RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 TNRC6CQ9HCJ0 1690 aaKnown RBP21.71■■□□□ 1.07
RPS3-220ENST00000534555 CAPN15O75808 1086 aa21.7■■□□□ 1.06
RPS3-220ENST00000534555 SLC52A2Q9HAB3 445 aa21.7■■□□□ 1.06
RPS3-220ENST00000534555 AFDNP55196 1824 aaKnown RBP21.7■■□□□ 1.06
RPS3-220ENST00000534555 CYP19A1P11511 503 aaPredicted RBP21.69■■□□□ 1.06
RPS3-220ENST00000534555 AKAP4Q5JQC9 854 aa21.69■■□□□ 1.06
RPS3-220ENST00000534555 BCL2L12Q9HB09 334 aa21.69■■□□□ 1.06
RPS3-220ENST00000534555 NARFQ9UHQ1 456 aa21.69■■□□□ 1.06
RPS3-220ENST00000534555 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
RPS3-220ENST00000534555 HSPA5P11021 654 aaKnown RBP21.68■■□□□ 1.06
RPS3-220ENST00000534555 ZBTB1Q9Y2K1 713 aa21.68■■□□□ 1.06
RPS3-220ENST00000534555 SERPINB2P05120 415 aa21.67■■□□□ 1.06
RPS3-220ENST00000534555 COL15A1P39059 1388 aa21.66■■□□□ 1.06
RPS3-220ENST00000534555 GLTPD2A6NH11 291 aa21.66■■□□□ 1.06
RPS3-220ENST00000534555 RNMTO43148 476 aaKnown RBP21.66■■□□□ 1.06
RPS3-220ENST00000534555 LMNB1P20700 586 aa21.66■■□□□ 1.06
RPS3-220ENST00000534555 VEGFAP15692 232 aaPredicted RBP21.65■■□□□ 1.06
RPS3-220ENST00000534555 C2CD5Q86YS7 1000 aa21.65■■□□□ 1.06
RPS3-220ENST00000534555 NRXN2Q9P2S2 1712 aa21.64■■□□□ 1.06
RPS3-220ENST00000534555 ZC3H4Q9UPT8 1303 aaKnown RBP21.64■■□□□ 1.05
RPS3-220ENST00000534555 EIF4G2P78344 907 aaKnown RBP eCLIP21.64■■□□□ 1.05
RPS3-220ENST00000534555 TNS4Q8IZW8 715 aa21.64■■□□□ 1.05
RPS3-220ENST00000534555 TTLL6Q8N841 843 aa21.64■■□□□ 1.05
RPS3-220ENST00000534555 CARMIL3Q8ND23 1372 aa21.63■■□□□ 1.05
RPS3-220ENST00000534555 CCDC88AQ3V6T2 1871 aa21.63■■□□□ 1.05
RPS3-220ENST00000534555 HMOX1P09601 288 aa21.63■■□□□ 1.05
RPS3-220ENST00000534555 CANXP27824 592 aaKnown RBP21.63■■□□□ 1.05
RPS3-220ENST00000534555 BICDL1Q6ZP65 573 aa21.63■■□□□ 1.05
RPS3-220ENST00000534555 NFKBIEO00221 500 aa21.62■■□□□ 1.05
RPS3-220ENST00000534555 DLEC1Q9Y238 1755 aa21.61■■□□□ 1.05
RPS3-220ENST00000534555 POTECB2RU33 542 aa21.61■■□□□ 1.05
RPS3-220ENST00000534555 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
RPS3-220ENST00000534555 MRC1P22897 1456 aa21.6■■□□□ 1.05
RPS3-220ENST00000534555 H0YIN7 160 aa21.6■■□□□ 1.05
RPS3-220ENST00000534555 HSPA1AP0DMV8 641 aaKnown RBP21.6■■□□□ 1.05
RPS3-220ENST00000534555 HSPA1BP0DMV9 641 aaKnown RBP21.6■■□□□ 1.05
RPS3-220ENST00000534555 MTHFSDQ2M296 383 aaKnown RBP21.6■■□□□ 1.05
RPS3-220ENST00000534555 ZNF219Q9P2Y4 722 aaPredicted RBP21.6■■□□□ 1.05
RPS3-220ENST00000534555 KNSTRNQ9Y448 316 aa21.6■■□□□ 1.05
RPS3-220ENST00000534555 TIAM2Q8IVF5 1701 aa21.59■■□□□ 1.05
RPS3-220ENST00000534555 VSIG10Q8N0Z9 540 aa21.58■■□□□ 1.05
RPS3-220ENST00000534555 CCDC24Q8N4L8 307 aa21.58■■□□□ 1.05
RPS3-220ENST00000534555 ZNF622Q969S3 477 aaKnown RBP eCLIP21.57■■□□□ 1.04
RPS3-220ENST00000534555 EIF5P55010 431 aaKnown RBP21.56■■□□□ 1.04
RPS3-220ENST00000534555 TBC1D9BQ66K14 1250 aa21.56■■□□□ 1.04
RPS3-220ENST00000534555 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
RPS3-220ENST00000534555 C21orf2O43822 256 aa21.55■■□□□ 1.04
RPS3-220ENST00000534555 AMER1Q5JTC6 1135 aaPredicted RBP21.55■■□□□ 1.04
RPS3-220ENST00000534555 ANKRD31Q8N7Z5 1873 aa21.54■■□□□ 1.04
RPS3-220ENST00000534555 DPY19L2Q6NUT2 758 aa21.54■■□□□ 1.04
RPS3-220ENST00000534555 TBC1D2BQ9UPU7 963 aa21.53■■□□□ 1.04
RPS3-220ENST00000534555 UBR2Q8IWV8 1755 aa21.52■■□□□ 1.04
RPS3-220ENST00000534555 STARD3NLO95772 234 aa21.52■■□□□ 1.04
RPS3-220ENST00000534555 ERFEQ4G0M1 354 aa21.52■■□□□ 1.04
RPS3-220ENST00000534555 TTC5Q8N0Z6 440 aa21.52■■□□□ 1.04
RPS3-220ENST00000534555 ZNF330Q9Y3S2 320 aaPredicted RBP21.52■■□□□ 1.04
RPS3-220ENST00000534555 PCNTO95613 3336 aa21.51■■□□□ 1.03
RPS3-220ENST00000534555 A0A087WZG4 1122 aa21.51■■□□□ 1.03
RPS3-220ENST00000534555 PRR5LQ6MZQ0 368 aa21.51■■□□□ 1.03
RPS3-220ENST00000534555 ZNF496Q96IT1 587 aaPredicted RBP21.51■■□□□ 1.03
RPS3-220ENST00000534555 BRIP1Q9BX63 1249 aa21.51■■□□□ 1.03
RPS3-220ENST00000534555 DIAPH1O60610 1272 aaKnown RBP21.5■■□□□ 1.03
RPS3-220ENST00000534555 POTEIP0CG38 1075 aa21.5■■□□□ 1.03
RPS3-220ENST00000534555 POTEJP0CG39 1038 aa21.5■■□□□ 1.03
RPS3-220ENST00000534555 PDE6BP35913 854 aa21.5■■□□□ 1.03
RPS3-220ENST00000534555 CLSPNQ9HAW4 1339 aa21.5■■□□□ 1.03
RPS3-220ENST00000534555 COL11A2P13942 1736 aaPredicted RBP21.49■■□□□ 1.03
RPS3-220ENST00000534555 MKRN1Q9UHC7 482 aaKnown RBP21.49■■□□□ 1.03
RPS3-220ENST00000534555 FER1L6Q2WGJ9 1857 aa21.49■■□□□ 1.03
RPS3-220ENST00000534555 DDNO94850 711 aaPredicted RBP21.48■■□□□ 1.03
RPS3-220ENST00000534555 IL17REQ8NFR9 667 aa21.48■■□□□ 1.03
RPS3-220ENST00000534555 DICER1Q9UPY3 1922 aaKnown RBP21.48■■□□□ 1.03
RPS3-220ENST00000534555 HEG1Q9ULI3 1381 aa21.48■■□□□ 1.03
RPS3-220ENST00000534555 A1BGP04217 495 aa21.47■■□□□ 1.03
RPS3-220ENST00000534555 CHADLQ6NUI6 762 aa21.47■■□□□ 1.03
RPS3-220ENST00000534555 ZNF790Q6PG37 636 aa21.47■■□□□ 1.03
RPS3-220ENST00000534555 PDZRN3Q9UPQ7 1066 aa21.47■■□□□ 1.03
RPS3-220ENST00000534555 CC2D1BQ5T0F9 858 aaKnown RBP21.46■■□□□ 1.03
RPS3-220ENST00000534555 TAOK3Q9H2K8 898 aa21.46■■□□□ 1.03
RPS3-220ENST00000534555 SLX4Q8IY92 1834 aa21.45■■□□□ 1.03
RPS3-220ENST00000534555 SCN7AQ01118 1682 aa21.45■■□□□ 1.02
RPS3-220ENST00000534555 IL6STP40189 918 aaPredicted RBP21.45■■□□□ 1.02
RPS3-220ENST00000534555 TEFQ10587 303 aa21.45■■□□□ 1.02
RPS3-220ENST00000534555 CREBZFQ9NS37 354 aa21.45■■□□□ 1.02
RPS3-220ENST00000534555 SETDB2Q96T68 719 aa21.44■■□□□ 1.02
RPS3-220ENST00000534555 TEX13AQ9BXU3 409 aaPredicted RBP21.44■■□□□ 1.02
RPS3-220ENST00000534555 LTBP3Q9NS15 1303 aa21.44■■□□□ 1.02
RPS3-220ENST00000534555 CACNA1SQ13698 1873 aa21.43■■□□□ 1.02
RPS3-220ENST00000534555 NPHP1O15259 732 aa21.43■■□□□ 1.02
RPS3-220ENST00000534555 KCNQ3O43525 872 aa21.43■■□□□ 1.02
RPS3-220ENST00000534555 CAMTA2O94983 1202 aa21.43■■□□□ 1.02
RPS3-220ENST00000534555 CNBD1Q8NA66 436 aa21.43■■□□□ 1.02
RPS3-220ENST00000534555 CNKSR1Q969H4 720 aa21.43■■□□□ 1.02
RPS3-220ENST00000534555 GNAT3A8MTJ3 354 aa21.42■■□□□ 1.02
RPS3-220ENST00000534555 U2SURPO15042 1029 aaKnown RBP21.42■■□□□ 1.02
RPS3-220ENST00000534555 PER1O15534 1290 aaPredicted RBP21.42■■□□□ 1.02
RPS3-220ENST00000534555 SRGNP10124 158 aa21.42■■□□□ 1.02
RPS3-220ENST00000534555 CNGB1Q14028 1251 aaPredicted RBP21.42■■□□□ 1.02
RPS3-220ENST00000534555 KIF7Q2M1P5 1343 aa21.42■■□□□ 1.02
RPS3-220ENST00000534555 STYK1Q6J9G0 422 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms