RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 FMNL2Q96PY5 1086 aa24.43■■□□□ 1.5
VPS51-215ENST00000534557 ZBTB1Q9Y2K1 713 aa24.43■■□□□ 1.5
VPS51-215ENST00000534557 BTBD11A6QL63 1104 aa24.42■■□□□ 1.5
VPS51-215ENST00000534557 TM4SF1P30408 202 aa24.42■■□□□ 1.5
VPS51-215ENST00000534557 PHACTR3Q96KR7 559 aa24.42■■□□□ 1.5
VPS51-215ENST00000534557 PXDNLA1KZ92 1463 aa24.42■■□□□ 1.5
VPS51-215ENST00000534557 COL15A1P39059 1388 aa24.42■■□□□ 1.5
VPS51-215ENST00000534557 SENP3-EIF4A1A0A087X0R7 540 aa24.41■■□□□ 1.5
VPS51-215ENST00000534557 ZNF496Q96IT1 587 aaPredicted RBP24.41■■□□□ 1.5
VPS51-215ENST00000534557 ATP10DQ9P241 1426 aa24.41■■□□□ 1.5
VPS51-215ENST00000534557 C4AP0C0L4 1744 aa24.4■■□□□ 1.5
VPS51-215ENST00000534557 POLRMTO00411 1230 aaKnown RBP24.39■■□□□ 1.49
VPS51-215ENST00000534557 DDR1Q08345 913 aa24.39■■□□□ 1.49
VPS51-215ENST00000534557 DALRD3Q5D0E6 543 aaKnown RBP24.39■■□□□ 1.49
VPS51-215ENST00000534557 HEG1Q9ULI3 1381 aa24.39■■□□□ 1.49
VPS51-215ENST00000534557 TJP1Q07157 1748 aa24.38■■□□□ 1.49
VPS51-215ENST00000534557 ZNF526Q8TF50 670 aaPredicted RBP24.38■■□□□ 1.49
VPS51-215ENST00000534557 KCPQ6ZWJ8 1503 aa24.38■■□□□ 1.49
VPS51-215ENST00000534557 HTATSF1O43719 755 aaKnown RBP24.37■■□□□ 1.49
VPS51-215ENST00000534557 PNNQ9H307 717 aaKnown RBP24.37■■□□□ 1.49
VPS51-215ENST00000534557 ZNF330Q9Y3S2 320 aaPredicted RBP24.37■■□□□ 1.49
VPS51-215ENST00000534557 EIF5P55010 431 aaKnown RBP24.36■■□□□ 1.49
VPS51-215ENST00000534557 NFIXQ14938 502 aa24.36■■□□□ 1.49
VPS51-215ENST00000534557 CEMIPQ8WUJ3 1361 aa24.36■■□□□ 1.49
VPS51-215ENST00000534557 ADAMTS7Q9UKP4 1686 aa24.36■■□□□ 1.49
VPS51-215ENST00000534557 KCNA3P22001 575 aa24.35■■□□□ 1.49
VPS51-215ENST00000534557 KIF13BQ9NQT8 1826 aa24.34■■□□□ 1.49
VPS51-215ENST00000534557 SERPINB2P05120 415 aa24.34■■□□□ 1.49
VPS51-215ENST00000534557 IL6STP40189 918 aaPredicted RBP24.34■■□□□ 1.49
VPS51-215ENST00000534557 ADCY9O60503 1353 aa24.33■■□□□ 1.49
VPS51-215ENST00000534557 BICDL1Q6ZP65 573 aa24.32■■□□□ 1.48
VPS51-215ENST00000534557 MCM10Q7L590 875 aa24.32■■□□□ 1.48
VPS51-215ENST00000534557 SNRPA1P09661 255 aaKnown RBP24.31■■□□□ 1.48
VPS51-215ENST00000534557 CHRNA5P30532 468 aa24.31■■□□□ 1.48
VPS51-215ENST00000534557 N4BP2Q86UW6 1770 aaPredicted RBP24.3■■□□□ 1.48
VPS51-215ENST00000534557 H0YIN7 160 aa24.3■■□□□ 1.48
VPS51-215ENST00000534557 NPHP1O15259 732 aa24.3■■□□□ 1.48
VPS51-215ENST00000534557 TAF7Q15545 349 aaPredicted RBP24.3■■□□□ 1.48
VPS51-215ENST00000534557 TBC1D2BQ9UPU7 963 aa24.3■■□□□ 1.48
VPS51-215ENST00000534557 VIRMAQ69YN4 1812 aaKnown RBP24.29■■□□□ 1.48
VPS51-215ENST00000534557 A1BGP04217 495 aa24.29■■□□□ 1.48
VPS51-215ENST00000534557 BCL2L12Q9HB09 334 aa24.29■■□□□ 1.48
VPS51-215ENST00000534557 PDZRN3Q9UPQ7 1066 aa24.29■■□□□ 1.48
VPS51-215ENST00000534557 SETDB2Q96T68 719 aa24.28■■□□□ 1.48
VPS51-215ENST00000534557 KCNQ3O43525 872 aa24.27■■□□□ 1.48
VPS51-215ENST00000534557 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
VPS51-215ENST00000534557 PDE6BP35913 854 aa24.26■■□□□ 1.47
VPS51-215ENST00000534557 C9orf131Q5VYM1 1079 aa24.26■■□□□ 1.47
VPS51-215ENST00000534557 C2CD5Q86YS7 1000 aa24.26■■□□□ 1.47
VPS51-215ENST00000534557 TTLL6Q8N841 843 aa24.26■■□□□ 1.47
VPS51-215ENST00000534557 UBR2Q8IWV8 1755 aa24.26■■□□□ 1.47
VPS51-215ENST00000534557 DCTN1Q14203 1278 aa24.25■■□□□ 1.47
VPS51-215ENST00000534557 RALBP1Q15311 655 aa24.25■■□□□ 1.47
VPS51-215ENST00000534557 TBC1D9BQ66K14 1250 aa24.25■■□□□ 1.47
VPS51-215ENST00000534557 DZIP3Q86Y13 1208 aaKnown RBP24.25■■□□□ 1.47
VPS51-215ENST00000534557 ZNF652Q9Y2D9 606 aa24.25■■□□□ 1.47
VPS51-215ENST00000534557 USP16Q9Y5T5 823 aa24.25■■□□□ 1.47
VPS51-215ENST00000534557 MAPK8IP3Q9UPT6 1336 aa24.25■■□□□ 1.47
VPS51-215ENST00000534557 BRIP1Q9BX63 1249 aa24.23■■□□□ 1.47
VPS51-215ENST00000534557 CARMIL3Q8ND23 1372 aa24.23■■□□□ 1.47
VPS51-215ENST00000534557 CLEC4GQ6UXB4 293 aa24.22■■□□□ 1.47
VPS51-215ENST00000534557 RNF181Q9P0P0 153 aa24.22■■□□□ 1.47
VPS51-215ENST00000534557 KIAA1551Q9HCM1 1747 aa24.21■■□□□ 1.47
VPS51-215ENST00000534557 ST5P78524 1137 aa24.21■■□□□ 1.47
VPS51-215ENST00000534557 C16orf71Q8IYS4 520 aaPredicted RBP24.21■■□□□ 1.47
VPS51-215ENST00000534557 ZNF622Q969S3 477 aaKnown RBP eCLIP24.21■■□□□ 1.47
VPS51-215ENST00000534557 KDM2BQ8NHM5 1336 aa24.2■■□□□ 1.46
VPS51-215ENST00000534557 CAMTA2O94983 1202 aa24.2■■□□□ 1.46
VPS51-215ENST00000534557 NFE2L2Q16236 605 aa24.2■■□□□ 1.46
VPS51-215ENST00000534557 CNBD1Q8NA66 436 aa24.2■■□□□ 1.46
VPS51-215ENST00000534557 SIPA1L3O60292 1781 aaPredicted RBP24.19■■□□□ 1.46
VPS51-215ENST00000534557 KIF3CO14782 793 aa24.18■■□□□ 1.46
VPS51-215ENST00000534557 TOMM70O94826 608 aa24.18■■□□□ 1.46
VPS51-215ENST00000534557 HSPA6P17066 643 aa24.17■■□□□ 1.46
VPS51-215ENST00000534557 PRR5LQ6MZQ0 368 aa24.17■■□□□ 1.46
VPS51-215ENST00000534557 PLEKHF1Q96S99 279 aa24.17■■□□□ 1.46
VPS51-215ENST00000534557 MIS18AQ9NYP9 233 aa24.17■■□□□ 1.46
VPS51-215ENST00000534557 PRAMEF22A3QJZ6 481 aa24.16■■□□□ 1.46
VPS51-215ENST00000534557 RGL2O15211 777 aa24.16■■□□□ 1.46
VPS51-215ENST00000534557 LMNB1P20700 586 aa24.16■■□□□ 1.46
VPS51-215ENST00000534557 PIP4K2AP48426 406 aaPredicted RBP24.16■■□□□ 1.46
VPS51-215ENST00000534557 NBPF5PQ86XG9 351 aaPredicted RBP24.16■■□□□ 1.46
VPS51-215ENST00000534557 ARFGEF1Q9Y6D6 1849 aa24.15■■□□□ 1.46
VPS51-215ENST00000534557 DDX10Q13206 875 aaKnown RBP24.15■■□□□ 1.46
VPS51-215ENST00000534557 TPTE2Q6XPS3 522 aa24.15■■□□□ 1.46
VPS51-215ENST00000534557 CNKSR1Q969H4 720 aa24.15■■□□□ 1.46
VPS51-215ENST00000534557 BRCA1P38398 1863 aaKnown RBP24.15■■□□□ 1.46
VPS51-215ENST00000534557 ZC3H4Q9UPT8 1303 aaKnown RBP24.13■■□□□ 1.45
VPS51-215ENST00000534557 AFDNP55196 1824 aaKnown RBP24.12■■□□□ 1.45
VPS51-215ENST00000534557 GTF2E1P29083 439 aaPredicted RBP24.12■■□□□ 1.45
VPS51-215ENST00000534557 LMOD3Q0VAK6 560 aa24.12■■□□□ 1.45
VPS51-215ENST00000534557 CCDC24Q8N4L8 307 aa24.12■■□□□ 1.45
VPS51-215ENST00000534557 NMRK2Q9NPI5 230 aa24.12■■□□□ 1.45
VPS51-215ENST00000534557 NIP7Q9Y221 180 aaKnown RBP eCLIP24.12■■□□□ 1.45
VPS51-215ENST00000534557 NRXN2Q9P2S2 1712 aa24.12■■□□□ 1.45
VPS51-215ENST00000534557 RIPK4P57078 832 aa24.11■■□□□ 1.45
VPS51-215ENST00000534557 SOGA3Q5TF21 947 aa24.11■■□□□ 1.45
VPS51-215ENST00000534557 STYK1Q6J9G0 422 aa24.11■■□□□ 1.45
VPS51-215ENST00000534557 NBPF26B4DH59 902 aa24.1■■□□□ 1.45
VPS51-215ENST00000534557 RASSF7Q02833 373 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms