RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 TMEM266Q2M3C6 531 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 GTPBP4Q9BZE4 634 aaKnown RBP11.05□□□□□ -0.64
TNC-210ENST00000535648 KIF18AQ8NI77 898 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 PTPN23Q9H3S7 1636 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 BICDL1Q6ZP65 573 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 MINDY4BA8MYZ0 360 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 PRPF40BQ6NWY9 871 aaKnown RBP11.05□□□□□ -0.64
TNC-210ENST00000535648 CRACR2BQ8N4Y2 399 aaPredicted RBP11.05□□□□□ -0.64
TNC-210ENST00000535648 ZPR1O75312 459 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 TOP1P11387 765 aaKnown RBP11.04□□□□□ -0.64
TNC-210ENST00000535648 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
TNC-210ENST00000535648 NCAPD3P42695 1498 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 SSRP1Q08945 709 aaKnown RBP11.04□□□□□ -0.64
TNC-210ENST00000535648 MAP3K12Q12852 859 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 CTCFLQ8NI51 663 aaPredicted RBP11.04□□□□□ -0.64
TNC-210ENST00000535648 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 TMOD3Q9NYL9 352 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 CUL5Q93034 780 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 DZIP1Q86YF9 867 aaKnown RBP11.04□□□□□ -0.64
TNC-210ENST00000535648 SLC12A7Q9Y666 1083 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 SLC5A1P13866 664 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 IQCA1Q86XH1 822 aa11.04□□□□□ -0.64
TNC-210ENST00000535648 KIF20AO95235 890 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 CCDC85AQ96PX6 553 aaPredicted RBP11.03□□□□□ -0.64
TNC-210ENST00000535648 TAF7Q15545 349 aaPredicted RBP11.03□□□□□ -0.64
TNC-210ENST00000535648 SLF2Q8IX21 1173 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 RNF41Q9H4P4 317 aaPredicted RBP11.03□□□□□ -0.64
TNC-210ENST00000535648 A0A087WZG4 1122 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 GCOM1H8Y6P7 765 aaPredicted RBP11.03□□□□□ -0.64
TNC-210ENST00000535648 USO1O60763 962 aaKnown RBP11.03□□□□□ -0.64
TNC-210ENST00000535648 MYZAPP0CAP1 466 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 TERF1P54274 439 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 CCDC178Q5BJE1 867 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 SMAP1Q8IYB5 467 aaPredicted RBP11.03□□□□□ -0.64
TNC-210ENST00000535648 MYD88Q99836 296 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 CCDC61Q9Y6R9 512 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 ZNF213O14771 459 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 BOLA2Q9H3K6 86 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 ANKIB1Q9P2G1 1089 aa11.03□□□□□ -0.64
TNC-210ENST00000535648 IFIT5Q13325 482 aaKnown RBP11.02□□□□□ -0.64
TNC-210ENST00000535648 LUZP1Q86V48 1076 aa11.02□□□□□ -0.64
TNC-210ENST00000535648 ZNF444Q8N0Y2 327 aaPredicted RBP11.02□□□□□ -0.64
TNC-210ENST00000535648 ERICH4A6NGS2 130 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 CCDC97Q96F63 343 aaPredicted RBP11.02□□□□□ -0.65
TNC-210ENST00000535648 NUP88Q99567 741 aaPredicted RBP11.02□□□□□ -0.65
TNC-210ENST00000535648 CLIP2Q9UDT6 1046 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 STAMBPO95630 424 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 CCDC113Q9H0I3 377 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 HYPKQ9NX55 129 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 MIS18AQ9NYP9 233 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 PTPRCP08575 1304 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 IFFO1Q0D2I5 559 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 KIF4BQ2VIQ3 1234 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 MCM10Q7L590 875 aa11.02□□□□□ -0.65
TNC-210ENST00000535648 DHX29Q7Z478 1369 aaKnown RBP11.01□□□□□ -0.65
TNC-210ENST00000535648 SMARCA5O60264 1052 aaPredicted RBP11.01□□□□□ -0.65
TNC-210ENST00000535648 NEMFO60524 1076 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 CATIPQ7Z7H3 387 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 CUL7Q14999 1698 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 GOLGA6L10A0A0M3HER8 536 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 CNNM3Q8NE01 707 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 GOPCQ9HD26 462 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 CGNQ9P2M7 1197 aaKnown RBP11.01□□□□□ -0.65
TNC-210ENST00000535648 SNAPC4Q5SXM2 1469 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 YEATS4O95619 227 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 SCLT1Q96NL6 688 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 PAFAH1B1P43034 410 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 FERMT3Q86UX7 667 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 PYM1Q9BRP8 204 aaKnown RBP11.01□□□□□ -0.65
TNC-210ENST00000535648 UBA5Q9GZZ9 404 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 LIMCH1Q9UPQ0 1083 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 TAOK3Q9H2K8 898 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 NCOA1Q15788 1441 aa11.01□□□□□ -0.65
TNC-210ENST00000535648 BAG4O95429 457 aaKnown RBP11□□□□□ -0.65
TNC-210ENST00000535648 CCDC96Q2M329 555 aa11□□□□□ -0.65
TNC-210ENST00000535648 POTEB2H3BUK9 544 aa11□□□□□ -0.65
TNC-210ENST00000535648 GSDMDP57764 484 aa11□□□□□ -0.65
TNC-210ENST00000535648 RANBP6O60518 1105 aaKnown RBP11□□□□□ -0.65
TNC-210ENST00000535648 GSTTP1A0A1W2PQM5 241 aa11□□□□□ -0.65
TNC-210ENST00000535648 AMPD3Q01432 767 aa11□□□□□ -0.65
TNC-210ENST00000535648 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11□□□□□ -0.65
TNC-210ENST00000535648 NLRP5P59047 1200 aa11□□□□□ -0.65
TNC-210ENST00000535648 ZC3H6P61129 1189 aaKnown RBP11□□□□□ -0.65
TNC-210ENST00000535648 CCDC12Q8WUD4 166 aaPredicted RBP11□□□□□ -0.65
TNC-210ENST00000535648 URI1O94763 535 aaPredicted RBP11□□□□□ -0.65
TNC-210ENST00000535648 MICALCLQ6ZW33 695 aa11□□□□□ -0.65
TNC-210ENST00000535648 EVI5LQ96CN4 794 aa11□□□□□ -0.65
TNC-210ENST00000535648 ALS2CR12Q96Q35 445 aa11□□□□□ -0.65
TNC-210ENST00000535648 NAA15Q9BXJ9 866 aaKnown RBP11□□□□□ -0.65
TNC-210ENST00000535648 RARSP54136 660 aaKnown RBP10.99□□□□□ -0.65
TNC-210ENST00000535648 CETN1Q12798 172 aa10.99□□□□□ -0.65
TNC-210ENST00000535648 TTF1Q15361 905 aaPredicted RBP10.99□□□□□ -0.65
TNC-210ENST00000535648 STX1AQ16623 288 aa10.99□□□□□ -0.65
TNC-210ENST00000535648 HOOK3Q86VS8 718 aa10.99□□□□□ -0.65
TNC-210ENST00000535648 CCDC194A0A1B0GVG4 234 aa10.99□□□□□ -0.65
TNC-210ENST00000535648 GOLGA8BA8MQT2 603 aa10.99□□□□□ -0.65
TNC-210ENST00000535648 GRM1Q13255 1194 aa10.99□□□□□ -0.65
TNC-210ENST00000535648 DHX37Q8IY37 1157 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms