RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.77■□□□□ 0.27
DDB1-207ENST00000535967 CCDC184Q52MB2 194 aa16.77■□□□□ 0.27
DDB1-207ENST00000535967 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.27
DDB1-207ENST00000535967 PHACTR3Q96KR7 559 aa16.77■□□□□ 0.27
DDB1-207ENST00000535967 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
DDB1-207ENST00000535967 PLCD3Q8N3E9 789 aa16.76■□□□□ 0.27
DDB1-207ENST00000535967 GNAT3A8MTJ3 354 aa16.75■□□□□ 0.27
DDB1-207ENST00000535967 ITPK1Q13572 414 aa16.75■□□□□ 0.27
DDB1-207ENST00000535967 SMARCC1Q92922 1105 aaPredicted RBP16.75■□□□□ 0.27
DDB1-207ENST00000535967 GPBP1L1Q9HC44 474 aaPredicted RBP16.75■□□□□ 0.27
DDB1-207ENST00000535967 CREBZFQ9NS37 354 aa16.75■□□□□ 0.27
DDB1-207ENST00000535967 ADAMTS8Q9UP79 889 aa16.75■□□□□ 0.27
DDB1-207ENST00000535967 KIAA1551Q9HCM1 1747 aa16.74■□□□□ 0.27
DDB1-207ENST00000535967 KDM3BQ7LBC6 1761 aa16.74■□□□□ 0.27
DDB1-207ENST00000535967 TMOD3Q9NYL9 352 aa16.74■□□□□ 0.27
DDB1-207ENST00000535967 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
DDB1-207ENST00000535967 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
DDB1-207ENST00000535967 LOC102724428A0A0B4J2F2 783 aa16.73■□□□□ 0.27
DDB1-207ENST00000535967 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
DDB1-207ENST00000535967 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
DDB1-207ENST00000535967 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.272e-7■■■■□ 26.1
DDB1-207ENST00000535967 SIK1P57059 783 aa16.73■□□□□ 0.27
DDB1-207ENST00000535967 IFFO2Q5TF58 517 aa16.73■□□□□ 0.27
DDB1-207ENST00000535967 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
DDB1-207ENST00000535967 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
DDB1-207ENST00000535967 RNMTO43148 476 aaKnown RBP16.72■□□□□ 0.27
DDB1-207ENST00000535967 HTATSF1O43719 755 aaKnown RBP16.72■□□□□ 0.27
DDB1-207ENST00000535967 NFE2L2Q16236 605 aa16.72■□□□□ 0.27
DDB1-207ENST00000535967 PIP4P2Q8N4L2 257 aa16.72■□□□□ 0.27
DDB1-207ENST00000535967 N4BP2Q86UW6 1770 aaPredicted RBP16.72■□□□□ 0.27
DDB1-207ENST00000535967 KIF13BQ9NQT8 1826 aa16.71■□□□□ 0.27
DDB1-207ENST00000535967 SSFA2P28290 1259 aa16.71■□□□□ 0.27
DDB1-207ENST00000535967 CHADLQ6NUI6 762 aa16.71■□□□□ 0.27
DDB1-207ENST00000535967 TJP1Q07157 1748 aa16.71■□□□□ 0.26
DDB1-207ENST00000535967 GNPATO15228 680 aa16.7■□□□□ 0.26
DDB1-207ENST00000535967 CABP4P57796 275 aa16.7■□□□□ 0.26
DDB1-207ENST00000535967 IFNLR1Q8IU57 520 aaPredicted RBP16.7■□□□□ 0.26
DDB1-207ENST00000535967 SLC52A2Q9HAB3 445 aa16.7■□□□□ 0.26
DDB1-207ENST00000535967 HSPA6P17066 643 aa16.7■□□□□ 0.26
DDB1-207ENST00000535967 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
DDB1-207ENST00000535967 RTF1Q92541 710 aaKnown RBP16.7■□□□□ 0.26
DDB1-207ENST00000535967 PXDNLA1KZ92 1463 aa16.69■□□□□ 0.26
DDB1-207ENST00000535967 LMOD3Q0VAK6 560 aa16.69■□□□□ 0.26
DDB1-207ENST00000535967 LGR6Q9HBX8 967 aa16.69■□□□□ 0.26
DDB1-207ENST00000535967 ATG3Q9NT62 314 aa16.69■□□□□ 0.26
DDB1-207ENST00000535967 LAMB4A4D0S4 1761 aa16.68■□□□□ 0.26
DDB1-207ENST00000535967 KIF3CO14782 793 aa16.68■□□□□ 0.26
DDB1-207ENST00000535967 MMP10P09238 476 aa16.68■□□□□ 0.26
DDB1-207ENST00000535967 ATP6V1AP38606 617 aa16.68■□□□□ 0.26
DDB1-207ENST00000535967 TMPOP42166 694 aaKnown RBP16.68■□□□□ 0.26
DDB1-207ENST00000535967 SLC4A9Q96Q91 983 aa16.68■□□□□ 0.26
DDB1-207ENST00000535967 KCPQ6ZWJ8 1503 aa16.67■□□□□ 0.26
DDB1-207ENST00000535967 MYH14Q7Z406 1995 aaKnown RBP16.67■□□□□ 0.26
DDB1-207ENST00000535967 TEFQ10587 303 aa16.67■□□□□ 0.26
DDB1-207ENST00000535967 IL17REQ8NFR9 667 aa16.67■□□□□ 0.26
DDB1-207ENST00000535967 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
DDB1-207ENST00000535967 HMGB2P26583 209 aaKnown RBP16.66■□□□□ 0.26
DDB1-207ENST00000535967 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
DDB1-207ENST00000535967 RIPK4P57078 832 aa16.65■□□□□ 0.26
DDB1-207ENST00000535967 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
DDB1-207ENST00000535967 C4AP0C0L4 1744 aa16.65■□□□□ 0.26
DDB1-207ENST00000535967 MCM10Q7L590 875 aa16.64■□□□□ 0.25
DDB1-207ENST00000535967 C10orf71Q711Q0 1435 aa16.64■□□□□ 0.25
DDB1-207ENST00000535967 A0A0G2JLW4 131 aa16.62■□□□□ 0.25
DDB1-207ENST00000535967 APAF1O14727 1248 aa16.62■□□□□ 0.25
DDB1-207ENST00000535967 FAM9BQ8IZU0 186 aa16.62■□□□□ 0.25
DDB1-207ENST00000535967 DCTN1Q14203 1278 aa16.61■□□□□ 0.25
DDB1-207ENST00000535967 ARHGEF1Q92888 912 aaKnown RBP16.61■□□□□ 0.25
DDB1-207ENST00000535967 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
DDB1-207ENST00000535967 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
DDB1-207ENST00000535967 GYS1P13807 737 aa16.6■□□□□ 0.25
DDB1-207ENST00000535967 NEUROD2Q15784 382 aa16.6■□□□□ 0.25
DDB1-207ENST00000535967 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
DDB1-207ENST00000535967 RTCBQ9Y3I0 505 aaKnown RBP16.6■□□□□ 0.25
DDB1-207ENST00000535967 DPEP1P16444 411 aa16.59■□□□□ 0.25
DDB1-207ENST00000535967 TRAPPC3LQ5T215 181 aa16.59■□□□□ 0.25
DDB1-207ENST00000535967 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
DDB1-207ENST00000535967 TRIM35Q9UPQ4 493 aa16.59■□□□□ 0.25
DDB1-207ENST00000535967 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
DDB1-207ENST00000535967 MNX1P50219 401 aaPredicted RBP16.58■□□□□ 0.24
DDB1-207ENST00000535967 TGFB2P61812 414 aa16.58■□□□□ 0.24
DDB1-207ENST00000535967 TAF7Q15545 349 aaPredicted RBP16.58■□□□□ 0.24
DDB1-207ENST00000535967 CCDC27Q2M243 656 aa16.58■□□□□ 0.24
DDB1-207ENST00000535967 ZNF790Q6PG37 636 aa16.58■□□□□ 0.24
DDB1-207ENST00000535967 NMRK2Q9NPI5 230 aa16.58■□□□□ 0.24
DDB1-207ENST00000535967 BABAM1Q9NWV8 329 aa16.58■□□□□ 0.24
DDB1-207ENST00000535967 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
DDB1-207ENST00000535967 CNTNAP4Q9C0A0 1308 aa16.57■□□□□ 0.24
DDB1-207ENST00000535967 CALD1Q05682 793 aaKnown RBP16.57■□□□□ 0.24
DDB1-207ENST00000535967 NLGN1Q8N2Q7 840 aa16.57■□□□□ 0.24
DDB1-207ENST00000535967 RPS6KA4O75676 772 aa16.56■□□□□ 0.24
DDB1-207ENST00000535967 KCNA3P22001 575 aa16.56■□□□□ 0.24
DDB1-207ENST00000535967 SLC39A6Q13433 755 aa16.56■□□□□ 0.24
DDB1-207ENST00000535967 RC3H1Q5TC82 1133 aaKnown RBP16.56■□□□□ 0.24
DDB1-207ENST00000535967 ARHGAP27Q6ZUM4 889 aa16.56■□□□□ 0.24
DDB1-207ENST00000535967 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
DDB1-207ENST00000535967 THUMPD2Q9BTF0 503 aaKnown RBP16.56■□□□□ 0.24
DDB1-207ENST00000535967 HEG1Q9ULI3 1381 aa16.56■□□□□ 0.24
DDB1-207ENST00000535967 PTCD1O75127 700 aaKnown RBP16.55■□□□□ 0.24
DDB1-207ENST00000535967 SRP68Q9UHB9 627 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms