RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 ZBTB1Q9Y2K1 713 aa22.75■■□□□ 1.23
CAPRIN1-216ENST00000534042 COL15A1P39059 1388 aa22.75■■□□□ 1.23
CAPRIN1-216ENST00000534042 NPC1L1Q9UHC9 1359 aa22.75■■□□□ 1.23
CAPRIN1-216ENST00000534042 U2SURPO15042 1029 aaKnown RBP22.74■■□□□ 1.23
CAPRIN1-216ENST00000534042 C9orf131Q5VYM1 1079 aa22.74■■□□□ 1.23
CAPRIN1-216ENST00000534042 NFIXQ14938 502 aa22.73■■□□□ 1.23
CAPRIN1-216ENST00000534042 TTC5Q8N0Z6 440 aa22.73■■□□□ 1.23
CAPRIN1-216ENST00000534042 CEP350Q5VT06 3117 aa22.73■■□□□ 1.23
CAPRIN1-216ENST00000534042 AFDNP55196 1824 aaKnown RBP22.71■■□□□ 1.23
CAPRIN1-216ENST00000534042 TOMM70O94826 608 aa22.71■■□□□ 1.23
CAPRIN1-216ENST00000534042 CANXP27824 592 aaKnown RBP22.71■■□□□ 1.23
CAPRIN1-216ENST00000534042 GAS2L2Q8NHY3 880 aa22.71■■□□□ 1.23
CAPRIN1-216ENST00000534042 NMRK2Q9NPI5 230 aa22.71■■□□□ 1.23
CAPRIN1-216ENST00000534042 COL3A1P02461 1466 aaPredicted RBP22.71■■□□□ 1.23
CAPRIN1-216ENST00000534042 UBR2Q8IWV8 1755 aa22.71■■□□□ 1.23
CAPRIN1-216ENST00000534042 GNAT3A8MTJ3 354 aa22.7■■□□□ 1.22
CAPRIN1-216ENST00000534042 STARD3NLO95772 234 aa22.7■■□□□ 1.22
CAPRIN1-216ENST00000534042 TEFQ10587 303 aa22.7■■□□□ 1.22
CAPRIN1-216ENST00000534042 SERPINB2P05120 415 aa22.69■■□□□ 1.22
CAPRIN1-216ENST00000534042 BCL2L12Q9HB09 334 aa22.69■■□□□ 1.22
CAPRIN1-216ENST00000534042 RNF181Q9P0P0 153 aa22.69■■□□□ 1.22
CAPRIN1-216ENST00000534042 IL17REQ8NFR9 667 aa22.68■■□□□ 1.22
CAPRIN1-216ENST00000534042 SBF1O95248 1867 aa22.67■■□□□ 1.22
CAPRIN1-216ENST00000534042 A0A087WZG4 1122 aa22.67■■□□□ 1.22
CAPRIN1-216ENST00000534042 ZNF496Q96IT1 587 aaPredicted RBP22.67■■□□□ 1.22
CAPRIN1-216ENST00000534042 NRXN2Q9P2S2 1712 aa22.66■■□□□ 1.22
CAPRIN1-216ENST00000534042 APLP1P51693 650 aa22.66■■□□□ 1.22
CAPRIN1-216ENST00000534042 EIF5P55010 431 aaKnown RBP22.66■■□□□ 1.22
CAPRIN1-216ENST00000534042 ZNF790Q6PG37 636 aa22.66■■□□□ 1.22
CAPRIN1-216ENST00000534042 TEX13AQ9BXU3 409 aaPredicted RBP22.66■■□□□ 1.22
CAPRIN1-216ENST00000534042 HEG1Q9ULI3 1381 aa22.65■■□□□ 1.22
CAPRIN1-216ENST00000534042 KDM2BQ8NHM5 1336 aa22.65■■□□□ 1.22
CAPRIN1-216ENST00000534042 BICDL1Q6ZP65 573 aa22.65■■□□□ 1.22
CAPRIN1-216ENST00000534042 C16orf71Q8IYS4 520 aaPredicted RBP22.65■■□□□ 1.22
CAPRIN1-216ENST00000534042 CFAP53Q96M91 514 aa22.65■■□□□ 1.22
CAPRIN1-216ENST00000534042 SIPA1L3O60292 1781 aaPredicted RBP22.63■■□□□ 1.21
CAPRIN1-216ENST00000534042 PRKAR2BP31323 418 aa22.62■■□□□ 1.21
CAPRIN1-216ENST00000534042 C2CD5Q86YS7 1000 aa22.62■■□□□ 1.21
CAPRIN1-216ENST00000534042 TTLL6Q8N841 843 aa22.62■■□□□ 1.21
CAPRIN1-216ENST00000534042 RBM46Q8TBY0 533 aaKnown RBP22.62■■□□□ 1.21
CAPRIN1-216ENST00000534042 FMNL2Q96PY5 1086 aa22.62■■□□□ 1.21
CAPRIN1-216ENST00000534042 ZNF330Q9Y3S2 320 aaPredicted RBP22.62■■□□□ 1.21
CAPRIN1-216ENST00000534042 H0YIN7 160 aa22.61■■□□□ 1.21
CAPRIN1-216ENST00000534042 NUDCQ9Y266 331 aa22.61■■□□□ 1.21
CAPRIN1-216ENST00000534042 DLEC1Q9Y238 1755 aa22.61■■□□□ 1.21
CAPRIN1-216ENST00000534042 IL6STP40189 918 aaPredicted RBP22.6■■□□□ 1.21
CAPRIN1-216ENST00000534042 RASSF7Q02833 373 aa22.6■■□□□ 1.21
CAPRIN1-216ENST00000534042 TBC1D9BQ66K14 1250 aa22.6■■□□□ 1.21
CAPRIN1-216ENST00000534042 NPM2Q86SE8 214 aaKnown RBP22.6■■□□□ 1.21
CAPRIN1-216ENST00000534042 PHACTR3Q96KR7 559 aa22.6■■□□□ 1.21
CAPRIN1-216ENST00000534042 RSPH6AQ9H0K4 717 aa22.6■■□□□ 1.21
CAPRIN1-216ENST00000534042 TBC1D2BQ9UPU7 963 aa22.6■■□□□ 1.21
CAPRIN1-216ENST00000534042 CEMIPQ8WUJ3 1361 aa22.6■■□□□ 1.21
CAPRIN1-216ENST00000534042 BTBD11A6QL63 1104 aa22.59■■□□□ 1.21
CAPRIN1-216ENST00000534042 IFFO2Q5TF58 517 aa22.59■■□□□ 1.21
CAPRIN1-216ENST00000534042 RRAGCQ9HB90 399 aa22.59■■□□□ 1.21
CAPRIN1-216ENST00000534042 LMNB1P20700 586 aa22.58■■□□□ 1.21
CAPRIN1-216ENST00000534042 CARMIL3Q8ND23 1372 aa22.58■■□□□ 1.21
CAPRIN1-216ENST00000534042 A1BGP04217 495 aa22.57■■□□□ 1.2
CAPRIN1-216ENST00000534042 PDZRN3Q9UPQ7 1066 aa22.57■■□□□ 1.2
CAPRIN1-216ENST00000534042 CCDC88AQ3V6T2 1871 aa22.57■■□□□ 1.2
CAPRIN1-216ENST00000534042 ZC3H4Q9UPT8 1303 aaKnown RBP22.57■■□□□ 1.2
CAPRIN1-216ENST00000534042 KCNQ3O43525 872 aa22.56■■□□□ 1.2
CAPRIN1-216ENST00000534042 FSTL1Q12841 308 aa22.56■■□□□ 1.2
CAPRIN1-216ENST00000534042 SCN7AQ01118 1682 aa22.55■■□□□ 1.2
CAPRIN1-216ENST00000534042 U2AF1L5P0DN76 240 aaPredicted RBP22.55■■□□□ 1.2
CAPRIN1-216ENST00000534042 PDE6BP35913 854 aa22.55■■□□□ 1.2
CAPRIN1-216ENST00000534042 U2AF1Q01081 240 aaKnown RBP eCLIP22.55■■□□□ 1.2
CAPRIN1-216ENST00000534042 ZNF622Q969S3 477 aaKnown RBP eCLIP22.55■■□□□ 1.25e-13■■□□□ 13.4
CAPRIN1-216ENST00000534042 BRIP1Q9BX63 1249 aa22.55■■□□□ 1.2
CAPRIN1-216ENST00000534042 TNRC6CQ9HCJ0 1690 aaKnown RBP22.55■■□□□ 1.2
CAPRIN1-216ENST00000534042 ANKRD31Q8N7Z5 1873 aa22.54■■□□□ 1.2
CAPRIN1-216ENST00000534042 PPP2R1AP30153 589 aa22.54■■□□□ 1.2
CAPRIN1-216ENST00000534042 PRR5LQ6MZQ0 368 aa22.54■■□□□ 1.2
CAPRIN1-216ENST00000534042 DNAJC5GQ8N7S2 189 aa22.54■■□□□ 1.2
CAPRIN1-216ENST00000534042 RTF1Q92541 710 aaKnown RBP22.54■■□□□ 1.2
CAPRIN1-216ENST00000534042 CCDC24Q8N4L8 307 aa22.53■■□□□ 1.2
CAPRIN1-216ENST00000534042 SETDB2Q96T68 719 aa22.53■■□□□ 1.2
CAPRIN1-216ENST00000534042 NPHP1O15259 732 aa22.52■■□□□ 1.2
CAPRIN1-216ENST00000534042 CAMTA2O94983 1202 aa22.52■■□□□ 1.2
CAPRIN1-216ENST00000534042 PRELPP51888 382 aa22.52■■□□□ 1.2
CAPRIN1-216ENST00000534042 DZIP3Q86Y13 1208 aaKnown RBP22.52■■□□□ 1.2
CAPRIN1-216ENST00000534042 USP16Q9Y5T5 823 aa22.52■■□□□ 1.2
CAPRIN1-216ENST00000534042 WDR90Q96KV7 1748 aa22.51■■□□□ 1.19
CAPRIN1-216ENST00000534042 GLTPD2A6NH11 291 aa22.51■■□□□ 1.19
CAPRIN1-216ENST00000534042 NFKBIEO00221 500 aa22.5■■□□□ 1.19
CAPRIN1-216ENST00000534042 MCM10Q7L590 875 aa22.5■■□□□ 1.19
CAPRIN1-216ENST00000534042 CNBD1Q8NA66 436 aa22.5■■□□□ 1.19
CAPRIN1-216ENST00000534042 SMC1BQ8NDV3 1235 aa22.5■■□□□ 1.19
CAPRIN1-216ENST00000534042 C21orf2O43822 256 aa22.49■■□□□ 1.19
CAPRIN1-216ENST00000534042 SNRPA1P09661 255 aaKnown RBP22.49■■□□□ 1.19
CAPRIN1-216ENST00000534042 VEGFAP15692 232 aaPredicted RBP22.49■■□□□ 1.19
CAPRIN1-216ENST00000534042 PIP4K2AP48426 406 aaPredicted RBP22.49■■□□□ 1.19
CAPRIN1-216ENST00000534042 ZNF219Q9P2Y4 722 aaPredicted RBP22.49■■□□□ 1.19
CAPRIN1-216ENST00000534042 ST5P78524 1137 aa22.48■■□□□ 1.19
CAPRIN1-216ENST00000534042 PRAMEF22A3QJZ6 481 aa22.47■■□□□ 1.19
CAPRIN1-216ENST00000534042 HTATSF1O43719 755 aaKnown RBP22.47■■□□□ 1.19
CAPRIN1-216ENST00000534042 HTRA3P83110 453 aa22.47■■□□□ 1.19
CAPRIN1-216ENST00000534042 CNKSR1Q969H4 720 aa22.47■■□□□ 1.19
CAPRIN1-216ENST00000534042 COL11A2P13942 1736 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms