RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 COL15A1P39059 1388 aa28.65■■■□□ 2.18
GSDMD-216ENST00000534602 TM4SF1P30408 202 aa28.65■■■□□ 2.18
GSDMD-216ENST00000534602 USPL1Q5W0Q7 1092 aa28.65■■■□□ 2.18
GSDMD-216ENST00000534602 DDR1Q08345 913 aa28.64■■■□□ 2.18
GSDMD-216ENST00000534602 A0A0G2JLW4 131 aa28.63■■■□□ 2.17
GSDMD-216ENST00000534602 HTATSF1O43719 755 aaKnown RBP28.63■■■□□ 2.17
GSDMD-216ENST00000534602 RTF1Q92541 710 aaKnown RBP28.63■■■□□ 2.17
GSDMD-216ENST00000534602 FMNL2Q96PY5 1086 aa28.63■■■□□ 2.17
GSDMD-216ENST00000534602 BTBD11A6QL63 1104 aa28.62■■■□□ 2.17
GSDMD-216ENST00000534602 WWC3Q9ULE0 1092 aa28.62■■■□□ 2.17
GSDMD-216ENST00000534602 N4BP2Q86UW6 1770 aaPredicted RBP28.61■■■□□ 2.17
GSDMD-216ENST00000534602 POLRMTO00411 1230 aaKnown RBP28.61■■■□□ 2.17
GSDMD-216ENST00000534602 DPEP1P16444 411 aa28.61■■■□□ 2.17
GSDMD-216ENST00000534602 EIF5P55010 431 aaKnown RBP28.61■■■□□ 2.17
GSDMD-216ENST00000534602 A0A087WZG4 1122 aa28.6■■■□□ 2.17
GSDMD-216ENST00000534602 CANXP27824 592 aaKnown RBP28.6■■■□□ 2.17
GSDMD-216ENST00000534602 ADCY9O60503 1353 aa28.58■■■□□ 2.17
GSDMD-216ENST00000534602 KCNA3P22001 575 aa28.57■■■□□ 2.16
GSDMD-216ENST00000534602 MCM10Q7L590 875 aa28.57■■■□□ 2.16
GSDMD-216ENST00000534602 BCL2L12Q9HB09 334 aa28.57■■■□□ 2.16
GSDMD-216ENST00000534602 BCS1LQ9Y276 419 aa28.57■■■□□ 2.16
GSDMD-216ENST00000534602 NEFMP07197 916 aa28.56■■■□□ 2.16
GSDMD-216ENST00000534602 NFIXQ14938 502 aa28.56■■■□□ 2.16
GSDMD-216ENST00000534602 ATP10DQ9P241 1426 aa28.56■■■□□ 2.16
GSDMD-216ENST00000534602 IL6STP40189 918 aaPredicted RBP28.55■■■□□ 2.16
GSDMD-216ENST00000534602 BRCA1P38398 1863 aaKnown RBP28.55■■■□□ 2.16
GSDMD-216ENST00000534602 KCNQ3O43525 872 aa28.54■■■□□ 2.16
GSDMD-216ENST00000534602 GIGYF1O75420 1035 aaPredicted RBP28.54■■■□□ 2.16
GSDMD-216ENST00000534602 C1QTNF8P60827 252 aa28.54■■■□□ 2.16
GSDMD-216ENST00000534602 RALBP1Q15311 655 aa28.54■■■□□ 2.16
GSDMD-216ENST00000534602 PIM2Q9P1W9 311 aa28.54■■■□□ 2.16
GSDMD-216ENST00000534602 PNNQ9H307 717 aaKnown RBP28.53■■■□□ 2.16
GSDMD-216ENST00000534602 PLEKHF1Q96S99 279 aa28.51■■■□□ 2.15
GSDMD-216ENST00000534602 NRXN2Q9P2S2 1712 aa28.51■■■□□ 2.15
GSDMD-216ENST00000534602 A1BGP04217 495 aa28.5■■■□□ 2.15
GSDMD-216ENST00000534602 SNRPA1P09661 255 aaKnown RBP28.5■■■□□ 2.15
GSDMD-216ENST00000534602 DCTN1Q14203 1278 aa28.5■■■□□ 2.15
GSDMD-216ENST00000534602 TAF7Q15545 349 aaPredicted RBP28.5■■■□□ 2.15
GSDMD-216ENST00000534602 NPM2Q86SE8 214 aaKnown RBP28.5■■■□□ 2.15
GSDMD-216ENST00000534602 SERPINB2P05120 415 aa28.49■■■□□ 2.15
GSDMD-216ENST00000534602 DALRD3Q5D0E6 543 aaKnown RBP28.49■■■□□ 2.15
GSDMD-216ENST00000534602 AFDNP55196 1824 aaKnown RBP28.48■■■□□ 2.15
GSDMD-216ENST00000534602 USP16Q9Y5T5 823 aa28.48■■■□□ 2.15
GSDMD-216ENST00000534602 ARFGEF1Q9Y6D6 1849 aa28.48■■■□□ 2.15
GSDMD-216ENST00000534602 ARHGAP27Q6ZUM4 889 aa28.47■■■□□ 2.15
GSDMD-216ENST00000534602 GPBP1L1Q9HC44 474 aaPredicted RBP28.47■■■□□ 2.15
GSDMD-216ENST00000534602 CHRNA5P30532 468 aa28.46■■■□□ 2.15
GSDMD-216ENST00000534602 NFE2L2Q16236 605 aa28.46■■■□□ 2.15
GSDMD-216ENST00000534602 TBC1D2BQ9UPU7 963 aa28.46■■■□□ 2.15
GSDMD-216ENST00000534602 ZNF330Q9Y3S2 320 aaPredicted RBP28.46■■■□□ 2.15
GSDMD-216ENST00000534602 SCN7AQ01118 1682 aa28.45■■■□□ 2.15
GSDMD-216ENST00000534602 PNISRQ8TF01 805 aaKnown RBP28.45■■■□□ 2.14
GSDMD-216ENST00000534602 DDX10Q13206 875 aaKnown RBP28.44■■■□□ 2.14
GSDMD-216ENST00000534602 MAPK8IP3Q9UPT6 1336 aa28.43■■■□□ 2.14
GSDMD-216ENST00000534602 TBC1D9BQ66K14 1250 aa28.43■■■□□ 2.14
GSDMD-216ENST00000534602 DLG5Q8TDM6 1919 aa28.43■■■□□ 2.14
GSDMD-216ENST00000534602 CAMTA2O94983 1202 aa28.42■■■□□ 2.14
GSDMD-216ENST00000534602 BICDL1Q6ZP65 573 aa28.42■■■□□ 2.14
GSDMD-216ENST00000534602 CARMIL3Q8ND23 1372 aa28.41■■■□□ 2.14
GSDMD-216ENST00000534602 PRAMEF22A3QJZ6 481 aa28.41■■■□□ 2.14
GSDMD-216ENST00000534602 DZIP3Q86Y13 1208 aaKnown RBP28.4■■■□□ 2.14
GSDMD-216ENST00000534602 PDZRN3Q9UPQ7 1066 aa28.4■■■□□ 2.14
GSDMD-216ENST00000534602 RGL2O15211 777 aa28.39■■■□□ 2.14
GSDMD-216ENST00000534602 SETDB2Q96T68 719 aa28.39■■■□□ 2.14
GSDMD-216ENST00000534602 MYBBP1AQ9BQG0 1328 aaKnown RBP28.39■■■□□ 2.13
GSDMD-216ENST00000534602 CLEC4GQ6UXB4 293 aa28.38■■■□□ 2.13
GSDMD-216ENST00000534602 ZNF526Q8TF50 670 aaPredicted RBP28.38■■■□□ 2.13
GSDMD-216ENST00000534602 MIS18AQ9NYP9 233 aa28.38■■■□□ 2.13
GSDMD-216ENST00000534602 H0YIN7 160 aa28.37■■■□□ 2.13
GSDMD-216ENST00000534602 C2CD5Q86YS7 1000 aa28.37■■■□□ 2.13
GSDMD-216ENST00000534602 BRIP1Q9BX63 1249 aa28.37■■■□□ 2.13
GSDMD-216ENST00000534602 DLEC1Q9Y238 1755 aa28.37■■■□□ 2.13
GSDMD-216ENST00000534602 BCORQ6W2J9 1755 aa28.36■■■□□ 2.13
GSDMD-216ENST00000534602 KDM3BQ7LBC6 1761 aa28.35■■■□□ 2.13
GSDMD-216ENST00000534602 NBPF26B4DH59 902 aa28.35■■■□□ 2.13
GSDMD-216ENST00000534602 PDE6BP35913 854 aa28.35■■■□□ 2.13
GSDMD-216ENST00000534602 PIP4K2AP48426 406 aaPredicted RBP28.35■■■□□ 2.13
GSDMD-216ENST00000534602 PRR5LQ6MZQ0 368 aa28.35■■■□□ 2.13
GSDMD-216ENST00000534602 NBPF10Q6P3W6 841 aaKnown RBP28.35■■■□□ 2.13
GSDMD-216ENST00000534602 NBPF15Q8N660 670 aa28.35■■■□□ 2.13
GSDMD-216ENST00000534602 TTLL6Q8N841 843 aa28.35■■■□□ 2.13
GSDMD-216ENST00000534602 ZNF652Q9Y2D9 606 aa28.35■■■□□ 2.13
GSDMD-216ENST00000534602 SENP3-EIF4A1A0A087X0R7 540 aa28.34■■■□□ 2.13
GSDMD-216ENST00000534602 EIF4A1P60842 406 aaKnown RBP28.33■■■□□ 2.13
GSDMD-216ENST00000534602 C9orf131Q5VYM1 1079 aa28.33■■■□□ 2.13
GSDMD-216ENST00000534602 CNBD1Q8NA66 436 aa28.32■■■□□ 2.12
GSDMD-216ENST00000534602 THUMPD2Q9BTF0 503 aaKnown RBP28.32■■■□□ 2.12
GSDMD-216ENST00000534602 LAMB4A4D0S4 1761 aa28.32■■■□□ 2.12
GSDMD-216ENST00000534602 ANKRD31Q8N7Z5 1873 aa28.3■■■□□ 2.12
GSDMD-216ENST00000534602 RIPK4P57078 832 aa28.3■■■□□ 2.12
GSDMD-216ENST00000534602 KIF3CO14782 793 aa28.29■■■□□ 2.12
GSDMD-216ENST00000534602 ST5P78524 1137 aa28.29■■■□□ 2.12
GSDMD-216ENST00000534602 LMOD3Q0VAK6 560 aa28.29■■■□□ 2.12
GSDMD-216ENST00000534602 BABAM1Q9NWV8 329 aa28.29■■■□□ 2.12
GSDMD-216ENST00000534602 NPHP1O15259 732 aa28.27■■■□□ 2.12
GSDMD-216ENST00000534602 TMPOP42166 694 aaKnown RBP28.27■■■□□ 2.12
GSDMD-216ENST00000534602 RNF181Q9P0P0 153 aa28.27■■■□□ 2.12
GSDMD-216ENST00000534602 SBF1O95248 1867 aa28.26■■■□□ 2.11
GSDMD-216ENST00000534602 ZC3H4Q9UPT8 1303 aaKnown RBP28.25■■■□□ 2.11
GSDMD-216ENST00000534602 NBPF5PQ86XG9 351 aaPredicted RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms