RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CCDC61Q9Y6R9 512 aa14.71□□□□□ -0.05
SPG11-203ENST00000535302 HECW1Q76N89 1606 aa14.71□□□□□ -0.05
SPG11-203ENST00000535302 TMCO5BA8MYB1 307 aa14.71□□□□□ -0.05
SPG11-203ENST00000535302 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.71□□□□□ -0.05
SPG11-203ENST00000535302 ANXA1P04083 346 aa14.71□□□□□ -0.05
SPG11-203ENST00000535302 TAF4BQ92750 862 aa14.71□□□□□ -0.05
SPG11-203ENST00000535302 BMP2KQ9NSY1 1161 aaPredicted RBP14.71□□□□□ -0.05
SPG11-203ENST00000535302 SEC63Q9UGP8 760 aaKnown RBP14.71□□□□□ -0.05
SPG11-203ENST00000535302 CEP63Q96MT8 703 aa14.71□□□□□ -0.05
SPG11-203ENST00000535302 TROQ12816 1431 aaPredicted RBP14.71□□□□□ -0.06
SPG11-203ENST00000535302 RNF187Q5TA31 235 aaPredicted RBP14.71□□□□□ -0.06
SPG11-203ENST00000535302 LUC7LQ9NQ29 371 aaKnown RBP14.71□□□□□ -0.06
SPG11-203ENST00000535302 PKNOX2Q96KN3 472 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 GSTTP1A0A1W2PQM5 241 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 ZSCAN31Q96LW9 406 aaPredicted RBP14.7□□□□□ -0.06
SPG11-203ENST00000535302 NAPBQ9H115 298 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 RPAP2Q8IXW5 612 aaPredicted RBP14.7□□□□□ -0.06
SPG11-203ENST00000535302 GIMAP7Q8NHV1 300 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 KIF1BPQ96EK5 621 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 VAT1LQ9HCJ6 419 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 JAKMIP3Q5VZ66 844 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 GDPD2Q9HCC8 539 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 CHRNA2Q15822 529 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 TMOD2Q9NZR1 351 aa14.7□□□□□ -0.06
SPG11-203ENST00000535302 CBFA2T2O43439 604 aa14.69□□□□□ -0.06
SPG11-203ENST00000535302 DRC1Q96MC2 740 aa14.69□□□□□ -0.06
SPG11-203ENST00000535302 HAND2P61296 217 aa14.69□□□□□ -0.06
SPG11-203ENST00000535302 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
SPG11-203ENST00000535302 USP8P40818 1118 aa14.69□□□□□ -0.06
SPG11-203ENST00000535302 IFIT5Q13325 482 aaKnown RBP14.69□□□□□ -0.06
SPG11-203ENST00000535302 AMOTL2Q9Y2J4 779 aa14.69□□□□□ -0.06
SPG11-203ENST00000535302 MAP3K2Q9Y2U5 619 aa14.69□□□□□ -0.06
SPG11-203ENST00000535302 PUF60Q9UHX1 559 aaKnown RBP14.69□□□□□ -0.06
SPG11-203ENST00000535302 SMC1AQ14683 1233 aaKnown RBP14.69□□□□□ -0.06
SPG11-203ENST00000535302 RARSP54136 660 aaKnown RBP14.68□□□□□ -0.06
SPG11-203ENST00000535302 KCNH5Q8NCM2 988 aa14.68□□□□□ -0.06
SPG11-203ENST00000535302 PANK2Q9BZ23 570 aa14.68□□□□□ -0.06
SPG11-203ENST00000535302 MCM4P33991 863 aa14.68□□□□□ -0.06
SPG11-203ENST00000535302 TMCO3Q6UWJ1 677 aa14.68□□□□□ -0.06
SPG11-203ENST00000535302 CKAP2LQ8IYA6 745 aa14.68□□□□□ -0.06
SPG11-203ENST00000535302 GPATCH11Q8N954 259 aa14.68□□□□□ -0.06
SPG11-203ENST00000535302 CASQ1P31415 396 aa14.68□□□□□ -0.06
SPG11-203ENST00000535302 PRPF4BQ13523 1007 aaKnown RBP14.68□□□□□ -0.06
SPG11-203ENST00000535302 LARP1Q6PKG0 1096 aaKnown RBP14.68□□□□□ -0.06
SPG11-203ENST00000535302 KRT32Q14532 448 aa14.68□□□□□ -0.06
SPG11-203ENST00000535302 RPGRQ92834 1020 aaKnown RBP14.68□□□□□ -0.06
SPG11-203ENST00000535302 A0A087WZG4 1122 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 EIF3JO75822 258 aaKnown RBP14.67□□□□□ -0.06
SPG11-203ENST00000535302 DESP17661 470 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 ARHGAP29Q52LW3 1261 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 IPO4Q8TEX9 1081 aaKnown RBP14.67□□□□□ -0.06
SPG11-203ENST00000535302 SUPT6HQ7KZ85 1726 aaKnown RBP14.67□□□□□ -0.06
SPG11-203ENST00000535302 ATP2C2O75185 946 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 AKAP2Q9Y2D5 859 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 ZNF652Q9Y2D9 606 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 GOLIM4O00461 696 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 IFFO1Q0D2I5 559 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 MAP3K11Q16584 847 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 SSFA2P28290 1259 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 CACNA2D4Q7Z3S7 1137 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 CCDC91Q7Z6B0 441 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 NGLY1Q96IV0 654 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 PLEKHH2Q8IVE3 1493 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 WASF1Q92558 559 aa14.67□□□□□ -0.06
SPG11-203ENST00000535302 BIN1O00499 593 aa14.66□□□□□ -0.06
SPG11-203ENST00000535302 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
SPG11-203ENST00000535302 C6orf229H3BNL8 230 aa14.66□□□□□ -0.06
SPG11-203ENST00000535302 ZNF354CQ86Y25 554 aa14.66□□□□□ -0.06
SPG11-203ENST00000535302 DNAAF4Q8WXU2 420 aa14.66□□□□□ -0.06
SPG11-203ENST00000535302 SLC12A7Q9Y666 1083 aa14.66□□□□□ -0.06
SPG11-203ENST00000535302 TIAM1Q13009 1591 aa14.66□□□□□ -0.06
SPG11-203ENST00000535302 ERLIN1O75477 346 aa14.66□□□□□ -0.06
SPG11-203ENST00000535302 ZNF444Q8N0Y2 327 aaPredicted RBP14.66□□□□□ -0.06
SPG11-203ENST00000535302 RPGRIP1LQ68CZ1 1315 aa14.66□□□□□ -0.06
SPG11-203ENST00000535302 PHF8Q9UPP1 1060 aa14.66□□□□□ -0.06
SPG11-203ENST00000535302 ZNF397Q8NF99 534 aaPredicted RBP14.65□□□□□ -0.06
SPG11-203ENST00000535302 CCDC148Q8NFR7 591 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 ZNF213O14771 459 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 ACSBG1Q96GR2 724 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 IFT140Q96RY7 1462 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 RAB11FIP3O75154 756 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 GLRX3O76003 335 aaKnown RBP14.65□□□□□ -0.06
SPG11-203ENST00000535302 URI1O94763 535 aaPredicted RBP14.65□□□□□ -0.06
SPG11-203ENST00000535302 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 GOLGA8BA8MQT2 603 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 SLC5A1P13866 664 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 TFIP11Q9UBB9 837 aaKnown RBP14.65□□□□□ -0.06
SPG11-203ENST00000535302 TOPBP1Q92547 1522 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 C8orf76Q96K31 380 aa14.65□□□□□ -0.06
SPG11-203ENST00000535302 CTNNA2P26232 953 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 APBB1IPQ7Z5R6 666 aaPredicted RBP14.64□□□□□ -0.07
SPG11-203ENST00000535302 IFIT3O14879 490 aaKnown RBP14.64□□□□□ -0.07
SPG11-203ENST00000535302 FAM107BQ9H098 131 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 NAIPQ13075 1403 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 ANKRD18BA2A2Z9 1011 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 GOLGA8AA7E2F4 631 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 ARL1P40616 181 aaPredicted RBP14.64□□□□□ -0.07
SPG11-203ENST00000535302 ZSWIM4Q9H7M6 989 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 IQSEC3Q9UPP2 1182 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms