RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 DDX10Q13206 875 aaKnown RBP30.97■■■□□ 2.55
YIF1A-213ENST00000534374 FMNL2Q96PY5 1086 aa30.97■■■□□ 2.55
YIF1A-213ENST00000534374 NARFQ9UHQ1 456 aa30.97■■■□□ 2.55
YIF1A-213ENST00000534374 TM4SF1P30408 202 aa30.95■■■□□ 2.55
YIF1A-213ENST00000534374 PNNQ9H307 717 aaKnown RBP30.95■■■□□ 2.55
YIF1A-213ENST00000534374 USPL1Q5W0Q7 1092 aa30.94■■■□□ 2.54
YIF1A-213ENST00000534374 MCM10Q7L590 875 aa30.94■■■□□ 2.54
YIF1A-213ENST00000534374 KIF13BQ9NQT8 1826 aa30.94■■■□□ 2.54
YIF1A-213ENST00000534374 EIF5P55010 431 aaKnown RBP30.93■■■□□ 2.54
YIF1A-213ENST00000534374 COL15A1P39059 1388 aa30.92■■■□□ 2.54
YIF1A-213ENST00000534374 CANXP27824 592 aaKnown RBP30.92■■■□□ 2.54
YIF1A-213ENST00000534374 PLEKHF1Q96S99 279 aa30.92■■■□□ 2.54
YIF1A-213ENST00000534374 C10orf71Q711Q0 1435 aa30.91■■■□□ 2.54
YIF1A-213ENST00000534374 A0A087WZG4 1122 aa30.91■■■□□ 2.54
YIF1A-213ENST00000534374 KCNQ3O43525 872 aa30.91■■■□□ 2.54
YIF1A-213ENST00000534374 DDR1Q08345 913 aa30.9■■■□□ 2.54
YIF1A-213ENST00000534374 A0A0G2JLW4 131 aa30.88■■■□□ 2.53
YIF1A-213ENST00000534374 POLRMTO00411 1230 aaKnown RBP30.88■■■□□ 2.53
YIF1A-213ENST00000534374 C1QTNF8P60827 252 aa30.88■■■□□ 2.53
YIF1A-213ENST00000534374 DCTN1Q14203 1278 aa30.88■■■□□ 2.53
YIF1A-213ENST00000534374 TAF7Q15545 349 aaPredicted RBP30.88■■■□□ 2.53
YIF1A-213ENST00000534374 PXDNLA1KZ92 1463 aa30.88■■■□□ 2.53
YIF1A-213ENST00000534374 IL6STP40189 918 aaPredicted RBP30.87■■■□□ 2.53
YIF1A-213ENST00000534374 BCL2L12Q9HB09 334 aa30.86■■■□□ 2.53
YIF1A-213ENST00000534374 DPEP1P16444 411 aa30.85■■■□□ 2.53
YIF1A-213ENST00000534374 NFIXQ14938 502 aa30.85■■■□□ 2.53
YIF1A-213ENST00000534374 WWC3Q9ULE0 1092 aa30.85■■■□□ 2.53
YIF1A-213ENST00000534374 GIGYF1O75420 1035 aaPredicted RBP30.84■■■□□ 2.53
YIF1A-213ENST00000534374 SNRPA1P09661 255 aaKnown RBP30.84■■■□□ 2.53
YIF1A-213ENST00000534374 NFE2L2Q16236 605 aa30.84■■■□□ 2.53
YIF1A-213ENST00000534374 A1BGP04217 495 aa30.83■■■□□ 2.53
YIF1A-213ENST00000534374 USP16Q9Y5T5 823 aa30.83■■■□□ 2.53
YIF1A-213ENST00000534374 MYBBP1AQ9BQG0 1328 aaKnown RBP30.82■■■□□ 2.52
YIF1A-213ENST00000534374 KCNA3P22001 575 aa30.82■■■□□ 2.52
YIF1A-213ENST00000534374 NPM2Q86SE8 214 aaKnown RBP30.81■■■□□ 2.52
YIF1A-213ENST00000534374 PNISRQ8TF01 805 aaKnown RBP30.81■■■□□ 2.52
YIF1A-213ENST00000534374 KIAA1551Q9HCM1 1747 aa30.81■■■□□ 2.52
YIF1A-213ENST00000534374 MAPK8IP3Q9UPT6 1336 aa30.8■■■□□ 2.52
YIF1A-213ENST00000534374 N4BP2Q86UW6 1770 aaPredicted RBP30.8■■■□□ 2.52
YIF1A-213ENST00000534374 BCS1LQ9Y276 419 aa30.8■■■□□ 2.52
YIF1A-213ENST00000534374 PIM2Q9P1W9 311 aa30.79■■■□□ 2.52
YIF1A-213ENST00000534374 SERPINB2P05120 415 aa30.78■■■□□ 2.52
YIF1A-213ENST00000534374 TBC1D2BQ9UPU7 963 aa30.77■■■□□ 2.52
YIF1A-213ENST00000534374 DLG5Q8TDM6 1919 aa30.77■■■□□ 2.52
YIF1A-213ENST00000534374 ZNF330Q9Y3S2 320 aaPredicted RBP30.76■■■□□ 2.51
YIF1A-213ENST00000534374 SENP3-EIF4A1A0A087X0R7 540 aa30.75■■■□□ 2.51
YIF1A-213ENST00000534374 PRAMEF22A3QJZ6 481 aa30.75■■■□□ 2.51
YIF1A-213ENST00000534374 MIS18AQ9NYP9 233 aa30.75■■■□□ 2.51
YIF1A-213ENST00000534374 ZEB1P37275 1124 aaPredicted RBP30.73■■■□□ 2.51
YIF1A-213ENST00000534374 CAMTA2O94983 1202 aa30.72■■■□□ 2.51
YIF1A-213ENST00000534374 DALRD3Q5D0E6 543 aaKnown RBP30.72■■■□□ 2.51
YIF1A-213ENST00000534374 TBC1D9BQ66K14 1250 aa30.72■■■□□ 2.51
YIF1A-213ENST00000534374 BRCA1P38398 1863 aaKnown RBP30.72■■■□□ 2.51
YIF1A-213ENST00000534374 AFDNP55196 1824 aaKnown RBP30.71■■■□□ 2.51
YIF1A-213ENST00000534374 BICDL1Q6ZP65 573 aa30.71■■■□□ 2.51
YIF1A-213ENST00000534374 DZIP3Q86Y13 1208 aaKnown RBP30.71■■■□□ 2.51
YIF1A-213ENST00000534374 ATP10DQ9P241 1426 aa30.71■■■□□ 2.51
YIF1A-213ENST00000534374 NRXN2Q9P2S2 1712 aa30.7■■■□□ 2.51
YIF1A-213ENST00000534374 CHRNA5P30532 468 aa30.7■■■□□ 2.51
YIF1A-213ENST00000534374 RIPK4P57078 832 aa30.7■■■□□ 2.51
YIF1A-213ENST00000534374 ARHGAP27Q6ZUM4 889 aa30.7■■■□□ 2.51
YIF1A-213ENST00000534374 ADCY9O60503 1353 aa30.69■■■□□ 2.5
YIF1A-213ENST00000534374 CLEC4GQ6UXB4 293 aa30.69■■■□□ 2.5
YIF1A-213ENST00000534374 THUMPD2Q9BTF0 503 aaKnown RBP30.69■■■□□ 2.5
YIF1A-213ENST00000534374 PRKRIP1Q9H875 184 aaPredicted RBP30.69■■■□□ 2.5
YIF1A-213ENST00000534374 EIF4A1P60842 406 aaKnown RBP30.68■■■□□ 2.5
YIF1A-213ENST00000534374 SETDB2Q96T68 719 aa30.68■■■□□ 2.5
YIF1A-213ENST00000534374 NBPF26B4DH59 902 aa30.67■■■□□ 2.5
YIF1A-213ENST00000534374 RGL2O15211 777 aa30.67■■■□□ 2.5
YIF1A-213ENST00000534374 TMPOP42166 694 aaKnown RBP30.67■■■□□ 2.5
YIF1A-213ENST00000534374 PIP4K2AP48426 406 aaPredicted RBP30.67■■■□□ 2.5
YIF1A-213ENST00000534374 NBPF10Q6P3W6 841 aaKnown RBP30.67■■■□□ 2.5
YIF1A-213ENST00000534374 NBPF15Q8N660 670 aa30.67■■■□□ 2.5
YIF1A-213ENST00000534374 GPBP1L1Q9HC44 474 aaPredicted RBP30.67■■■□□ 2.5
YIF1A-213ENST00000534374 LMOD3Q0VAK6 560 aa30.66■■■□□ 2.5
YIF1A-213ENST00000534374 BABAM1Q9NWV8 329 aa30.65■■■□□ 2.5
YIF1A-213ENST00000534374 PDZRN3Q9UPQ7 1066 aa30.65■■■□□ 2.5
YIF1A-213ENST00000534374 CARMIL3Q8ND23 1372 aa30.65■■■□□ 2.5
YIF1A-213ENST00000534374 ARFGEF1Q9Y6D6 1849 aa30.64■■■□□ 2.5
YIF1A-213ENST00000534374 WDR43Q15061 677 aaKnown RBP eCLIP30.64■■■□□ 2.5
YIF1A-213ENST00000534374 BRIP1Q9BX63 1249 aa30.64■■■□□ 2.5
YIF1A-213ENST00000534374 H0YIN7 160 aa30.63■■■□□ 2.49
YIF1A-213ENST00000534374 ZNF652Q9Y2D9 606 aa30.63■■■□□ 2.49
YIF1A-213ENST00000534374 SCN7AQ01118 1682 aa30.62■■■□□ 2.49
YIF1A-213ENST00000534374 RUNDC1Q96C34 613 aa30.62■■■□□ 2.49
YIF1A-213ENST00000534374 KDM3BQ7LBC6 1761 aa30.61■■■□□ 2.49
YIF1A-213ENST00000534374 PDE6BP35913 854 aa30.61■■■□□ 2.49
YIF1A-213ENST00000534374 PRR5LQ6MZQ0 368 aa30.61■■■□□ 2.49
YIF1A-213ENST00000534374 C2CD5Q86YS7 1000 aa30.61■■■□□ 2.49
YIF1A-213ENST00000534374 TSPYL4Q9UJ04 414 aa30.6■■■□□ 2.49
YIF1A-213ENST00000534374 ADAMTS8Q9UP79 889 aa30.6■■■□□ 2.49
YIF1A-213ENST00000534374 TTLL6Q8N841 843 aa30.59■■■□□ 2.49
YIF1A-213ENST00000534374 CCDC146Q8IYE0 955 aa30.58■■■□□ 2.49
YIF1A-213ENST00000534374 CNBD1Q8NA66 436 aa30.57■■■□□ 2.48
YIF1A-213ENST00000534374 RRP7AQ9Y3A4 280 aaKnown RBP30.55■■■□□ 2.48
YIF1A-213ENST00000534374 BCORQ6W2J9 1755 aa30.55■■■□□ 2.48
YIF1A-213ENST00000534374 ERVV-1B6SEH8 477 aa30.54■■■□□ 2.48
YIF1A-213ENST00000534374 NPHP1O15259 732 aa30.54■■■□□ 2.48
YIF1A-213ENST00000534374 ST5P78524 1137 aa30.54■■■□□ 2.48
YIF1A-213ENST00000534374 NEUROD2Q15784 382 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms