RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 SOS1Q07889 1333 aaPredicted RBP25.14■■□□□ 1.62
LRRK1-210ENST00000534045 MAPK8IP3Q9UPT6 1336 aa25.14■■□□□ 1.62
LRRK1-210ENST00000534045 USPL1Q5W0Q7 1092 aa25.14■■□□□ 1.62
LRRK1-210ENST00000534045 CEMIPQ8WUJ3 1361 aa25.14■■□□□ 1.61
LRRK1-210ENST00000534045 A0A087WZG4 1122 aa25.13■■□□□ 1.61
LRRK1-210ENST00000534045 ZNF330Q9Y3S2 320 aaPredicted RBP25.13■■□□□ 1.61
LRRK1-210ENST00000534045 HEG1Q9ULI3 1381 aa25.13■■□□□ 1.61
LRRK1-210ENST00000534045 DCTN1Q14203 1278 aa25.12■■□□□ 1.61
LRRK1-210ENST00000534045 NARFQ9UHQ1 456 aa25.12■■□□□ 1.61
LRRK1-210ENST00000534045 KCPQ6ZWJ8 1503 aa25.12■■□□□ 1.61
LRRK1-210ENST00000534045 ZEB1P37275 1124 aaPredicted RBP25.11■■□□□ 1.61
LRRK1-210ENST00000534045 ZNF784Q8NCA9 323 aaPredicted RBP25.11■■□□□ 1.61
LRRK1-210ENST00000534045 TAF7Q15545 349 aaPredicted RBP25.1■■□□□ 1.61
LRRK1-210ENST00000534045 DLG5Q8TDM6 1919 aa25.1■■□□□ 1.61
LRRK1-210ENST00000534045 COL15A1P39059 1388 aa25.09■■□□□ 1.61
LRRK1-210ENST00000534045 A0A0G2JLW4 131 aa25.09■■□□□ 1.61
LRRK1-210ENST00000534045 KCNQ3O43525 872 aa25.09■■□□□ 1.61
LRRK1-210ENST00000534045 SNRPA1P09661 255 aaKnown RBP25.07■■□□□ 1.6
LRRK1-210ENST00000534045 MYBBP1AQ9BQG0 1328 aaKnown RBP25.07■■□□□ 1.6
LRRK1-210ENST00000534045 TM4SF1P30408 202 aa25.06■■□□□ 1.6
LRRK1-210ENST00000534045 EIF5P55010 431 aaKnown RBP25.06■■□□□ 1.6
LRRK1-210ENST00000534045 NFE2L2Q16236 605 aa25.06■■□□□ 1.6
LRRK1-210ENST00000534045 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
LRRK1-210ENST00000534045 PLEKHF1Q96S99 279 aa25.06■■□□□ 1.6
LRRK1-210ENST00000534045 BCS1LQ9Y276 419 aa25.06■■□□□ 1.6
LRRK1-210ENST00000534045 KIF13BQ9NQT8 1826 aa25.05■■□□□ 1.6
LRRK1-210ENST00000534045 A1BGP04217 495 aa25.05■■□□□ 1.6
LRRK1-210ENST00000534045 DPEP1P16444 411 aa25.05■■□□□ 1.6
LRRK1-210ENST00000534045 IL6STP40189 918 aaPredicted RBP25.05■■□□□ 1.6
LRRK1-210ENST00000534045 DDR1Q08345 913 aa25.05■■□□□ 1.6
LRRK1-210ENST00000534045 BICDL1Q6ZP65 573 aa25.04■■□□□ 1.6
LRRK1-210ENST00000534045 UTRNP46939 3433 aa25.03■■□□□ 1.6
LRRK1-210ENST00000534045 POLRMTO00411 1230 aaKnown RBP25.03■■□□□ 1.6
LRRK1-210ENST00000534045 NFIXQ14938 502 aa25.03■■□□□ 1.6
LRRK1-210ENST00000534045 MIS18AQ9NYP9 233 aa25.03■■□□□ 1.6
LRRK1-210ENST00000534045 TBC1D2BQ9UPU7 963 aa25.03■■□□□ 1.6
LRRK1-210ENST00000534045 USP16Q9Y5T5 823 aa25.03■■□□□ 1.6
LRRK1-210ENST00000534045 WDR43Q15061 677 aaKnown RBP eCLIP25.02■■□□□ 1.6
LRRK1-210ENST00000534045 C10orf71Q711Q0 1435 aa25.02■■□□□ 1.6
LRRK1-210ENST00000534045 SERPINB2P05120 415 aa25.01■■□□□ 1.59
LRRK1-210ENST00000534045 PIM2Q9P1W9 311 aa25.01■■□□□ 1.59
LRRK1-210ENST00000534045 RIPK4P57078 832 aa25■■□□□ 1.59
LRRK1-210ENST00000534045 PXDNLA1KZ92 1463 aa24.99■■□□□ 1.59
LRRK1-210ENST00000534045 NPHP1O15259 732 aa24.99■■□□□ 1.59
LRRK1-210ENST00000534045 ARHGAP27Q6ZUM4 889 aa24.99■■□□□ 1.59
LRRK1-210ENST00000534045 N4BP2Q86UW6 1770 aaPredicted RBP24.99■■□□□ 1.59
LRRK1-210ENST00000534045 BCL2L12Q9HB09 334 aa24.99■■□□□ 1.59
LRRK1-210ENST00000534045 PRAMEF22A3QJZ6 481 aa24.97■■□□□ 1.59
LRRK1-210ENST00000534045 LMOD3Q0VAK6 560 aa24.97■■□□□ 1.59
LRRK1-210ENST00000534045 DALRD3Q5D0E6 543 aaKnown RBP24.97■■□□□ 1.59
LRRK1-210ENST00000534045 DZIP3Q86Y13 1208 aaKnown RBP24.97■■□□□ 1.59
LRRK1-210ENST00000534045 THUMPD2Q9BTF0 503 aaKnown RBP24.97■■□□□ 1.59
LRRK1-210ENST00000534045 KIAA1551Q9HCM1 1747 aa24.96■■□□□ 1.59
LRRK1-210ENST00000534045 PIP4K2AP48426 406 aaPredicted RBP24.96■■□□□ 1.59
LRRK1-210ENST00000534045 SETDB2Q96T68 719 aa24.96■■□□□ 1.59
LRRK1-210ENST00000534045 GOLGB1Q14789 3259 aaKnown RBP24.95■■□□□ 1.58
LRRK1-210ENST00000534045 CHRNA5P30532 468 aa24.95■■□□□ 1.58
LRRK1-210ENST00000534045 TBC1D9BQ66K14 1250 aa24.95■■□□□ 1.58
LRRK1-210ENST00000534045 NEUROD2Q15784 382 aa24.94■■□□□ 1.58
LRRK1-210ENST00000534045 PRKRIP1Q9H875 184 aaPredicted RBP24.94■■□□□ 1.58
LRRK1-210ENST00000534045 KCNA3P22001 575 aa24.93■■□□□ 1.58
LRRK1-210ENST00000534045 CCDC146Q8IYE0 955 aa24.93■■□□□ 1.58
LRRK1-210ENST00000534045 ZNF652Q9Y2D9 606 aa24.93■■□□□ 1.58
LRRK1-210ENST00000534045 SCN7AQ01118 1682 aa24.93■■□□□ 1.58
LRRK1-210ENST00000534045 LAMB4A4D0S4 1761 aa24.93■■□□□ 1.58
LRRK1-210ENST00000534045 AFDNP55196 1824 aaKnown RBP24.92■■□□□ 1.58
LRRK1-210ENST00000534045 TMPOP42166 694 aaKnown RBP24.92■■□□□ 1.58
LRRK1-210ENST00000534045 TSPYL4Q9UJ04 414 aa24.92■■□□□ 1.58
LRRK1-210ENST00000534045 KDM3BQ7LBC6 1761 aa24.92■■□□□ 1.58
LRRK1-210ENST00000534045 BRCA1P38398 1863 aaKnown RBP24.92■■□□□ 1.58
LRRK1-210ENST00000534045 H0YIN7 160 aa24.91■■□□□ 1.58
LRRK1-210ENST00000534045 GIGYF1O75420 1035 aaPredicted RBP24.91■■□□□ 1.58
LRRK1-210ENST00000534045 CAMTA2O94983 1202 aa24.91■■□□□ 1.58
LRRK1-210ENST00000534045 RUNDC1Q96C34 613 aa24.91■■□□□ 1.58
LRRK1-210ENST00000534045 EIF4A1P60842 406 aaKnown RBP24.9■■□□□ 1.58
LRRK1-210ENST00000534045 GPBP1L1Q9HC44 474 aaPredicted RBP24.9■■□□□ 1.58
LRRK1-210ENST00000534045 RRP7AQ9Y3A4 280 aaKnown RBP24.9■■□□□ 1.58
LRRK1-210ENST00000534045 CLEC4GQ6UXB4 293 aa24.89■■□□□ 1.58
LRRK1-210ENST00000534045 C2CD5Q86YS7 1000 aa24.89■■□□□ 1.58
LRRK1-210ENST00000534045 NGEFQ8N5V2 710 aa24.89■■□□□ 1.58
LRRK1-210ENST00000534045 ZNF526Q8TF50 670 aaPredicted RBP24.89■■□□□ 1.58
LRRK1-210ENST00000534045 ADAMTS8Q9UP79 889 aa24.89■■□□□ 1.58
LRRK1-210ENST00000534045 PDE6BP35913 854 aa24.88■■□□□ 1.57
LRRK1-210ENST00000534045 CARMIL3Q8ND23 1372 aa24.88■■□□□ 1.57
LRRK1-210ENST00000534045 BCORQ6W2J9 1755 aa24.88■■□□□ 1.57
LRRK1-210ENST00000534045 NBPF26B4DH59 902 aa24.87■■□□□ 1.57
LRRK1-210ENST00000534045 ST5P78524 1137 aa24.87■■□□□ 1.57
LRRK1-210ENST00000534045 NBPF10Q6P3W6 841 aaKnown RBP24.87■■□□□ 1.57
LRRK1-210ENST00000534045 NBPF15Q8N660 670 aa24.87■■□□□ 1.57
LRRK1-210ENST00000534045 CNBD1Q8NA66 436 aa24.87■■□□□ 1.57
LRRK1-210ENST00000534045 PDZRN3Q9UPQ7 1066 aa24.87■■□□□ 1.57
LRRK1-210ENST00000534045 ATP10DQ9P241 1426 aa24.86■■□□□ 1.57
LRRK1-210ENST00000534045 TTLL6Q8N841 843 aa24.86■■□□□ 1.57
LRRK1-210ENST00000534045 BRIP1Q9BX63 1249 aa24.86■■□□□ 1.57
LRRK1-210ENST00000534045 CCDC24Q8N4L8 307 aa24.85■■□□□ 1.57
LRRK1-210ENST00000534045 ZNF622Q969S3 477 aaKnown RBP eCLIP24.85■■□□□ 1.57
LRRK1-210ENST00000534045 BABAM1Q9NWV8 329 aa24.85■■□□□ 1.57
LRRK1-210ENST00000534045 LAS1LQ9Y4W2 734 aaKnown RBP24.85■■□□□ 1.57
LRRK1-210ENST00000534045 ARFGEF1Q9Y6D6 1849 aa24.84■■□□□ 1.57
LRRK1-210ENST00000534045 NRXN2Q9P2S2 1712 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms