RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 USPL1Q5W0Q7 1092 aa24.75■■□□□ 1.55
CTSB-233ENST00000534636 ZBTB1Q9Y2K1 713 aa24.75■■□□□ 1.55
CTSB-233ENST00000534636 STARD3NLO95772 234 aa24.74■■□□□ 1.55
CTSB-233ENST00000534636 DDR1Q08345 913 aa24.74■■□□□ 1.55
CTSB-233ENST00000534636 POLRMTO00411 1230 aaKnown RBP24.72■■□□□ 1.55
CTSB-233ENST00000534636 PRKAR2BP31323 418 aa24.72■■□□□ 1.55
CTSB-233ENST00000534636 ARHGAP27Q6ZUM4 889 aa24.72■■□□□ 1.55
CTSB-233ENST00000534636 PIM2Q9P1W9 311 aa24.72■■□□□ 1.55
CTSB-233ENST00000534636 NARFQ9UHQ1 456 aa24.72■■□□□ 1.55
CTSB-233ENST00000534636 AFDNP55196 1824 aaKnown RBP24.71■■□□□ 1.55
CTSB-233ENST00000534636 ZNF790Q6PG37 636 aa24.71■■□□□ 1.55
CTSB-233ENST00000534636 CEP350Q5VT06 3117 aa24.71■■□□□ 1.55
CTSB-233ENST00000534636 CANXP27824 592 aaKnown RBP24.7■■□□□ 1.54
CTSB-233ENST00000534636 IL17REQ8NFR9 667 aa24.7■■□□□ 1.54
CTSB-233ENST00000534636 TEX13AQ9BXU3 409 aaPredicted RBP24.7■■□□□ 1.54
CTSB-233ENST00000534636 TM4SF1P30408 202 aa24.69■■□□□ 1.54
CTSB-233ENST00000534636 DALRD3Q5D0E6 543 aaKnown RBP24.69■■□□□ 1.54
CTSB-233ENST00000534636 RSPH6AQ9H0K4 717 aa24.69■■□□□ 1.54
CTSB-233ENST00000534636 HEG1Q9ULI3 1381 aa24.68■■□□□ 1.54
CTSB-233ENST00000534636 A0A087WZG4 1122 aa24.68■■□□□ 1.54
CTSB-233ENST00000534636 U2AF1L5P0DN76 240 aaPredicted RBP24.68■■□□□ 1.54
CTSB-233ENST00000534636 PPP2R1AP30153 589 aa24.68■■□□□ 1.54
CTSB-233ENST00000534636 U2AF1Q01081 240 aaKnown RBP eCLIP24.68■■□□□ 1.54
CTSB-233ENST00000534636 ZNF496Q96IT1 587 aaPredicted RBP24.68■■□□□ 1.54
CTSB-233ENST00000534636 KCNA3P22001 575 aa24.67■■□□□ 1.54
CTSB-233ENST00000534636 NFIXQ14938 502 aa24.67■■□□□ 1.54
CTSB-233ENST00000534636 NPM2Q86SE8 214 aaKnown RBP24.67■■□□□ 1.54
CTSB-233ENST00000534636 FMNL2Q96PY5 1086 aa24.67■■□□□ 1.54
CTSB-233ENST00000534636 CEMIPQ8WUJ3 1361 aa24.67■■□□□ 1.54
CTSB-233ENST00000534636 RTF1Q92541 710 aaKnown RBP24.66■■□□□ 1.54
CTSB-233ENST00000534636 NRXN2Q9P2S2 1712 aa24.66■■□□□ 1.54
CTSB-233ENST00000534636 BTBD11A6QL63 1104 aa24.65■■□□□ 1.54
CTSB-233ENST00000534636 PHACTR3Q96KR7 559 aa24.65■■□□□ 1.54
CTSB-233ENST00000534636 ZNF330Q9Y3S2 320 aaPredicted RBP24.65■■□□□ 1.54
CTSB-233ENST00000534636 SCN7AQ01118 1682 aa24.65■■□□□ 1.54
CTSB-233ENST00000534636 CHRNA5P30532 468 aa24.64■■□□□ 1.54
CTSB-233ENST00000534636 EIF5P55010 431 aaKnown RBP24.63■■□□□ 1.53
CTSB-233ENST00000534636 DLEC1Q9Y238 1755 aa24.62■■□□□ 1.53
CTSB-233ENST00000534636 SERPINB2P05120 415 aa24.62■■□□□ 1.53
CTSB-233ENST00000534636 BICDL1Q6ZP65 573 aa24.61■■□□□ 1.53
CTSB-233ENST00000534636 BCL2L12Q9HB09 334 aa24.61■■□□□ 1.53
CTSB-233ENST00000534636 NEFMP07197 916 aa24.6■■□□□ 1.53
CTSB-233ENST00000534636 IL6STP40189 918 aaPredicted RBP24.6■■□□□ 1.53
CTSB-233ENST00000534636 C9orf131Q5VYM1 1079 aa24.6■■□□□ 1.53
CTSB-233ENST00000534636 KIF3CO14782 793 aa24.57■■□□□ 1.52
CTSB-233ENST00000534636 MCM10Q7L590 875 aa24.57■■□□□ 1.52
CTSB-233ENST00000534636 SBF1O95248 1867 aa24.57■■□□□ 1.52
CTSB-233ENST00000534636 CARMIL3Q8ND23 1372 aa24.56■■□□□ 1.52
CTSB-233ENST00000534636 HSPA6P17066 643 aa24.56■■□□□ 1.52
CTSB-233ENST00000534636 RNF181Q9P0P0 153 aa24.56■■□□□ 1.52
CTSB-233ENST00000534636 TBC1D2BQ9UPU7 963 aa24.56■■□□□ 1.52
CTSB-233ENST00000534636 BCORQ6W2J9 1755 aa24.56■■□□□ 1.52
CTSB-233ENST00000534636 H0YIN7 160 aa24.55■■□□□ 1.52
CTSB-233ENST00000534636 NPHP1O15259 732 aa24.55■■□□□ 1.52
CTSB-233ENST00000534636 HTATSF1O43719 755 aaKnown RBP24.55■■□□□ 1.52
CTSB-233ENST00000534636 TBC1D9BQ66K14 1250 aa24.55■■□□□ 1.52
CTSB-233ENST00000534636 C2CD5Q86YS7 1000 aa24.55■■□□□ 1.52
CTSB-233ENST00000534636 KCNQ3O43525 872 aa24.54■■□□□ 1.52
CTSB-233ENST00000534636 A1BGP04217 495 aa24.54■■□□□ 1.52
CTSB-233ENST00000534636 TTLL6Q8N841 843 aa24.54■■□□□ 1.52
CTSB-233ENST00000534636 SNRPA1P09661 255 aaKnown RBP24.53■■□□□ 1.52
CTSB-233ENST00000534636 KDM2BQ8NHM5 1336 aa24.53■■□□□ 1.52
CTSB-233ENST00000534636 ANKRD31Q8N7Z5 1873 aa24.52■■□□□ 1.52
CTSB-233ENST00000534636 SETDB2Q96T68 719 aa24.52■■□□□ 1.52
CTSB-233ENST00000534636 PDZRN3Q9UPQ7 1066 aa24.52■■□□□ 1.52
CTSB-233ENST00000534636 DLG5Q8TDM6 1919 aa24.52■■□□□ 1.52
CTSB-233ENST00000534636 PDE6BP35913 854 aa24.51■■□□□ 1.51
CTSB-233ENST00000534636 DZIP3Q86Y13 1208 aaKnown RBP24.51■■□□□ 1.51
CTSB-233ENST00000534636 C16orf71Q8IYS4 520 aaPredicted RBP24.51■■□□□ 1.51
CTSB-233ENST00000534636 TOMM70O94826 608 aa24.5■■□□□ 1.51
CTSB-233ENST00000534636 DCTN1Q14203 1278 aa24.5■■□□□ 1.51
CTSB-233ENST00000534636 CNBD1Q8NA66 436 aa24.5■■□□□ 1.51
CTSB-233ENST00000534636 NMRK2Q9NPI5 230 aa24.5■■□□□ 1.51
CTSB-233ENST00000534636 TNRC6CQ9HCJ0 1690 aaKnown RBP24.5■■□□□ 1.51
CTSB-233ENST00000534636 CAMTA2O94983 1202 aa24.49■■□□□ 1.51
CTSB-233ENST00000534636 ST5P78524 1137 aa24.49■■□□□ 1.51
CTSB-233ENST00000534636 BRIP1Q9BX63 1249 aa24.49■■□□□ 1.51
CTSB-233ENST00000534636 ZNF652Q9Y2D9 606 aa24.49■■□□□ 1.51
CTSB-233ENST00000534636 USP16Q9Y5T5 823 aa24.49■■□□□ 1.51
CTSB-233ENST00000534636 LAMB4A4D0S4 1761 aa24.49■■□□□ 1.51
CTSB-233ENST00000534636 RASSF7Q02833 373 aa24.48■■□□□ 1.51
CTSB-233ENST00000534636 PRR5LQ6MZQ0 368 aa24.48■■□□□ 1.51
CTSB-233ENST00000534636 ZC3H4Q9UPT8 1303 aaKnown RBP24.48■■□□□ 1.51
CTSB-233ENST00000534636 CCDC88AQ3V6T2 1871 aa24.47■■□□□ 1.51
CTSB-233ENST00000534636 COL11A2P13942 1736 aaPredicted RBP24.47■■□□□ 1.51
CTSB-233ENST00000534636 LMNB1P20700 586 aa24.47■■□□□ 1.51
CTSB-233ENST00000534636 TAF7Q15545 349 aaPredicted RBP24.47■■□□□ 1.51
CTSB-233ENST00000534636 ZNF622Q969S3 477 aaKnown RBP eCLIP24.47■■□□□ 1.51
CTSB-233ENST00000534636 PNNQ9H307 717 aaKnown RBP24.47■■□□□ 1.51
CTSB-233ENST00000534636 MAPK8IP3Q9UPT6 1336 aa24.46■■□□□ 1.51
CTSB-233ENST00000534636 PRAMEF22A3QJZ6 481 aa24.46■■□□□ 1.51
CTSB-233ENST00000534636 PIP4K2AP48426 406 aaPredicted RBP24.46■■□□□ 1.51
CTSB-233ENST00000534636 TIAM2Q8IVF5 1701 aa24.46■■□□□ 1.51
CTSB-233ENST00000534636 CACNA1SQ13698 1873 aa24.45■■□□□ 1.5
CTSB-233ENST00000534636 KDM3BQ7LBC6 1761 aa24.44■■□□□ 1.5
CTSB-233ENST00000534636 CLEC4GQ6UXB4 293 aa24.44■■□□□ 1.5
CTSB-233ENST00000534636 CCDC24Q8N4L8 307 aa24.44■■□□□ 1.5
CTSB-233ENST00000534636 PNISRQ8TF01 805 aaKnown RBP24.44■■□□□ 1.5
CTSB-233ENST00000534636 APLP1P51693 650 aa24.43■■□□□ 1.5
CTSB-233ENST00000534636 RBM46Q8TBY0 533 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms