RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 U2AF1L5P0DN76 240 aaPredicted RBP25.19■■□□□ 1.62
NDUFS3-213ENST00000534716 U2AF1Q01081 240 aaKnown RBP eCLIP25.19■■□□□ 1.62
NDUFS3-213ENST00000534716 DDR1Q08345 913 aa25.19■■□□□ 1.62
NDUFS3-213ENST00000534716 USPL1Q5W0Q7 1092 aa25.19■■□□□ 1.62
NDUFS3-213ENST00000534716 TEX13AQ9BXU3 409 aaPredicted RBP25.19■■□□□ 1.62
NDUFS3-213ENST00000534716 NARFQ9UHQ1 456 aa25.19■■□□□ 1.62
NDUFS3-213ENST00000534716 GIGYF1O75420 1035 aaPredicted RBP25.18■■□□□ 1.62
NDUFS3-213ENST00000534716 ZNF496Q96IT1 587 aaPredicted RBP25.18■■□□□ 1.62
NDUFS3-213ENST00000534716 SIPA1L3O60292 1781 aaPredicted RBP25.18■■□□□ 1.62
NDUFS3-213ENST00000534716 HEG1Q9ULI3 1381 aa25.18■■□□□ 1.62
NDUFS3-213ENST00000534716 POLRMTO00411 1230 aaKnown RBP25.17■■□□□ 1.62
NDUFS3-213ENST00000534716 WWC3Q9ULE0 1092 aa25.17■■□□□ 1.62
NDUFS3-213ENST00000534716 DPEP1P16444 411 aa25.16■■□□□ 1.62
NDUFS3-213ENST00000534716 KCNA3P22001 575 aa25.16■■□□□ 1.62
NDUFS3-213ENST00000534716 ATP10DQ9P241 1426 aa25.15■■□□□ 1.62
NDUFS3-213ENST00000534716 EIF5P55010 431 aaKnown RBP25.15■■□□□ 1.62
NDUFS3-213ENST00000534716 FMNL2Q96PY5 1086 aa25.14■■□□□ 1.62
NDUFS3-213ENST00000534716 N4BP2Q86UW6 1770 aaPredicted RBP25.13■■□□□ 1.61
NDUFS3-213ENST00000534716 HTATSF1O43719 755 aaKnown RBP25.13■■□□□ 1.61
NDUFS3-213ENST00000534716 BCL2L12Q9HB09 334 aa25.13■■□□□ 1.61
NDUFS3-213ENST00000534716 BCS1LQ9Y276 419 aa25.13■■□□□ 1.61
NDUFS3-213ENST00000534716 A0A087WZG4 1122 aa25.12■■□□□ 1.61
NDUFS3-213ENST00000534716 BTBD11A6QL63 1104 aa25.12■■□□□ 1.61
NDUFS3-213ENST00000534716 CANXP27824 592 aaKnown RBP25.11■■□□□ 1.61
NDUFS3-213ENST00000534716 NFIXQ14938 502 aa25.11■■□□□ 1.61
NDUFS3-213ENST00000534716 RTF1Q92541 710 aaKnown RBP25.11■■□□□ 1.61
NDUFS3-213ENST00000534716 PIM2Q9P1W9 311 aa25.1■■□□□ 1.61
NDUFS3-213ENST00000534716 IL6STP40189 918 aaPredicted RBP25.09■■□□□ 1.61
NDUFS3-213ENST00000534716 BRCA1P38398 1863 aaKnown RBP25.09■■□□□ 1.61
NDUFS3-213ENST00000534716 KCNQ3O43525 872 aa25.08■■□□□ 1.61
NDUFS3-213ENST00000534716 NRXN2Q9P2S2 1712 aa25.07■■□□□ 1.6
NDUFS3-213ENST00000534716 MCM10Q7L590 875 aa25.07■■□□□ 1.6
NDUFS3-213ENST00000534716 DALRD3Q5D0E6 543 aaKnown RBP25.06■■□□□ 1.6
NDUFS3-213ENST00000534716 GPBP1L1Q9HC44 474 aaPredicted RBP25.06■■□□□ 1.6
NDUFS3-213ENST00000534716 SERPINB2P05120 415 aa25.05■■□□□ 1.6
NDUFS3-213ENST00000534716 ARHGAP27Q6ZUM4 889 aa25.04■■□□□ 1.6
NDUFS3-213ENST00000534716 PLEKHF1Q96S99 279 aa25.04■■□□□ 1.6
NDUFS3-213ENST00000534716 A1BGP04217 495 aa25.03■■□□□ 1.6
NDUFS3-213ENST00000534716 CHRNA5P30532 468 aa25.03■■□□□ 1.6
NDUFS3-213ENST00000534716 DCTN1Q14203 1278 aa25.02■■□□□ 1.6
NDUFS3-213ENST00000534716 USP16Q9Y5T5 823 aa25.02■■□□□ 1.6
NDUFS3-213ENST00000534716 ARFGEF1Q9Y6D6 1849 aa25.01■■□□□ 1.59
NDUFS3-213ENST00000534716 NEFMP07197 916 aa25.01■■□□□ 1.59
NDUFS3-213ENST00000534716 SNRPA1P09661 255 aaKnown RBP25.01■■□□□ 1.59
NDUFS3-213ENST00000534716 TAF7Q15545 349 aaPredicted RBP25.01■■□□□ 1.59
NDUFS3-213ENST00000534716 SCN7AQ01118 1682 aa25.01■■□□□ 1.59
NDUFS3-213ENST00000534716 RALBP1Q15311 655 aa25■■□□□ 1.59
NDUFS3-213ENST00000534716 TBC1D2BQ9UPU7 963 aa25■■□□□ 1.59
NDUFS3-213ENST00000534716 AFDNP55196 1824 aaKnown RBP25■■□□□ 1.59
NDUFS3-213ENST00000534716 TBC1D9BQ66K14 1250 aa24.99■■□□□ 1.59
NDUFS3-213ENST00000534716 PNNQ9H307 717 aaKnown RBP24.99■■□□□ 1.59
NDUFS3-213ENST00000534716 CAMTA2O94983 1202 aa24.98■■□□□ 1.59
NDUFS3-213ENST00000534716 NPM2Q86SE8 214 aaKnown RBP24.98■■□□□ 1.59
NDUFS3-213ENST00000534716 CARMIL3Q8ND23 1372 aa24.97■■□□□ 1.59
NDUFS3-213ENST00000534716 PRAMEF22A3QJZ6 481 aa24.97■■□□□ 1.59
NDUFS3-213ENST00000534716 ZNF526Q8TF50 670 aaPredicted RBP24.97■■□□□ 1.59
NDUFS3-213ENST00000534716 ZNF330Q9Y3S2 320 aaPredicted RBP24.97■■□□□ 1.59
NDUFS3-213ENST00000534716 CEP350Q5VT06 3117 aa24.97■■□□□ 1.59
NDUFS3-213ENST00000534716 NFE2L2Q16236 605 aa24.96■■□□□ 1.59
NDUFS3-213ENST00000534716 BICDL1Q6ZP65 573 aa24.96■■□□□ 1.59
NDUFS3-213ENST00000534716 PDZRN3Q9UPQ7 1066 aa24.96■■□□□ 1.59
NDUFS3-213ENST00000534716 RGL2O15211 777 aa24.95■■□□□ 1.58
NDUFS3-213ENST00000534716 CLEC4GQ6UXB4 293 aa24.95■■□□□ 1.58
NDUFS3-213ENST00000534716 DZIP3Q86Y13 1208 aaKnown RBP24.95■■□□□ 1.58
NDUFS3-213ENST00000534716 PNISRQ8TF01 805 aaKnown RBP24.95■■□□□ 1.58
NDUFS3-213ENST00000534716 C9orf131Q5VYM1 1079 aa24.94■■□□□ 1.58
NDUFS3-213ENST00000534716 BRIP1Q9BX63 1249 aa24.94■■□□□ 1.58
NDUFS3-213ENST00000534716 H0YIN7 160 aa24.93■■□□□ 1.58
NDUFS3-213ENST00000534716 KIF3CO14782 793 aa24.93■■□□□ 1.58
NDUFS3-213ENST00000534716 PRR5LQ6MZQ0 368 aa24.93■■□□□ 1.58
NDUFS3-213ENST00000534716 C2CD5Q86YS7 1000 aa24.93■■□□□ 1.58
NDUFS3-213ENST00000534716 TTLL6Q8N841 843 aa24.93■■□□□ 1.58
NDUFS3-213ENST00000534716 SETDB2Q96T68 719 aa24.93■■□□□ 1.58
NDUFS3-213ENST00000534716 DLEC1Q9Y238 1755 aa24.93■■□□□ 1.58
NDUFS3-213ENST00000534716 NBPF26B4DH59 902 aa24.92■■□□□ 1.58
NDUFS3-213ENST00000534716 PDE6BP35913 854 aa24.92■■□□□ 1.58
NDUFS3-213ENST00000534716 NBPF10Q6P3W6 841 aaKnown RBP24.92■■□□□ 1.58
NDUFS3-213ENST00000534716 NBPF15Q8N660 670 aa24.92■■□□□ 1.58
NDUFS3-213ENST00000534716 MIS18AQ9NYP9 233 aa24.91■■□□□ 1.58
NDUFS3-213ENST00000534716 BCORQ6W2J9 1755 aa24.9■■□□□ 1.58
NDUFS3-213ENST00000534716 MAPK8IP3Q9UPT6 1336 aa24.9■■□□□ 1.58
NDUFS3-213ENST00000534716 PIP4K2AP48426 406 aaPredicted RBP24.9■■□□□ 1.58
NDUFS3-213ENST00000534716 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.58
NDUFS3-213ENST00000534716 CNBD1Q8NA66 436 aa24.88■■□□□ 1.57
NDUFS3-213ENST00000534716 ZNF652Q9Y2D9 606 aa24.88■■□□□ 1.57
NDUFS3-213ENST00000534716 DLG5Q8TDM6 1919 aa24.87■■□□□ 1.57
NDUFS3-213ENST00000534716 EIF4A1P60842 406 aaKnown RBP24.87■■□□□ 1.57
NDUFS3-213ENST00000534716 RNF181Q9P0P0 153 aa24.87■■□□□ 1.57
NDUFS3-213ENST00000534716 KDM3BQ7LBC6 1761 aa24.87■■□□□ 1.57
NDUFS3-213ENST00000534716 MYBBP1AQ9BQG0 1328 aaKnown RBP24.86■■□□□ 1.57
NDUFS3-213ENST00000534716 ZC3H4Q9UPT8 1303 aaKnown RBP24.86■■□□□ 1.57
NDUFS3-213ENST00000534716 ANKRD31Q8N7Z5 1873 aa24.85■■□□□ 1.57
NDUFS3-213ENST00000534716 ST5P78524 1137 aa24.85■■□□□ 1.57
NDUFS3-213ENST00000534716 THUMPD2Q9BTF0 503 aaKnown RBP24.85■■□□□ 1.57
NDUFS3-213ENST00000534716 LAMB4A4D0S4 1761 aa24.84■■□□□ 1.57
NDUFS3-213ENST00000534716 HSPA6P17066 643 aa24.83■■□□□ 1.57
NDUFS3-213ENST00000534716 LMNB1P20700 586 aa24.83■■□□□ 1.57
NDUFS3-213ENST00000534716 ZNF622Q969S3 477 aaKnown RBP eCLIP24.83■■□□□ 1.57
NDUFS3-213ENST00000534716 BABAM1Q9NWV8 329 aa24.83■■□□□ 1.57
NDUFS3-213ENST00000534716 TOMM70O94826 608 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms