RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 TJP1Q07157 1748 aa12.35□□□□□ -0.43
LRTOMT-211ENST00000535883 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
LRTOMT-211ENST00000535883 CNTNAP1P78357 1384 aa12.34□□□□□ -0.43
LRTOMT-211ENST00000535883 VEGFBP49765 207 aa12.34□□□□□ -0.43
LRTOMT-211ENST00000535883 CABP4P57796 275 aa12.34□□□□□ -0.43
LRTOMT-211ENST00000535883 AEBP1Q8IUX7 1158 aa12.34□□□□□ -0.43
LRTOMT-211ENST00000535883 DNAJC10Q8IXB1 793 aa12.34□□□□□ -0.43
LRTOMT-211ENST00000535883 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
LRTOMT-211ENST00000535883 PASKQ96RG2 1323 aa12.34□□□□□ -0.43
LRTOMT-211ENST00000535883 TIAM2Q8IVF5 1701 aa12.34□□□□□ -0.43
LRTOMT-211ENST00000535883 NRXN2Q9P2S2 1712 aa12.34□□□□□ -0.43
LRTOMT-211ENST00000535883 DDNO94850 711 aaPredicted RBP12.33□□□□□ -0.44
LRTOMT-211ENST00000535883 LBX1P52954 281 aa12.33□□□□□ -0.44
LRTOMT-211ENST00000535883 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
LRTOMT-211ENST00000535883 TTLL6Q8N841 843 aa12.33□□□□□ -0.44
LRTOMT-211ENST00000535883 WBP1LQ9NX94 342 aa12.33□□□□□ -0.44
LRTOMT-211ENST00000535883 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
LRTOMT-211ENST00000535883 SERPINB2P05120 415 aa12.32□□□□□ -0.44
LRTOMT-211ENST00000535883 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
LRTOMT-211ENST00000535883 C2CD5Q86YS7 1000 aa12.32□□□□□ -0.44
LRTOMT-211ENST00000535883 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
LRTOMT-211ENST00000535883 DLEC1Q9Y238 1755 aa12.31□□□□□ -0.44
LRTOMT-211ENST00000535883 CYP19A1P11511 503 aaPredicted RBP12.31□□□□□ -0.44
LRTOMT-211ENST00000535883 ABHD8Q96I13 439 aa12.31□□□□□ -0.44
LRTOMT-211ENST00000535883 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
LRTOMT-211ENST00000535883 C21orf2O43822 256 aa12.3□□□□□ -0.44
LRTOMT-211ENST00000535883 HSPA8P11142 646 aaKnown RBP12.3□□□□□ -0.44
LRTOMT-211ENST00000535883 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
LRTOMT-211ENST00000535883 CTCFP49711 727 aaPredicted RBP12.3□□□□□ -0.44
LRTOMT-211ENST00000535883 MTHFSP49914 203 aa12.3□□□□□ -0.44
LRTOMT-211ENST00000535883 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
LRTOMT-211ENST00000535883 ZBTB1Q9Y2K1 713 aa12.3□□□□□ -0.44
LRTOMT-211ENST00000535883 ZPR1O75312 459 aa12.29□□□□□ -0.44
LRTOMT-211ENST00000535883 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
LRTOMT-211ENST00000535883 ERFEQ4G0M1 354 aa12.29□□□□□ -0.44
LRTOMT-211ENST00000535883 PLEKHO1Q53GL0 409 aaPredicted RBP12.29□□□□□ -0.44
LRTOMT-211ENST00000535883 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
LRTOMT-211ENST00000535883 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
LRTOMT-211ENST00000535883 ANKRD31Q8N7Z5 1873 aa12.28□□□□□ -0.44
LRTOMT-211ENST00000535883 HSP90AB1P08238 724 aaKnown RBP12.28□□□□□ -0.44
LRTOMT-211ENST00000535883 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
LRTOMT-211ENST00000535883 FER1L6Q2WGJ9 1857 aa12.27□□□□□ -0.44
LRTOMT-211ENST00000535883 RGS19P49795 217 aa12.27□□□□□ -0.45
LRTOMT-211ENST00000535883 TAF1DQ9H5J8 278 aaPredicted RBP12.27□□□□□ -0.45
LRTOMT-211ENST00000535883 DICER1Q9UPY3 1922 aaKnown RBP12.27□□□□□ -0.45
LRTOMT-211ENST00000535883 H0YIN7 160 aa12.26□□□□□ -0.45
LRTOMT-211ENST00000535883 FMR1Q06787 632 aaKnown RBP eCLIP12.26□□□□□ -0.45
LRTOMT-211ENST00000535883 TBC1D9BQ66K14 1250 aa12.26□□□□□ -0.45
LRTOMT-211ENST00000535883 BICDL1Q6ZP65 573 aa12.26□□□□□ -0.45
LRTOMT-211ENST00000535883 COL15A1P39059 1388 aa12.26□□□□□ -0.45
LRTOMT-211ENST00000535883 COL11A2P13942 1736 aaPredicted RBP12.25□□□□□ -0.45
LRTOMT-211ENST00000535883 TMEM88BA6NKF7 163 aa12.25□□□□□ -0.45
LRTOMT-211ENST00000535883 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
LRTOMT-211ENST00000535883 ZNF622Q969S3 477 aaKnown RBP eCLIP12.25□□□□□ -0.45
LRTOMT-211ENST00000535883 SLX4Q8IY92 1834 aa12.25□□□□□ -0.45
LRTOMT-211ENST00000535883 AMOTQ4VCS5 1084 aa12.24□□□□□ -0.45
LRTOMT-211ENST00000535883 PRR5LQ6MZQ0 368 aa12.24□□□□□ -0.45
LRTOMT-211ENST00000535883 OLFM4Q6UX06 510 aa12.24□□□□□ -0.45
LRTOMT-211ENST00000535883 LDHDQ86WU2 507 aa12.24□□□□□ -0.45
LRTOMT-211ENST00000535883 C7orf43Q8WVR3 580 aa12.24□□□□□ -0.45
LRTOMT-211ENST00000535883 L3MBTL3Q96JM7 780 aaPredicted RBP12.24□□□□□ -0.45
LRTOMT-211ENST00000535883 LTBP3Q9NS15 1303 aa12.24□□□□□ -0.45
LRTOMT-211ENST00000535883 ZNF541Q9H0D2 1346 aa12.23□□□□□ -0.45
LRTOMT-211ENST00000535883 RASSF10A6NK89 507 aa12.23□□□□□ -0.45
LRTOMT-211ENST00000535883 EIF5P55010 431 aaKnown RBP12.23□□□□□ -0.45
LRTOMT-211ENST00000535883 SLC52A2Q9HAB3 445 aa12.23□□□□□ -0.45
LRTOMT-211ENST00000535883 ADAMTSL1Q8N6G6 1762 aa12.23□□□□□ -0.45
LRTOMT-211ENST00000535883 CANXP27824 592 aaKnown RBP12.22□□□□□ -0.45
LRTOMT-211ENST00000535883 MAP1SQ66K74 1059 aaPredicted RBP12.22□□□□□ -0.45
LRTOMT-211ENST00000535883 SULT6B1Q6IMI4 303 aa12.22□□□□□ -0.45
LRTOMT-211ENST00000535883 AIDAQ96BJ3 306 aa12.22□□□□□ -0.45
LRTOMT-211ENST00000535883 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
LRTOMT-211ENST00000535883 TAOK3Q9H2K8 898 aa12.22□□□□□ -0.45
LRTOMT-211ENST00000535883 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
LRTOMT-211ENST00000535883 SCN11AQ9UI33 1791 aa12.22□□□□□ -0.45
LRTOMT-211ENST00000535883 WDR33Q9C0J8 1336 aaKnown RBP12.21□□□□□ -0.45
LRTOMT-211ENST00000535883 CCDC85CA6NKD9 419 aa12.21□□□□□ -0.45
LRTOMT-211ENST00000535883 MLLT1Q03111 559 aaPredicted RBP12.21□□□□□ -0.45
LRTOMT-211ENST00000535883 DEFB115Q30KQ5 88 aa12.21□□□□□ -0.45
LRTOMT-211ENST00000535883 C1orf141Q5JVX7 400 aa12.21□□□□□ -0.45
LRTOMT-211ENST00000535883 RNMTO43148 476 aaKnown RBP12.2□□□□□ -0.46
LRTOMT-211ENST00000535883 SRGNP10124 158 aa12.2□□□□□ -0.46
LRTOMT-211ENST00000535883 IL13P35225 146 aa12.2□□□□□ -0.46
LRTOMT-211ENST00000535883 EAPPQ56P03 285 aaPredicted RBP12.2□□□□□ -0.46
LRTOMT-211ENST00000535883 PRPF40BQ6NWY9 871 aaKnown RBP12.2□□□□□ -0.46
LRTOMT-211ENST00000535883 TSKSQ9UJT2 592 aa12.2□□□□□ -0.46
LRTOMT-211ENST00000535883 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
LRTOMT-211ENST00000535883 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
LRTOMT-211ENST00000535883 CNTROBQ8N137 903 aa12.19□□□□□ -0.46
LRTOMT-211ENST00000535883 MRC1P22897 1456 aa12.19□□□□□ -0.46
LRTOMT-211ENST00000535883 PDE6BP35913 854 aa12.18□□□□□ -0.46
LRTOMT-211ENST00000535883 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
LRTOMT-211ENST00000535883 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
LRTOMT-211ENST00000535883 SLC51AQ86UW1 340 aa12.18□□□□□ -0.46
LRTOMT-211ENST00000535883 ZNF277Q9NRM2 450 aaPredicted RBP12.18□□□□□ -0.46
LRTOMT-211ENST00000535883 SCN4AP35499 1836 aa12.18□□□□□ -0.46
LRTOMT-211ENST00000535883 RNF123Q5XPI4 1314 aa12.17□□□□□ -0.46
LRTOMT-211ENST00000535883 IQCA1LA6NCM1 817 aa12.17□□□□□ -0.46
LRTOMT-211ENST00000535883 CAMTA2O94983 1202 aa12.17□□□□□ -0.46
LRTOMT-211ENST00000535883 EPHX2P34913 555 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms