RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 U2SURPO15042 1029 aaKnown RBP14.48□□□□□ -0.09
CCDC60-202ENST00000535685 GRIN3BO60391 1043 aa14.48□□□□□ -0.09
CCDC60-202ENST00000535685 CRKLP46109 303 aaKnown RBP14.48□□□□□ -0.09
CCDC60-202ENST00000535685 VSIG10Q8N0Z9 540 aa14.48□□□□□ -0.09
CCDC60-202ENST00000535685 RSPH6AQ9H0K4 717 aa14.48□□□□□ -0.09
CCDC60-202ENST00000535685 GNAT3A8MTJ3 354 aa14.47□□□□□ -0.09
CCDC60-202ENST00000535685 CEMIPQ8WUJ3 1361 aa14.47□□□□□ -0.09
CCDC60-202ENST00000535685 FCHSD2O94868 740 aa14.46□□□□□ -0.09
CCDC60-202ENST00000535685 GYS1P13807 737 aa14.46□□□□□ -0.09
CCDC60-202ENST00000535685 RFC4P35249 363 aa14.46□□□□□ -0.09
CCDC60-202ENST00000535685 INTS5Q6P9B9 1019 aaKnown RBP14.46□□□□□ -0.09
CCDC60-202ENST00000535685 IL17REQ8NFR9 667 aa14.46□□□□□ -0.09
CCDC60-202ENST00000535685 MMP10P09238 476 aa14.45□□□□□ -0.1
CCDC60-202ENST00000535685 CYP19A1P11511 503 aaPredicted RBP14.45□□□□□ -0.1
CCDC60-202ENST00000535685 YBX3P16989 372 aaKnown RBP eCLIP14.45□□□□□ -0.1
CCDC60-202ENST00000535685 SLC39A6Q13433 755 aa14.45□□□□□ -0.1
CCDC60-202ENST00000535685 DNAJC10Q8IXB1 793 aa14.45□□□□□ -0.1
CCDC60-202ENST00000535685 KIAA1551Q9HCM1 1747 aa14.45□□□□□ -0.1
CCDC60-202ENST00000535685 PRKAR2BP31323 418 aa14.44□□□□□ -0.1
CCDC60-202ENST00000535685 CNGB1Q14028 1251 aaPredicted RBP14.44□□□□□ -0.1
CCDC60-202ENST00000535685 PHACTR3Q96KR7 559 aa14.44□□□□□ -0.1
CCDC60-202ENST00000535685 CCDC87Q9NVE4 849 aa14.44□□□□□ -0.1
CCDC60-202ENST00000535685 BRCA1P38398 1863 aaKnown RBP14.44□□□□□ -0.1
CCDC60-202ENST00000535685 SOS1Q07889 1333 aaPredicted RBP14.43□□□□□ -0.1
CCDC60-202ENST00000535685 USP42Q9H9J4 1324 aaKnown RBP14.43□□□□□ -0.1
CCDC60-202ENST00000535685 ZNF784Q8NCA9 323 aaPredicted RBP14.43□□□□□ -0.1
CCDC60-202ENST00000535685 C10orf71Q711Q0 1435 aa14.42□□□□□ -0.1
CCDC60-202ENST00000535685 HTATSF1O43719 755 aaKnown RBP14.42□□□□□ -0.1
CCDC60-202ENST00000535685 U2AF1L5P0DN76 240 aaPredicted RBP14.42□□□□□ -0.1
CCDC60-202ENST00000535685 TGFB2P61812 414 aa14.42□□□□□ -0.1
CCDC60-202ENST00000535685 U2AF1Q01081 240 aaKnown RBP eCLIP14.42□□□□□ -0.1
CCDC60-202ENST00000535685 TEFQ10587 303 aa14.42□□□□□ -0.1
CCDC60-202ENST00000535685 ZNF790Q6PG37 636 aa14.42□□□□□ -0.1
CCDC60-202ENST00000535685 TEX13AQ9BXU3 409 aaPredicted RBP14.42□□□□□ -0.1
CCDC60-202ENST00000535685 DLG5Q8TDM6 1919 aa14.41□□□□□ -0.1
CCDC60-202ENST00000535685 TTC5Q8N0Z6 440 aa14.41□□□□□ -0.1
CCDC60-202ENST00000535685 CIZ1Q9ULV3 898 aaPredicted RBP14.41□□□□□ -0.1
CCDC60-202ENST00000535685 N4BP2Q86UW6 1770 aaPredicted RBP14.41□□□□□ -0.1
CCDC60-202ENST00000535685 PXDNLA1KZ92 1463 aa14.4□□□□□ -0.1
CCDC60-202ENST00000535685 HEG1Q9ULI3 1381 aa14.4□□□□□ -0.1
CCDC60-202ENST00000535685 STARD3NLO95772 234 aa14.4□□□□□ -0.1
CCDC60-202ENST00000535685 TM4SF1P30408 202 aa14.4□□□□□ -0.1
CCDC60-202ENST00000535685 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
CCDC60-202ENST00000535685 PARP3Q9Y6F1 533 aa14.4□□□□□ -0.1
CCDC60-202ENST00000535685 AFDNP55196 1824 aaKnown RBP14.39□□□□□ -0.11
CCDC60-202ENST00000535685 ARFGEF1Q9Y6D6 1849 aa14.39□□□□□ -0.11
CCDC60-202ENST00000535685 ZNF496Q96IT1 587 aaPredicted RBP14.39□□□□□ -0.11
CCDC60-202ENST00000535685 SRP68Q9UHB9 627 aaKnown RBP14.39□□□□□ -0.11
CCDC60-202ENST00000535685 NARFQ9UHQ1 456 aa14.39□□□□□ -0.11
CCDC60-202ENST00000535685 NRXN2Q9P2S2 1712 aa14.38□□□□□ -0.11
CCDC60-202ENST00000535685 COL15A1P39059 1388 aa14.38□□□□□ -0.11
CCDC60-202ENST00000535685 ZPR1O75312 459 aa14.38□□□□□ -0.11
CCDC60-202ENST00000535685 EIF5P55010 431 aaKnown RBP14.38□□□□□ -0.11
CCDC60-202ENST00000535685 RALBP1Q15311 655 aa14.38□□□□□ -0.11
CCDC60-202ENST00000535685 SPDYE1Q8NFV5 336 aaPredicted RBP14.38□□□□□ -0.11
CCDC60-202ENST00000535685 FMNL2Q96PY5 1086 aa14.38□□□□□ -0.11
CCDC60-202ENST00000535685 ZBTB1Q9Y2K1 713 aa14.38□□□□□ -0.11
CCDC60-202ENST00000535685 RGL2O15211 777 aa14.37□□□□□ -0.11
CCDC60-202ENST00000535685 A0A087WZG4 1122 aa14.36□□□□□ -0.11
CCDC60-202ENST00000535685 POLRMTO00411 1230 aaKnown RBP14.36□□□□□ -0.11
CCDC60-202ENST00000535685 DDR1Q08345 913 aa14.36□□□□□ -0.11
CCDC60-202ENST00000535685 USPL1Q5W0Q7 1092 aa14.36□□□□□ -0.11
CCDC60-202ENST00000535685 RTF1Q92541 710 aaKnown RBP14.36□□□□□ -0.11
CCDC60-202ENST00000535685 BTBD11A6QL63 1104 aa14.35□□□□□ -0.11
CCDC60-202ENST00000535685 IL6STP40189 918 aaPredicted RBP14.35□□□□□ -0.11
CCDC60-202ENST00000535685 PLEKHF1Q96S99 279 aa14.35□□□□□ -0.11
CCDC60-202ENST00000535685 PNNQ9H307 717 aaKnown RBP14.35□□□□□ -0.11
CCDC60-202ENST00000535685 ADCY9O60503 1353 aa14.34□□□□□ -0.11
CCDC60-202ENST00000535685 KCNA3P22001 575 aa14.34□□□□□ -0.11
CCDC60-202ENST00000535685 BCL2L12Q9HB09 334 aa14.34□□□□□ -0.11
CCDC60-202ENST00000535685 SCN7AQ01118 1682 aa14.33□□□□□ -0.11
CCDC60-202ENST00000535685 A0A0G2JLW4 131 aa14.33□□□□□ -0.12
CCDC60-202ENST00000535685 KCNQ3O43525 872 aa14.33□□□□□ -0.12
CCDC60-202ENST00000535685 NEFMP07197 916 aa14.33□□□□□ -0.12
CCDC60-202ENST00000535685 DPEP1P16444 411 aa14.33□□□□□ -0.12
CCDC60-202ENST00000535685 NFIXQ14938 502 aa14.33□□□□□ -0.12
CCDC60-202ENST00000535685 MCM10Q7L590 875 aa14.33□□□□□ -0.12
CCDC60-202ENST00000535685 BBXQ8WY36 941 aaPredicted RBP14.33□□□□□ -0.12
CCDC60-202ENST00000535685 KDM3BQ7LBC6 1761 aa14.32□□□□□ -0.12
CCDC60-202ENST00000535685 DLEC1Q9Y238 1755 aa14.32□□□□□ -0.12
CCDC60-202ENST00000535685 CANXP27824 592 aaKnown RBP14.32□□□□□ -0.12
CCDC60-202ENST00000535685 TAF7Q15545 349 aaPredicted RBP14.32□□□□□ -0.12
CCDC60-202ENST00000535685 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.32□□□□□ -0.12
CCDC60-202ENST00000535685 SNRPA1P09661 255 aaKnown RBP14.31□□□□□ -0.12
CCDC60-202ENST00000535685 BCORQ6W2J9 1755 aa14.31□□□□□ -0.12
CCDC60-202ENST00000535685 SBF1O95248 1867 aa14.3□□□□□ -0.12
CCDC60-202ENST00000535685 DCTN1Q14203 1278 aa14.3□□□□□ -0.12
CCDC60-202ENST00000535685 NFE2L2Q16236 605 aa14.3□□□□□ -0.12
CCDC60-202ENST00000535685 PNISRQ8TF01 805 aaKnown RBP14.3□□□□□ -0.12
CCDC60-202ENST00000535685 PIM2Q9P1W9 311 aa14.3□□□□□ -0.12
CCDC60-202ENST00000535685 USP16Q9Y5T5 823 aa14.3□□□□□ -0.12
CCDC60-202ENST00000535685 LAMB4A4D0S4 1761 aa14.29□□□□□ -0.12
CCDC60-202ENST00000535685 A1BGP04217 495 aa14.29□□□□□ -0.12
CCDC60-202ENST00000535685 SERPINB2P05120 415 aa14.29□□□□□ -0.12
CCDC60-202ENST00000535685 DDX10Q13206 875 aaKnown RBP14.29□□□□□ -0.12
CCDC60-202ENST00000535685 CLEC11AQ9Y240 323 aa14.29□□□□□ -0.12
CCDC60-202ENST00000535685 BCS1LQ9Y276 419 aa14.29□□□□□ -0.12
CCDC60-202ENST00000535685 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
CCDC60-202ENST00000535685 CAMTA2O94983 1202 aa14.28□□□□□ -0.12
CCDC60-202ENST00000535685 ANKRD31Q8N7Z5 1873 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms