 1466 aaPredicted RBP14.93□□□□□ -0.02
LMO3-213ENST00000536172 IL6STP40189 918 aaPredicted RBP14.92□□□□□ -0.02
LMO3-213ENST00000536172 JMYQ8N9B5 988 aa14.92□□□□□ -0.02
LMO3-213ENST00000536172 ZNF496Q96IT1 587 aaPredicted RBP14.92□□□□□ -0.02
LMO3-213ENST00000536172 BRIP1Q9BX63 1249 aa14.92□□□□□ -0.02
LMO3-213ENST00000536172 ANKRD31Q8N7Z5 1873 aa14.92□□□□□ -0.02
LMO3-213ENST00000536172 CARMIL3Q8ND23 1372 aa14.91□□□□□ -0.02
LMO3-213ENST00000536172 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
LMO3-213ENST00000536172 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
LMO3-213ENST00000536172 RASSF7Q02833 373 aa14.91□□□□□ -0.02
LMO3-213ENST00000536172 FMNL2Q96PY5 1086 aa14.91□□□□□ -0.02
LMO3-213ENST00000536172 FER1L6Q2WGJ9 1857 aa14.91□□□□□ -0.02
LMO3-213ENST00000536172 DPY19L2Q6NUT2 758 aa14.9□□□□□ -0.02
LMO3-213ENST00000536172 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
LMO3-213ENST00000536172 CEMIPQ8WUJ3 1361 aa14.89□□□□□ -0.03
LMO3-213ENST00000536172 TBC1D9BQ66K14 1250 aa14.89□□□□□ -0.03
LMO3-213ENST00000536172 BICDL1Q6ZP65 573 aa14.89□□□□□ -0.03
LMO3-213ENST00000536172 CFAP53Q96M91 514 aa14.89□□□□□ -0.03
LMO3-213ENST00000536172 BCORQ6W2J9 1755 aa14.88□□□□□ -0.03
LMO3-213ENST00000536172 ARFGEF2Q9Y6D5 1785 aa14.88□□□□□ -0.03
LMO3-213ENST00000536172 SOGA3Q5TF21 947 aa14.88□□□□□ -0.03
LMO3-213ENST00000536172 SETDB2Q96T68 719 aa14.88□□□□□ -0.03
LMO3-213ENST00000536172 NFKBIEO00221 500 aa14.87□□□□□ -0.03
LMO3-213ENST00000536172 PRR5LQ6MZQ0 368 aa14.87□□□□□ -0.03
LMO3-213ENST00000536172 CNKSR1Q969H4 720 aa14.87□□□□□ -0.03
LMO3-213ENST00000536172 ZNF622Q969S3 477 aaKnown RBP eCLIP14.87□□□□□ -0.03
LMO3-213ENST00000536172 TBC1D2BQ9UPU7 963 aa14.87□□□□□ -0.03
LMO3-213ENST00000536172 ZNF330Q9Y3S2 320 aaPredicted RBP14.87□□□□□ -0.03
LMO3-213ENST00000536172 LTBP3Q9NS15 1303 aa14.87□□□□□ -0.03
LMO3-213ENST00000536172 COL11A2P13942 1736 aaPredicted RBP14.86□□□□□ -0.03
LMO3-213ENST00000536172 BTBD11A6QL63 1104 aa14.86□□□□□ -0.03
LMO3-213ENST00000536172 NPHP1O15259 732 aa14.86□□□□□ -0.03
LMO3-213ENST00000536172 ST5P78524 1137 aa14.86□□□□□ -0.03
LMO3-213ENST00000536172 CLEC4GQ6UXB4 293 aa14.86□□□□□ -0.03
LMO3-213ENST00000536172 CNBD1Q8NA66 436 aa14.86□□□□□ -0.03
LMO3-213ENST00000536172 NUDCQ9Y266 331 aa14.86□□□□□ -0.03
LMO3-213ENST00000536172 CACNA1SQ13698 1873 aa14.85□□□□□ -0.03
LMO3-213ENST00000536172 RGL2O15211 777 aa14.85□□□□□ -0.03
LMO3-213ENST00000536172 PRELPP51888 382 aa14.85□□□□□ -0.03
LMO3-213ENST00000536172 ERFEQ4G0M1 354 aa14.85□□□□□ -0.03
LMO3-213ENST00000536172 STYK1Q6J9G0 422 aa14.85□□□□□ -0.03
LMO3-213ENST00000536172 ZNF652Q9Y2D9 606 aa14.85□□□□□ -0.03
LMO3-213ENST00000536172 C21orf2O43822 256 aa14.84□□□□□ -0.03
LMO3-213ENST00000536172 CAMTA2O94983 1202 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms