RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 LGR6Q9HBX8 967 aa22.69■■□□□ 1.22
CHPF-203ENST00000535926 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
CHPF-203ENST00000535926 SRGAP3O43295 1099 aa22.68■■□□□ 1.22
CHPF-203ENST00000535926 RAB11FIP3O75154 756 aa22.68■■□□□ 1.22
CHPF-203ENST00000535926 PXDNLA1KZ92 1463 aa22.68■■□□□ 1.22
CHPF-203ENST00000535926 ARHGAP23Q9P227 1491 aa22.68■■□□□ 1.22
CHPF-203ENST00000535926 KCNQ3O43525 872 aa22.67■■□□□ 1.22
CHPF-203ENST00000535926 GDPD2Q9HCC8 539 aa22.67■■□□□ 1.22
CHPF-203ENST00000535926 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.67■■□□□ 1.22
CHPF-203ENST00000535926 SLIT1O75093 1534 aa22.66■■□□□ 1.22
CHPF-203ENST00000535926 MBD3O95983 291 aa22.66■■□□□ 1.22
CHPF-203ENST00000535926 EIF4A1P60842 406 aaKnown RBP22.66■■□□□ 1.22
CHPF-203ENST00000535926 C14orf37Q86TY3 774 aa22.66■■□□□ 1.22
CHPF-203ENST00000535926 CHPF2Q9P2E5 772 aa22.66■■□□□ 1.22
CHPF-203ENST00000535926 ANXA1P04083 346 aa22.65■■□□□ 1.22
CHPF-203ENST00000535926 MSNP26038 577 aaKnown RBP22.65■■□□□ 1.22
CHPF-203ENST00000535926 BEND3Q5T5X7 828 aa22.65■■□□□ 1.22
CHPF-203ENST00000535926 UBE2Q2Q8WVN8 375 aa22.65■■□□□ 1.22
CHPF-203ENST00000535926 CEMIPQ8WUJ3 1361 aa22.65■■□□□ 1.22
CHPF-203ENST00000535926 PI4KAP2A4QPH2 592 aa22.65■■□□□ 1.22
CHPF-203ENST00000535926 SGSM2O43147 1006 aa22.65■■□□□ 1.22
CHPF-203ENST00000535926 NBPF6Q5VWK0 638 aa22.65■■□□□ 1.22
CHPF-203ENST00000535926 PI4KAP1Q8N8J0 262 aa22.65■■□□□ 1.22
CHPF-203ENST00000535926 NBPF4Q96M43 638 aa22.65■■□□□ 1.22
CHPF-203ENST00000535926 GADD45BO75293 160 aaPredicted RBP22.64■■□□□ 1.22
CHPF-203ENST00000535926 HS1BP3Q53T59 392 aa22.64■■□□□ 1.22
CHPF-203ENST00000535926 RNF214Q8ND24 703 aa22.64■■□□□ 1.21
CHPF-203ENST00000535926 NOL7Q9UMY1 257 aaKnown RBP22.64■■□□□ 1.21
CHPF-203ENST00000535926 RASEFQ8IZ41 740 aa22.63■■□□□ 1.21
CHPF-203ENST00000535926 KIF1BPQ96EK5 621 aa22.63■■□□□ 1.21
CHPF-203ENST00000535926 SNX14Q9Y5W7 946 aa22.63■■□□□ 1.21
CHPF-203ENST00000535926 EPB41L2O43491 1005 aaKnown RBP22.63■■□□□ 1.21
CHPF-203ENST00000535926 LARP6Q9BRS8 491 aaKnown RBP22.63■■□□□ 1.21
CHPF-203ENST00000535926 LSG1Q9H089 658 aaKnown RBP22.63■■□□□ 1.21
CHPF-203ENST00000535926 MARF1Q9Y4F3 1742 aaKnown RBP22.63■■□□□ 1.21
CHPF-203ENST00000535926 OFD1O75665 1012 aa22.62■■□□□ 1.21
CHPF-203ENST00000535926 PLEKHG5O94827 1062 aa22.62■■□□□ 1.21
CHPF-203ENST00000535926 ANKARQ7Z5J8 1434 aa22.62■■□□□ 1.21
CHPF-203ENST00000535926 THEMISQ8N1K5 641 aaPredicted RBP22.62■■□□□ 1.21
CHPF-203ENST00000535926 DNAAF4Q8WXU2 420 aa22.62■■□□□ 1.21
CHPF-203ENST00000535926 RAD50Q92878 1312 aa22.62■■□□□ 1.21
CHPF-203ENST00000535926 KIAA1211Q6ZU35 1233 aa22.62■■□□□ 1.21
CHPF-203ENST00000535926 USP48Q86UV5 1035 aa22.61■■□□□ 1.21
CHPF-203ENST00000535926 CACNA1FO60840 1977 aa22.61■■□□□ 1.21
CHPF-203ENST00000535926 IP6K1Q92551 441 aa22.61■■□□□ 1.21
CHPF-203ENST00000535926 TTC14Q96N46 770 aa22.61■■□□□ 1.21
CHPF-203ENST00000535926 CWC27Q6UX04 472 aaKnown RBP22.6■■□□□ 1.21
CHPF-203ENST00000535926 SPG7Q9UQ90 795 aa22.6■■□□□ 1.21
CHPF-203ENST00000535926 WDR33Q9C0J8 1336 aaKnown RBP22.59■■□□□ 1.21
CHPF-203ENST00000535926 RPAP1Q9BWH6 1393 aaPredicted RBP22.59■■□□□ 1.21
CHPF-203ENST00000535926 AK2P54819 239 aa22.59■■□□□ 1.21
CHPF-203ENST00000535926 CNTROBQ8N137 903 aa22.59■■□□□ 1.21
CHPF-203ENST00000535926 RBM33Q96EV2 1170 aaKnown RBP22.58■■□□□ 1.21
CHPF-203ENST00000535926 CPA1P15085 419 aa22.58■■□□□ 1.2
CHPF-203ENST00000535926 RUFY3Q7L099 469 aa22.58■■□□□ 1.2
CHPF-203ENST00000535926 ADCY9O60503 1353 aa22.57■■□□□ 1.2
CHPF-203ENST00000535926 N4BP2Q86UW6 1770 aaPredicted RBP22.57■■□□□ 1.2
CHPF-203ENST00000535926 HSP90AA2PQ14568 343 aaPredicted RBP22.57■■□□□ 1.2
CHPF-203ENST00000535926 MPRIPQ6WCQ1 1025 aa22.57■■□□□ 1.2
CHPF-203ENST00000535926 LRRC59Q96AG4 307 aaKnown RBP22.57■■□□□ 1.2
CHPF-203ENST00000535926 PHF8Q9UPP1 1060 aa22.57■■□□□ 1.2
CHPF-203ENST00000535926 ZBTB7CA1YPR0 619 aa22.56■■□□□ 1.2
CHPF-203ENST00000535926 ZNF500O60304 480 aaPredicted RBP22.56■■□□□ 1.2
CHPF-203ENST00000535926 HOXB7P09629 217 aa22.56■■□□□ 1.2
CHPF-203ENST00000535926 TSPY26PQ9H489 355 aa22.56■■□□□ 1.2
CHPF-203ENST00000535926 BTBD11A6QL63 1104 aa22.56■■□□□ 1.2
CHPF-203ENST00000535926 TPM2P07951 284 aa22.56■■□□□ 1.2
CHPF-203ENST00000535926 XPCQ01831 940 aaPredicted RBP22.56■■□□□ 1.2
CHPF-203ENST00000535926 DTNBO60941 627 aa22.55■■□□□ 1.2
CHPF-203ENST00000535926 ZKSCAN5Q9Y2L8 839 aa22.55■■□□□ 1.2
CHPF-203ENST00000535926 USP42Q9H9J4 1324 aaKnown RBP22.54■■□□□ 1.2
CHPF-203ENST00000535926 CNPY2Q9Y2B0 182 aa22.54■■□□□ 1.2
CHPF-203ENST00000535926 RRP9O43818 475 aaKnown RBP22.54■■□□□ 1.2
CHPF-203ENST00000535926 OS9Q13438 667 aaPredicted RBP22.54■■□□□ 1.2
CHPF-203ENST00000535926 LIMCH1Q9UPQ0 1083 aa22.54■■□□□ 1.2
CHPF-203ENST00000535926 PTH1RQ03431 593 aa22.53■■□□□ 1.2
CHPF-203ENST00000535926 TEFQ10587 303 aa22.53■■□□□ 1.2
CHPF-203ENST00000535926 PROSER3Q2NL68 480 aa22.53■■□□□ 1.2
CHPF-203ENST00000535926 SYAP1Q96A49 352 aaPredicted RBP22.53■■□□□ 1.2
CHPF-203ENST00000535926 LARGE1O95461 756 aa22.53■■□□□ 1.2
CHPF-203ENST00000535926 SYT1P21579 422 aa22.53■■□□□ 1.2
CHPF-203ENST00000535926 HSP90AB4PQ58FF6 505 aa22.53■■□□□ 1.2
CHPF-203ENST00000535926 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.53■■□□□ 1.2
CHPF-203ENST00000535926 PA2G4Q9UQ80 394 aaKnown RBP22.53■■□□□ 1.2
CHPF-203ENST00000535926 GLRX3O76003 335 aaKnown RBP22.52■■□□□ 1.2
CHPF-203ENST00000535926 ZNF530Q6P9A1 599 aaPredicted RBP22.52■■□□□ 1.2
CHPF-203ENST00000535926 MED1Q15648 1581 aaPredicted RBP22.52■■□□□ 1.2
CHPF-203ENST00000535926 TTC41PQ6P2S7 1318 aa22.52■■□□□ 1.2
CHPF-203ENST00000535926 ZSCAN22P10073 491 aaPredicted RBP22.52■■□□□ 1.2
CHPF-203ENST00000535926 CASTP20810 708 aaKnown RBP22.52■■□□□ 1.2
CHPF-203ENST00000535926 TPRNQ4KMQ1 711 aa22.52■■□□□ 1.2
CHPF-203ENST00000535926 MAP3K2Q9Y2U5 619 aa22.52■■□□□ 1.2
CHPF-203ENST00000535926 MTX1Q13505 466 aa22.51■■□□□ 1.19
CHPF-203ENST00000535926 ADCK5Q3MIX3 580 aa22.51■■□□□ 1.19
CHPF-203ENST00000535926 AKAP4Q5JQC9 854 aa22.51■■□□□ 1.19
CHPF-203ENST00000535926 TMEM87AQ8NBN3 555 aa22.51■■□□□ 1.19
CHPF-203ENST00000535926 HYPKQ9NX55 129 aa22.51■■□□□ 1.19
CHPF-203ENST00000535926 PRAMEF22A3QJZ6 481 aa22.51■■□□□ 1.19
CHPF-203ENST00000535926 STX6O43752 255 aa22.51■■□□□ 1.19
CHPF-203ENST00000535926 CLASRPQ8N2M8 674 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms