RNA–Protein interactions for RNA: ENST00000535041.5

LRTM2-202, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM2, Length 3,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-202ENST00000535041 KLHDC4Q8TBB5 520 aa15.1■□□□□ 0.01
LRTM2-202ENST00000535041 LARP6Q9BRS8 491 aaKnown RBP15.09■□□□□ 0.01
LRTM2-202ENST00000535041 DBF4Q9UBU7 674 aaPredicted RBP15.09■□□□□ 0.01
LRTM2-202ENST00000535041 PXDNQ92626 1479 aa15.09■□□□□ 0.01
LRTM2-202ENST00000535041 PTCD1O75127 700 aaKnown RBP15.09■□□□□ 0.01
LRTM2-202ENST00000535041 TOM1L2Q6ZVM7 507 aa15.09■□□□□ 0.01
LRTM2-202ENST00000535041 TTC5Q8N0Z6 440 aa15.09■□□□□ 0.01
LRTM2-202ENST00000535041 ERBB3P21860 1342 aa15.09■□□□□ 0.01
LRTM2-202ENST00000535041 K7ELQ4 463 aaPredicted RBP15.09■□□□□ 0.01
LRTM2-202ENST00000535041 CLCN1P35523 988 aa15.09■□□□□ 0.01
LRTM2-202ENST00000535041 UPF3BQ9BZI7 483 aaKnown RBP15.09■□□□□ 0.01
LRTM2-202ENST00000535041 CHMP3Q9Y3E7 222 aa15.09■□□□□ 0.01
LRTM2-202ENST00000535041 GIGYF1O75420 1035 aaPredicted RBP15.08■□□□□ 0.01
LRTM2-202ENST00000535041 NCLP19338 710 aaKnown RBP15.08■□□□□ 0.01
LRTM2-202ENST00000535041 MCM4P33991 863 aa15.08■□□□□ 0.01
LRTM2-202ENST00000535041 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0
LRTM2-202ENST00000535041 ATP5J2-PTCD1G3V325 749 aa15.08■□□□□ 0
LRTM2-202ENST00000535041 FMN2Q9NZ56 1722 aa15.08■□□□□ 0
LRTM2-202ENST00000535041 ERC2O15083 957 aa15.07■□□□□ 0
LRTM2-202ENST00000535041 NEK4P51957 841 aa15.07■□□□□ 0
LRTM2-202ENST00000535041 USP26Q9BXU7 913 aa15.07■□□□□ 0
LRTM2-202ENST00000535041 REC8O95072 547 aa15.07■□□□□ 0
LRTM2-202ENST00000535041 SSFA2P28290 1259 aa15.07■□□□□ 0
LRTM2-202ENST00000535041 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
LRTM2-202ENST00000535041 BEND3Q5T5X7 828 aa15.06■□□□□ 0
LRTM2-202ENST00000535041 RHPN1Q8TCX5 695 aa15.06■□□□□ 0
LRTM2-202ENST00000535041 CHAMP1Q96JM3 812 aa15.06■□□□□ 0
LRTM2-202ENST00000535041 USP16Q9Y5T5 823 aa15.06■□□□□ 0
LRTM2-202ENST00000535041 C1orf167Q5SNV9 1468 aa15.06■□□□□ 0
LRTM2-202ENST00000535041 KIF24Q5T7B8 1368 aa15.06■□□□□ 0
LRTM2-202ENST00000535041 RBM10P98175 930 aaKnown RBP15.06■□□□□ 0
LRTM2-202ENST00000535041 COPS6Q7L5N1 327 aa15.06■□□□□ 0
LRTM2-202ENST00000535041 TNPO1Q92973 898 aaKnown RBP15.06■□□□□ 0
LRTM2-202ENST00000535041 VIRMAQ69YN4 1812 aaKnown RBP15.06■□□□□ 0
LRTM2-202ENST00000535041 RGPD1P0DJD0 1748 aa15.05■□□□□ 0
LRTM2-202ENST00000535041 XAGE3Q8WTP9 111 aa15.05■□□□□ 0
LRTM2-202ENST00000535041 MYD88Q99836 296 aa15.05■□□□□ 0
LRTM2-202ENST00000535041 NWD1Q149M9 1564 aa15.05■□□□□ 0
LRTM2-202ENST00000535041 CABP4P57796 275 aa15.05■□□□□ -0
LRTM2-202ENST00000535041 ZNF790Q6PG37 636 aa15.05■□□□□ -0
LRTM2-202ENST00000535041 CADPS2Q86UW7 1296 aa15.05■□□□□ -0
LRTM2-202ENST00000535041 CWC27Q6UX04 472 aaKnown RBP15.05■□□□□ -0
LRTM2-202ENST00000535041 TRIM44Q96DX7 344 aaPredicted RBP15.05■□□□□ -0
LRTM2-202ENST00000535041 CCDC8Q9H0W5 538 aaPredicted RBP15.05■□□□□ -0
LRTM2-202ENST00000535041 TRAK2O60296 914 aa15.04■□□□□ -0
LRTM2-202ENST00000535041 ZGPATQ8N5A5 531 aaKnown RBP15.04■□□□□ -0
LRTM2-202ENST00000535041 SPG7Q9UQ90 795 aa15.04■□□□□ -0
LRTM2-202ENST00000535041 LTN1O94822 1766 aa15.04■□□□□ -0
LRTM2-202ENST00000535041 EVA1CP58658 441 aa15.04■□□□□ -0
LRTM2-202ENST00000535041 PALD1Q9ULE6 856 aa15.04■□□□□ -0
LRTM2-202ENST00000535041 NPHP3Q7Z494 1330 aa15.03■□□□□ -0
LRTM2-202ENST00000535041 CEMIPQ8WUJ3 1361 aa15.03■□□□□ -0
LRTM2-202ENST00000535041 RGPD2P0DJD1 1756 aa15.03■□□□□ -0
LRTM2-202ENST00000535041 PKP1Q13835 747 aa15.03■□□□□ -0
LRTM2-202ENST00000535041 CHD2O14647 1828 aaKnown RBP15.03■□□□□ -0
LRTM2-202ENST00000535041 ESPNB1AK53 854 aa15.03■□□□□ -0
LRTM2-202ENST00000535041 ST18O60284 1047 aa15.02■□□□□ -0
LRTM2-202ENST00000535041 IFIT2P09913 472 aaKnown RBP15.02■□□□□ -0
LRTM2-202ENST00000535041 RABEP1Q15276 862 aa15.02■□□□□ -0
LRTM2-202ENST00000535041 KSR2Q6VAB6 950 aa15.02■□□□□ -0
LRTM2-202ENST00000535041 IFNL2Q8IZJ0 200 aa15.02■□□□□ -0
LRTM2-202ENST00000535041 IL25Q9H293 177 aa15.02■□□□□ -0
LRTM2-202ENST00000535041 ERBB4Q15303 1308 aa15.02□□□□□ -0.01
LRTM2-202ENST00000535041 ZNF335Q9H4Z2 1342 aaPredicted RBP15.02□□□□□ -0.01
LRTM2-202ENST00000535041 CYP27B1O15528 508 aa15.02□□□□□ -0.01
LRTM2-202ENST00000535041 DDX58O95786 925 aaKnown RBP15.02□□□□□ -0.01
LRTM2-202ENST00000535041 AACSQ86V21 672 aa15.02□□□□□ -0.01
LRTM2-202ENST00000535041 ADCY9O60503 1353 aa15.02□□□□□ -0.01
LRTM2-202ENST00000535041 PHKG2P15735 406 aa15.02□□□□□ -0.01
LRTM2-202ENST00000535041 NEXNQ0ZGT2 675 aa15.02□□□□□ -0.01
LRTM2-202ENST00000535041 SUCLG2Q96I99 432 aa15.02□□□□□ -0.01
LRTM2-202ENST00000535041 CCDC85AQ96PX6 553 aaPredicted RBP15.02□□□□□ -0.01
LRTM2-202ENST00000535041 BICC1Q9H694 974 aaKnown RBP15.02□□□□□ -0.01
LRTM2-202ENST00000535041 CLASRPQ8N2M8 674 aaKnown RBP15.01□□□□□ -0.01
LRTM2-202ENST00000535041 ESYT1Q9BSJ8 1104 aa15.01□□□□□ -0.01
LRTM2-202ENST00000535041 IBTKQ9P2D0 1353 aaPredicted RBP15.01□□□□□ -0.01
LRTM2-202ENST00000535041 SSH3Q8TE77 659 aa15.01□□□□□ -0.01
LRTM2-202ENST00000535041 KIF1BPQ96EK5 621 aa15.01□□□□□ -0.01
LRTM2-202ENST00000535041 SLC52A2Q9HAB3 445 aa15.01□□□□□ -0.01
LRTM2-202ENST00000535041 NDUFB9Q9Y6M9 179 aa15.01□□□□□ -0.01
LRTM2-202ENST00000535041 CHMLP26374 656 aa15□□□□□ -0.01
LRTM2-202ENST00000535041 SNX21Q969T3 373 aa15□□□□□ -0.01
LRTM2-202ENST00000535041 NFAT5O94916 1531 aa15□□□□□ -0.01
LRTM2-202ENST00000535041 UBE3BQ7Z3V4 1068 aa15□□□□□ -0.01
LRTM2-202ENST00000535041 SYTL4Q96C24 671 aaPredicted RBP15□□□□□ -0.01
LRTM2-202ENST00000535041 KCNJ4P48050 445 aa15□□□□□ -0.01
LRTM2-202ENST00000535041 G3BP1Q13283 466 aaKnown RBP eCLIP15□□□□□ -0.01
LRTM2-202ENST00000535041 MCTP1Q6DN14 999 aa15□□□□□ -0.01
LRTM2-202ENST00000535041 CPA1P15085 419 aa14.99□□□□□ -0.01
LRTM2-202ENST00000535041 GRM8O00222 908 aa14.99□□□□□ -0.01
LRTM2-202ENST00000535041 MCCP23508 829 aa14.99□□□□□ -0.01
LRTM2-202ENST00000535041 GBP4Q96PP9 640 aa14.99□□□□□ -0.01
LRTM2-202ENST00000535041 BOLA2Q9H3K6 86 aa14.99□□□□□ -0.01
LRTM2-202ENST00000535041 ZBTB3Q9H5J0 574 aa14.99□□□□□ -0.01
LRTM2-202ENST00000535041 BABAM1Q9NWV8 329 aa14.99□□□□□ -0.01
LRTM2-202ENST00000535041 HYPKQ9NX55 129 aa14.99□□□□□ -0.01
LRTM2-202ENST00000535041 KIAA1211Q6ZU35 1233 aa14.98□□□□□ -0.01
LRTM2-202ENST00000535041 BRINP3Q76B58 766 aa14.98□□□□□ -0.01
LRTM2-202ENST00000535041 DDX21Q9NR30 783 aaKnown RBP eCLIP14.98□□□□□ -0.01
LRTM2-202ENST00000535041 DIAPH3Q9NSV4 1193 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms