RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ZPR1O75312 459 aa15.2■□□□□ 0.02
CLSTN3-206ENST00000535668 EIF5P55010 431 aaKnown RBP15.2■□□□□ 0.02
CLSTN3-206ENST00000535668 TEX13AQ9BXU3 409 aaPredicted RBP15.2■□□□□ 0.02
CLSTN3-206ENST00000535668 BCL2L12Q9HB09 334 aa15.2■□□□□ 0.02
CLSTN3-206ENST00000535668 PDZRN3Q9UPQ7 1066 aa15.2■□□□□ 0.02
CLSTN3-206ENST00000535668 RGL2O15211 777 aa15.19■□□□□ 0.02
CLSTN3-206ENST00000535668 ARHGAP27Q6ZUM4 889 aa15.19■□□□□ 0.02
CLSTN3-206ENST00000535668 CCER1Q8TC90 406 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-206ENST00000535668 COL15A1P39059 1388 aa15.19■□□□□ 0.02
CLSTN3-206ENST00000535668 SBF1O95248 1867 aa15.18■□□□□ 0.02
CLSTN3-206ENST00000535668 VIRMAQ69YN4 1812 aaKnown RBP15.18■□□□□ 0.02
CLSTN3-206ENST00000535668 FSTL1Q12841 308 aa15.18■□□□□ 0.02
CLSTN3-206ENST00000535668 NFIXQ14938 502 aa15.18■□□□□ 0.02
CLSTN3-206ENST00000535668 C9orf131Q5VYM1 1079 aa15.18■□□□□ 0.02
CLSTN3-206ENST00000535668 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
CLSTN3-206ENST00000535668 DLEC1Q9Y238 1755 aa15.17■□□□□ 0.02
CLSTN3-206ENST00000535668 A0A087WZG4 1122 aa15.17■□□□□ 0.02
CLSTN3-206ENST00000535668 STARD3NLO95772 234 aa15.17■□□□□ 0.02
CLSTN3-206ENST00000535668 ZBTB1Q9Y2K1 713 aa15.17■□□□□ 0.02
CLSTN3-206ENST00000535668 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
CLSTN3-206ENST00000535668 AFDNP55196 1824 aaKnown RBP15.16■□□□□ 0.02
CLSTN3-206ENST00000535668 SLC39A6Q13433 755 aa15.16■□□□□ 0.02
CLSTN3-206ENST00000535668 ZNF790Q6PG37 636 aa15.16■□□□□ 0.02
CLSTN3-206ENST00000535668 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
CLSTN3-206ENST00000535668 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
CLSTN3-206ENST00000535668 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
CLSTN3-206ENST00000535668 KDM2BQ8NHM5 1336 aa15.16■□□□□ 0.02
CLSTN3-206ENST00000535668 HEG1Q9ULI3 1381 aa15.15■□□□□ 0.02
CLSTN3-206ENST00000535668 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
CLSTN3-206ENST00000535668 HMOX1P09601 288 aa15.15■□□□□ 0.02
CLSTN3-206ENST00000535668 IL6STP40189 918 aaPredicted RBP15.15■□□□□ 0.02
CLSTN3-206ENST00000535668 NMRK2Q9NPI5 230 aa15.15■□□□□ 0.02
CLSTN3-206ENST00000535668 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
CLSTN3-206ENST00000535668 ZNF496Q96IT1 587 aaPredicted RBP15.14■□□□□ 0.01
CLSTN3-206ENST00000535668 SERPINB2P05120 415 aa15.13■□□□□ 0.01
CLSTN3-206ENST00000535668 CHRNA5P30532 468 aa15.13■□□□□ 0.01
CLSTN3-206ENST00000535668 JMYQ8N9B5 988 aa15.13■□□□□ 0.01
CLSTN3-206ENST00000535668 BRIP1Q9BX63 1249 aa15.13■□□□□ 0.01
CLSTN3-206ENST00000535668 TNRC6CQ9HCJ0 1690 aaKnown RBP15.12■□□□□ 0.01
CLSTN3-206ENST00000535668 LMNB1P20700 586 aa15.12■□□□□ 0.01
CLSTN3-206ENST00000535668 TTLL6Q8N841 843 aa15.12■□□□□ 0.01
CLSTN3-206ENST00000535668 PCNTO95613 3336 aa15.12■□□□□ 0.01
CLSTN3-206ENST00000535668 TTC5Q8N0Z6 440 aa15.11■□□□□ 0.01
CLSTN3-206ENST00000535668 LTBP3Q9NS15 1303 aa15.11■□□□□ 0.01
CLSTN3-206ENST00000535668 SCN7AQ01118 1682 aa15.1■□□□□ 0.01
CLSTN3-206ENST00000535668 GLTPD2A6NH11 291 aa15.1■□□□□ 0.01
CLSTN3-206ENST00000535668 HTATSF1O43719 755 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-206ENST00000535668 TEFQ10587 303 aa15.1■□□□□ 0.01
CLSTN3-206ENST00000535668 CC2D1BQ5T0F9 858 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-206ENST00000535668 CLEC4GQ6UXB4 293 aa15.1■□□□□ 0.01
CLSTN3-206ENST00000535668 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
CLSTN3-206ENST00000535668 RNF181Q9P0P0 153 aa15.1■□□□□ 0.01
CLSTN3-206ENST00000535668 KLRG2A4D1S0 409 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-206ENST00000535668 H0YIN7 160 aa15.09■□□□□ 0.01
CLSTN3-206ENST00000535668 PRELPP51888 382 aa15.09■□□□□ 0.01
CLSTN3-206ENST00000535668 FMNL2Q96PY5 1086 aa15.09■□□□□ 0.01
CLSTN3-206ENST00000535668 CARMIL3Q8ND23 1372 aa15.09■□□□□ 0.01
CLSTN3-206ENST00000535668 NFKBIEO00221 500 aa15.08■□□□□ 0
CLSTN3-206ENST00000535668 PDE6BP35913 854 aa15.08■□□□□ 0
CLSTN3-206ENST00000535668 PHACTR3Q96KR7 559 aa15.08■□□□□ 0
CLSTN3-206ENST00000535668 WDR90Q96KV7 1748 aa15.07■□□□□ 0
CLSTN3-206ENST00000535668 CAMTA2O94983 1202 aa15.07■□□□□ 0
CLSTN3-206ENST00000535668 PRR5LQ6MZQ0 368 aa15.07■□□□□ 0
CLSTN3-206ENST00000535668 SMC1BQ8NDV3 1235 aa15.07■□□□□ 0
CLSTN3-206ENST00000535668 KLRG1Q96E93 195 aa15.07■□□□□ 0
CLSTN3-206ENST00000535668 ANKRD31Q8N7Z5 1873 aa15.07■□□□□ 0
CLSTN3-206ENST00000535668 VEGFAP15692 232 aaPredicted RBP15.06■□□□□ 0
CLSTN3-206ENST00000535668 CANXP27824 592 aaKnown RBP15.06■□□□□ 0
CLSTN3-206ENST00000535668 TBC1D9BQ66K14 1250 aa15.06■□□□□ 0
CLSTN3-206ENST00000535668 C2CD5Q86YS7 1000 aa15.06■□□□□ 0
CLSTN3-206ENST00000535668 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
CLSTN3-206ENST00000535668 STYK1Q6J9G0 422 aa15.05■□□□□ -0
CLSTN3-206ENST00000535668 CFAP53Q96M91 514 aa15.05■□□□□ -0
CLSTN3-206ENST00000535668 DICER1Q9UPY3 1922 aaKnown RBP15.05■□□□□ -0
CLSTN3-206ENST00000535668 U2SURPO15042 1029 aaKnown RBP15.04■□□□□ -0
CLSTN3-206ENST00000535668 SRGNP10124 158 aa15.04■□□□□ -0
CLSTN3-206ENST00000535668 SOGA3Q5TF21 947 aa15.04■□□□□ -0
CLSTN3-206ENST00000535668 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
CLSTN3-206ENST00000535668 C7orf43Q8WVR3 580 aa15.04■□□□□ -0
CLSTN3-206ENST00000535668 RRAGCQ9HB90 399 aa15.04■□□□□ -0
CLSTN3-206ENST00000535668 NUDCQ9Y266 331 aa15.04■□□□□ -0
CLSTN3-206ENST00000535668 BTBD11A6QL63 1104 aa15.03■□□□□ -0
CLSTN3-206ENST00000535668 POTECB2RU33 542 aa15.03■□□□□ -0
CLSTN3-206ENST00000535668 A1BGP04217 495 aa15.03■□□□□ -0
CLSTN3-206ENST00000535668 SNRPA1P09661 255 aaKnown RBP15.03■□□□□ -0
CLSTN3-206ENST00000535668 PRKAR2BP31323 418 aa15.03■□□□□ -0
CLSTN3-206ENST00000535668 CNKSR1Q969H4 720 aa15.03■□□□□ -0
CLSTN3-206ENST00000535668 SETDB2Q96T68 719 aa15.03■□□□□ -0
CLSTN3-206ENST00000535668 BCORQ6W2J9 1755 aa15.03■□□□□ -0
CLSTN3-206ENST00000535668 RASSF7Q02833 373 aa15.02■□□□□ -0
CLSTN3-206ENST00000535668 TBC1D2BQ9UPU7 963 aa15.02■□□□□ -0
CLSTN3-206ENST00000535668 USP16Q9Y5T5 823 aa15.02■□□□□ -0
CLSTN3-206ENST00000535668 ARFGEF2Q9Y6D5 1785 aa15.02□□□□□ -0.01
CLSTN3-206ENST00000535668 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
CLSTN3-206ENST00000535668 DPY19L2Q6NUT2 758 aa15.01□□□□□ -0.01
CLSTN3-206ENST00000535668 CNBD1Q8NA66 436 aa15.01□□□□□ -0.01
CLSTN3-206ENST00000535668 MASTLQ96GX5 879 aa15.01□□□□□ -0.01
CLSTN3-206ENST00000535668 KCNQ3O43525 872 aa15□□□□□ -0.01
CLSTN3-206ENST00000535668 COL11A2P13942 1736 aaPredicted RBP15□□□□□ -0.01
CLSTN3-206ENST00000535668 DZIP3Q86Y13 1208 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms